RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	SMAD5-AS1	Q9Y6J3	95 aa		3.74	□□□□□ -1.81
ATM-223	ENST00000533979	TP53BP1	Q12888	1972 aa	Predicted RBP	3.74	□□□□□ -1.81
ATM-223	ENST00000533979	NUP98	P52948	1817 aa		3.74	□□□□□ -1.81
ATM-223	ENST00000533979	ZDBF2	Q9HCK1	2354 aa		3.74	□□□□□ -1.81
ATM-223	ENST00000533979	LAMA2	P24043	3122 aa	Known RBP	3.73	□□□□□ -1.81
ATM-223	ENST00000533979	TRANK1	O15050	2925 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979		A0A087WW49	117 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	GOLGA8Q	A0A0J9YX86	632 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979		A0A1W2PRD5	423 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	TMEM120B	A0PK00	339 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	BCLAF3	A2AJT9	711 aa	Known RBP	3.73	□□□□□ -1.81
ATM-223	ENST00000533979	OR5B21	A6NL26	309 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	GOLGA8J	A6NMD2	632 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	GOSR2	O14653	212 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	RAD51B	O15315	384 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	OXSR1	O95747	527 aa	Predicted RBP	3.73	□□□□□ -1.81
ATM-223	ENST00000533979	IGHV3-9	P01782	118 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	HLA-H	P01893	362 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	IFNW1	P05000	195 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	UBTFL1	P0CB47	393 aa	Predicted RBP	3.73	□□□□□ -1.81
ATM-223	ENST00000533979	GOLGA8H	P0CJ92	632 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	ABO	P16442	354 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	HOXB8	P17481	243 aa	Predicted RBP	3.73	□□□□□ -1.81
ATM-223	ENST00000533979	IDS	P22304	550 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	OPRL1	P41146	370 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	YAP1	P46937	504 aa	Known RBP	3.73	□□□□□ -1.81
ATM-223	ENST00000533979	RGR	P47804	291 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	ATP4B	P51164	291 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	VLDLR	P98155	873 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	IL18R1	Q13478	541 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	OR5I1	Q13606	314 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	CYTH1	Q15438	398 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	VAMP3	Q15836	100 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	C18orf21	Q32NC0	220 aa	Predicted RBP	3.73	□□□□□ -1.81
ATM-223	ENST00000533979	SLC22A6	Q4U2R8	563 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	ZNF57	Q68EA5	555 aa	Predicted RBP	3.73	□□□□□ -1.81
ATM-223	ENST00000533979	SPECC1L	Q69YQ0	1117 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	REP15	Q6BDI9	236 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	ZNF836	Q6ZNA1	936 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	FRRS1	Q6ZNA5	592 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	TPGS1	Q6ZTW0	290 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	FRA10AC1	Q70Z53	315 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	TRMT10C	Q7L0Y3	403 aa	Known RBP	3.73	□□□□□ -1.81
ATM-223	ENST00000533979	SNX20	Q7Z614	316 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	AKAP14	Q86UN6	197 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	LRRC6	Q86X45	466 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	CDKL3	Q8IVW4	592 aa	Predicted RBP	3.73	□□□□□ -1.81
ATM-223	ENST00000533979	ZNF100	Q8IYN0	542 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	LYG1	Q8N1E2	194 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	MTURN	Q8N3F0	131 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	TTC29	Q8NA56	475 aa	Predicted RBP	3.73	□□□□□ -1.81
ATM-223	ENST00000533979	OR52B6	Q8NGF0	335 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	CA5BP1	Q8WTZ4	195 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	GLT1D1	Q96MS3	346 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	FOXN4	Q96NZ1	517 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	OXGR1	Q96P68	337 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	ZNF317	Q96PQ6	595 aa	Predicted RBP	3.73	□□□□□ -1.81
ATM-223	ENST00000533979	ALS2CR12	Q96Q35	445 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	ATOH8	Q96SQ7	321 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	CYP2S1	Q96SQ9	504 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	ECSIT	Q9BQ95	431 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	UCK2	Q9BZX2	261 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	RBKS	Q9H477	322 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	ZNF385D	Q9H6B1	395 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	PRSS16	Q9NQE7	514 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	WARS2	Q9UGM6	360 aa	Known RBP	3.73	□□□□□ -1.81
ATM-223	ENST00000533979	ZNF229	Q9UJW7	825 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	GGA2	Q9UJY4	613 aa		3.73	□□□□□ -1.81
ATM-223	ENST00000533979	TDRD15	B5MCY1	1934 aa	Known RBP	3.73	□□□□□ -1.81
ATM-223	ENST00000533979	BRCA2	P51587	3418 aa		3.72	□□□□□ -1.81
ATM-223	ENST00000533979	RIC1	Q4ADV7	1423 aa		3.72	□□□□□ -1.81
ATM-223	ENST00000533979	ARFGEF2	Q9Y6D5	1785 aa		3.72	□□□□□ -1.81
ATM-223	ENST00000533979		A0A0J9YWU9	116 aa		3.72	□□□□□ -1.81
ATM-223	ENST00000533979		A8MUA0	341 aa		3.72	□□□□□ -1.81
ATM-223	ENST00000533979	ARHGEF33	A8MVX0	844 aa		3.72	□□□□□ -1.81
ATM-223	ENST00000533979	ERVV-1	B6SEH8	477 aa		3.72	□□□□□ -1.81
ATM-223	ENST00000533979		K7EQG2	157 aa		3.72	□□□□□ -1.81
ATM-223	ENST00000533979	IDH3B	O43837	385 aa		3.72	□□□□□ -1.81
ATM-223	ENST00000533979	CDK14	O94921	469 aa		3.72	□□□□□ -1.81
ATM-223	ENST00000533979	CCNB2	O95067	398 aa		3.72	□□□□□ -1.81
ATM-223	ENST00000533979	CD55	P08174	381 aa		3.72	□□□□□ -1.81
ATM-223	ENST00000533979	HOXD4	P09016	255 aa	Predicted RBP	3.72	□□□□□ -1.81
ATM-223	ENST00000533979	HSD17B1	P14061	328 aa		3.72	□□□□□ -1.81
ATM-223	ENST00000533979	PMCH	P20382	165 aa		3.72	□□□□□ -1.81
ATM-223	ENST00000533979	BCL3	P20749	454 aa		3.72	□□□□□ -1.81
ATM-223	ENST00000533979	CFL1	P23528	166 aa	Known RBP	3.72	□□□□□ -1.81
ATM-223	ENST00000533979	IL12A	P29459	219 aa		3.72	□□□□□ -1.81
ATM-223	ENST00000533979	PDHA2	P29803	388 aa		3.72	□□□□□ -1.81
ATM-223	ENST00000533979	UGT1A3	P35503	534 aa		3.72	□□□□□ -1.81
ATM-223	ENST00000533979	DDOST	P39656	456 aa		3.72	□□□□□ -1.81
ATM-223	ENST00000533979	ELK3	P41970	407 aa		3.72	□□□□□ -1.81
ATM-223	ENST00000533979	SLC26A2	P50443	739 aa		3.72	□□□□□ -1.81
ATM-223	ENST00000533979	HNRNPA3	P51991	378 aa	Known RBP	3.72	□□□□□ -1.81
ATM-223	ENST00000533979	ERVK-25	P63136	954 aa		3.72	□□□□□ -1.81
ATM-223	ENST00000533979	LRRC63	Q05C16	580 aa		3.72	□□□□□ -1.81
ATM-223	ENST00000533979	CALCOCO2	Q13137	446 aa		3.72	□□□□□ -1.81
ATM-223	ENST00000533979	OXA1L	Q15070	435 aa		3.72	□□□□□ -1.81
ATM-223	ENST00000533979	LPAL2	Q16609	132 aa		3.72	□□□□□ -1.81
ATM-223	ENST00000533979	PPM1L	Q5SGD2	360 aa		3.72	□□□□□ -1.81
ATM-223	ENST00000533979	OR52E8	Q6IFG1	317 aa		3.72	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms