RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 ERLIN2O94905 339 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 H6PDO95479 791 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 IGKV1-13P0DP09 117 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 PGAM1P18669 254 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 NPY1RP25929 384 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 AQP2P41181 271 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 NAA10P41227 235 aaPredicted RBP2.72□□□□□ -1.97
PRKDC-205ENST00000535375 SSR4P51571 173 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 SUB1P53999 127 aaKnown RBP eCLIP2.72□□□□□ -1.97
PRKDC-205ENST00000535375 UGT2B15P54855 530 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 RAB10P61026 200 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 ZNF92Q03936 586 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 MRPL23Q16540 153 aaKnown RBP2.72□□□□□ -1.97
PRKDC-205ENST00000535375 SGCAQ16586 387 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 H2AFVQ71UI9 128 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 AKNAQ7Z591 1439 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 HMGN2P46Q86SG4 172 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 THOC6Q86W42 341 aaKnown RBP2.72□□□□□ -1.97
PRKDC-205ENST00000535375 OFCC1Q8IZS5 231 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 PGAM4Q8N0Y7 254 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 PQLC3Q8N755 202 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 OR2G2Q8NGZ5 317 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 ACTRT1Q8TDG2 376 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 TMEM54Q969K7 222 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 DUS3LQ96G46 650 aaKnown RBP2.72□□□□□ -1.97
PRKDC-205ENST00000535375 ATP5SQ99766 215 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 C11orf70Q9BRQ4 267 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 ZNF2Q9BSG1 426 aaPredicted RBP2.72□□□□□ -1.97
PRKDC-205ENST00000535375 C20orf24Q9BUV8 137 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 UGT1A7Q9HAW7 530 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 UGT1A10Q9HAW8 530 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 UGT1A8Q9HAW9 530 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 FGF20Q9NP95 211 aaPredicted RBP2.72□□□□□ -1.97
PRKDC-205ENST00000535375 LSM7Q9UK45 103 aaKnown RBP2.72□□□□□ -1.97
PRKDC-205ENST00000535375 PITPNC1Q9UKF7 332 aa2.72□□□□□ -1.97
PRKDC-205ENST00000535375 KIF26AQ9ULI4 1882 aaPredicted RBP2.72□□□□□ -1.97
PRKDC-205ENST00000535375 TRIOBPQ9H2D6 2365 aa2.71□□□□□ -1.98
PRKDC-205ENST00000535375 TRBV9A0A0B4J1U6 114 aa2.71□□□□□ -1.98
PRKDC-205ENST00000535375 SMCO3A2RU48 225 aa2.71□□□□□ -1.98
PRKDC-205ENST00000535375 WRBO00258 174 aa2.71□□□□□ -1.98
PRKDC-205ENST00000535375 FGGP02679 453 aa2.71□□□□□ -1.98
PRKDC-205ENST00000535375 CSF3P09919 207 aa2.71□□□□□ -1.98
PRKDC-205ENST00000535375 OR8G3PP0DMU2 310 aa2.71□□□□□ -1.98
PRKDC-205ENST00000535375 ZNF14P17017 642 aaPredicted RBP2.71□□□□□ -1.98
PRKDC-205ENST00000535375 FOXN2P32314 431 aa2.71□□□□□ -1.98
PRKDC-205ENST00000535375 TMED10P49755 219 aaKnown RBP2.71□□□□□ -1.98
PRKDC-205ENST00000535375 FGF8P55075 233 aaPredicted RBP2.71□□□□□ -1.98
PRKDC-205ENST00000535375 RGS8P57771 180 aaPredicted RBP2.71□□□□□ -1.98
PRKDC-205ENST00000535375 MERTKQ12866 999 aa2.71□□□□□ -1.98
PRKDC-205ENST00000535375 FZD2Q14332 565 aa2.71□□□□□ -1.98
PRKDC-205ENST00000535375 HSDL1Q3SXM5 330 aa2.71□□□□□ -1.98
PRKDC-205ENST00000535375 ZBED5Q49AG3 693 aa2.71□□□□□ -1.98
PRKDC-205ENST00000535375 CLEC2AQ6UVW9 174 aa2.71□□□□□ -1.98
PRKDC-205ENST00000535375 CENPQQ7L2Z9 268 aaPredicted RBP2.71□□□□□ -1.98
PRKDC-205ENST00000535375 IQCKQ8N0W5 287 aa2.71□□□□□ -1.98
PRKDC-205ENST00000535375 PDIK1LQ8N165 341 aa2.71□□□□□ -1.98
PRKDC-205ENST00000535375 FAM81AQ8TBF8 368 aa2.71□□□□□ -1.98
PRKDC-205ENST00000535375 SYNPRQ8TBG9 265 aa2.71□□□□□ -1.98
PRKDC-205ENST00000535375 CD300LFQ8TDQ1 290 aa2.71□□□□□ -1.98
PRKDC-205ENST00000535375 RARRES2Q99969 163 aa2.71□□□□□ -1.98
PRKDC-205ENST00000535375 TMEM165Q9HC07 324 aa2.71□□□□□ -1.98
PRKDC-205ENST00000535375 SLCO1B3Q9NPD5 702 aa2.71□□□□□ -1.98
PRKDC-205ENST00000535375 CTPS2Q9NRF8 586 aa2.71□□□□□ -1.98
PRKDC-205ENST00000535375 DDX18Q9NVP1 670 aaKnown RBP2.71□□□□□ -1.98
PRKDC-205ENST00000535375 GCNT4Q9P109 453 aa2.71□□□□□ -1.98
PRKDC-205ENST00000535375 PACSIN2Q9UNF0 486 aaPredicted RBP2.71□□□□□ -1.98
PRKDC-205ENST00000535375 MSH6P52701 1360 aa2.71□□□□□ -1.98
PRKDC-205ENST00000535375 NFASCO94856 1347 aa2.7□□□□□ -1.98
PRKDC-205ENST00000535375 PHLPP2Q6ZVD8 1323 aa2.7□□□□□ -1.98
PRKDC-205ENST00000535375 GOLGA6L7A0A1B0GV03 622 aa2.7□□□□□ -1.98
PRKDC-205ENST00000535375 A0A1B0GVI7 797 aa2.7□□□□□ -1.98
PRKDC-205ENST00000535375 A0A1W2PP18 115 aa2.7□□□□□ -1.98
PRKDC-205ENST00000535375 SIRPB1O00241 398 aa2.7□□□□□ -1.98
PRKDC-205ENST00000535375 NDUFAB1O14561 156 aa2.7□□□□□ -1.98
PRKDC-205ENST00000535375 CASQ2O14958 399 aaPredicted RBP2.7□□□□□ -1.98
PRKDC-205ENST00000535375 CASC3O15234 703 aaKnown RBP2.7□□□□□ -1.98
PRKDC-205ENST00000535375 EIF3HO15372 352 aaKnown RBP eCLIP2.7□□□□□ -1.984e-7■■■□□ 15.9
PRKDC-205ENST00000535375 EEDO75530 441 aaKnown RBP2.7□□□□□ -1.98
PRKDC-205ENST00000535375 ZDHHC11BP0C7U3 371 aa2.7□□□□□ -1.98
PRKDC-205ENST00000535375 GKN3PP0CG01 181 aa2.7□□□□□ -1.98
PRKDC-205ENST00000535375 IGHV3-43DP0DP04 118 aa2.7□□□□□ -1.98
PRKDC-205ENST00000535375 FOLR1P15328 257 aa2.7□□□□□ -1.98
PRKDC-205ENST00000535375 MUC1P15941 1255 aaPredicted RBP2.7□□□□□ -1.98
PRKDC-205ENST00000535375 ZNF24P17028 368 aa2.7□□□□□ -1.98
PRKDC-205ENST00000535375 RRM2P31350 389 aa2.7□□□□□ -1.98
PRKDC-205ENST00000535375 SPAG1Q07617 926 aa2.7□□□□□ -1.98
PRKDC-205ENST00000535375 MAB21L1Q13394 359 aa2.7□□□□□ -1.98
PRKDC-205ENST00000535375 IL18Q14116 193 aa2.7□□□□□ -1.98
PRKDC-205ENST00000535375 C9orf135Q5VTT2 229 aa2.7□□□□□ -1.98
PRKDC-205ENST00000535375 C22orf42Q6IC83 251 aa2.7□□□□□ -1.98
PRKDC-205ENST00000535375 LUZP2Q86TE4 346 aa2.7□□□□□ -1.98
PRKDC-205ENST00000535375 HSD17B11Q8NBQ5 300 aa2.7□□□□□ -1.98
PRKDC-205ENST00000535375 OR4A4PQ8NGN8 299 aa2.7□□□□□ -1.98
PRKDC-205ENST00000535375 RHEBL1Q8TAI7 183 aa2.7□□□□□ -1.98
PRKDC-205ENST00000535375 AGR3Q8TD06 166 aa2.7□□□□□ -1.98
PRKDC-205ENST00000535375 CCDC126Q96EE4 140 aa2.7□□□□□ -1.98
PRKDC-205ENST00000535375 SLC29A1Q99808 456 aa2.7□□□□□ -1.98
PRKDC-205ENST00000535375 SH3GL3Q99963 347 aa2.7□□□□□ -1.98
PRKDC-205ENST00000535375 BPIFA3Q9BQP9 254 aa2.7□□□□□ -1.98
PRKDC-205ENST00000535375 NOX3Q9HBY0 568 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms