RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 AQP11Q8NBQ7 271 aa11.59□□□□□ -0.55
CAPN1-227ENST00000533909 FGFBP3Q8TAT2 258 aa11.59□□□□□ -0.55
CAPN1-227ENST00000533909 CANT1Q8WVQ1 401 aa11.59□□□□□ -0.55
CAPN1-227ENST00000533909 BDH2Q9BUT1 245 aa11.59□□□□□ -0.55
CAPN1-227ENST00000533909 TMUB1Q9BVT8 246 aa11.59□□□□□ -0.55
CAPN1-227ENST00000533909 PLK3Q9H4B4 646 aa11.59□□□□□ -0.55
CAPN1-227ENST00000533909 ZNF442Q9H7R0 627 aa11.59□□□□□ -0.55
CAPN1-227ENST00000533909 FBXO9Q9UK97 447 aaPredicted RBP11.59□□□□□ -0.55
CAPN1-227ENST00000533909 POMPQ9Y244 141 aa11.59□□□□□ -0.55
CAPN1-227ENST00000533909 CMAHPQ9Y471 501 aa11.59□□□□□ -0.55
CAPN1-227ENST00000533909 TIMM10BQ9Y5J6 103 aa11.59□□□□□ -0.55
CAPN1-227ENST00000533909 CDH10Q9Y6N8 788 aa11.59□□□□□ -0.55
CAPN1-227ENST00000533909 MED13LQ71F56 2210 aa11.58□□□□□ -0.56
CAPN1-227ENST00000533909 IGKV1D-43A0A0B4J1Z2 117 aa11.58□□□□□ -0.56
CAPN1-227ENST00000533909 IMPA2O14732 288 aa11.58□□□□□ -0.56
CAPN1-227ENST00000533909 IDH3BO43837 385 aa11.58□□□□□ -0.56
CAPN1-227ENST00000533909 IGHV4-39P01824 125 aa11.58□□□□□ -0.56
CAPN1-227ENST00000533909 CST2P09228 141 aa11.58□□□□□ -0.56
CAPN1-227ENST00000533909 ZNF32P17041 273 aa11.58□□□□□ -0.56
CAPN1-227ENST00000533909 GSTM3P21266 225 aa11.58□□□□□ -0.56
CAPN1-227ENST00000533909 CCNOP22674 350 aa11.58□□□□□ -0.56
CAPN1-227ENST00000533909 CRABP1P29762 137 aa11.58□□□□□ -0.56
CAPN1-227ENST00000533909 SELENOVP59797 346 aa11.58□□□□□ -0.56
CAPN1-227ENST00000533909 ADIPOQQ15848 244 aa11.58□□□□□ -0.56
CAPN1-227ENST00000533909 CLEC12BQ2HXU8 276 aa11.58□□□□□ -0.56
CAPN1-227ENST00000533909 CLEC12AQ5QGZ9 265 aa11.58□□□□□ -0.56
CAPN1-227ENST00000533909 LEG1Q6P5S2 330 aa11.58□□□□□ -0.56
CAPN1-227ENST00000533909 PGM2L1Q6PCE3 622 aa11.58□□□□□ -0.56
CAPN1-227ENST00000533909 UNQ6126/PRO20091Q6UXV3 157 aa11.58□□□□□ -0.56
CAPN1-227ENST00000533909 ZNF620Q6ZNG0 422 aa11.58□□□□□ -0.56
CAPN1-227ENST00000533909 GLB1L2Q8IW92 636 aa11.58□□□□□ -0.56
CAPN1-227ENST00000533909 ICA1LQ8NDH6 482 aa11.58□□□□□ -0.56
CAPN1-227ENST00000533909 OR4C15Q8NGM1 316 aa11.58□□□□□ -0.56
CAPN1-227ENST00000533909 NABP1Q96AH0 204 aa11.58□□□□□ -0.56
CAPN1-227ENST00000533909 FOXN4Q96NZ1 517 aa11.58□□□□□ -0.56
CAPN1-227ENST00000533909 VRK1Q99986 396 aaPredicted RBP11.58□□□□□ -0.56
CAPN1-227ENST00000533909 CADM1Q9BY67 442 aaKnown RBP11.58□□□□□ -0.56
CAPN1-227ENST00000533909 DYNLRB1Q9NP97 96 aa11.58□□□□□ -0.56
CAPN1-227ENST00000533909 TBC1D23Q9NUY8 699 aa11.58□□□□□ -0.56
CAPN1-227ENST00000533909 VSX1Q9NZR4 365 aaPredicted RBP11.58□□□□□ -0.56
CAPN1-227ENST00000533909 SLC7A8Q9UHI5 535 aa11.58□□□□□ -0.56
CAPN1-227ENST00000533909 POLR1DQ9Y2S0 133 aa11.58□□□□□ -0.56
CAPN1-227ENST00000533909 FKBP7Q9Y680 259 aa11.58□□□□□ -0.56
CAPN1-227ENST00000533909 SETD2Q9BYW2 2564 aaPredicted RBP11.58□□□□□ -0.56
CAPN1-227ENST00000533909 H7C417 338 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 SMAD7O15105 426 aaKnown RBP11.57□□□□□ -0.56
CAPN1-227ENST00000533909 ARPC3O15145 178 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 SSX4O60224 188 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 CIB2O75838 187 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 TXNDC12O95881 172 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 GASTP01350 101 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 LCKP06239 509 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 CCL2P13500 99 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 ZNF35P13682 527 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 FOSL1P15407 271 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 CTLA4P16410 223 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 APEX1P27695 318 aaKnown RBP11.57□□□□□ -0.56
CAPN1-227ENST00000533909 RAD52P43351 418 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 GDI2P50395 445 aaKnown RBP11.57□□□□□ -0.56
CAPN1-227ENST00000533909 ERFP50548 548 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 ARHGDIAP52565 204 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 FXYD6P3P58550 94 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 CBX1P83916 185 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 EFNB3Q15768 340 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 C1orf146Q5VVC0 180 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 C11orf71Q6IPW1 123 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 CLEC2AQ6UVW9 174 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 CCDC121Q6ZUS5 278 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.57□□□□□ -0.56
CAPN1-227ENST00000533909 KRTAP1-3Q8IUG1 177 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 ZNF584Q8IVC4 421 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 OR10G2Q8NGC3 310 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 OR4K13Q8NH42 304 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 GIPC3Q8TF64 312 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 C18orf12Q96KH6 178 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 OR51B6Q9H340 312 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 MMADHCQ9H3L0 296 aaPredicted RBP11.57□□□□□ -0.56
CAPN1-227ENST00000533909 EGLN3Q9H6Z9 239 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 ZNF556Q9HAH1 456 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 EMC7Q9NPA0 242 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 POLE4Q9NR33 117 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 VNN3Q9NY84 501 aa11.57□□□□□ -0.56
CAPN1-227ENST00000533909 EIF3KQ9UBQ5 218 aaKnown RBP11.57□□□□□ -0.56
CAPN1-227ENST00000533909 GDF2Q9UK05 429 aaPredicted RBP11.57□□□□□ -0.56
CAPN1-227ENST00000533909 C5orf49A4QMS7 147 aa11.56□□□□□ -0.56
CAPN1-227ENST00000533909 TRIM64A6NGJ6 449 aa11.56□□□□□ -0.56
CAPN1-227ENST00000533909 TRIM64BA6NI03 449 aa11.56□□□□□ -0.56
CAPN1-227ENST00000533909 H7C1Q1 480 aa11.56□□□□□ -0.56
CAPN1-227ENST00000533909 NDUFS7O75251 213 aa11.56□□□□□ -0.56
CAPN1-227ENST00000533909 FKBP6O75344 327 aa11.56□□□□□ -0.56
CAPN1-227ENST00000533909 MMP7P09237 267 aaPredicted RBP11.56□□□□□ -0.56
CAPN1-227ENST00000533909 FAM157BP0CG42 384 aa11.56□□□□□ -0.56
CAPN1-227ENST00000533909 STOMP27105 288 aa11.56□□□□□ -0.56
CAPN1-227ENST00000533909 GLRXP35754 106 aa11.56□□□□□ -0.56
CAPN1-227ENST00000533909 CDKN2AP42771 156 aaKnown RBP11.56□□□□□ -0.56
CAPN1-227ENST00000533909 SCRN3Q0VDG4 424 aa11.56□□□□□ -0.56
CAPN1-227ENST00000533909 SWI5Q1ZZU3 235 aa11.56□□□□□ -0.56
CAPN1-227ENST00000533909 SLC35F1Q5T1Q4 408 aa11.56□□□□□ -0.56
CAPN1-227ENST00000533909 ARL9Q6T311 187 aa11.56□□□□□ -0.56
CAPN1-227ENST00000533909 RASSF6Q6ZTQ3 369 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms