RNA–Protein interactions for RNA: ENST00000533521.5

BEST1-207, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 1,128 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-207ENST00000533521 C11orf40Q8WZ69 217 aa19.13■□□□□ 0.65
BEST1-207ENST00000533521 NSMAFQ92636 917 aa19.13■□□□□ 0.65
BEST1-207ENST00000533521 CDRT15Q96T59 188 aa19.13■□□□□ 0.65
BEST1-207ENST00000533521 NRIP3Q9NQ35 241 aa19.13■□□□□ 0.65
BEST1-207ENST00000533521 YAE1D1Q9NRH1 226 aa19.13■□□□□ 0.65
BEST1-207ENST00000533521 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.12■□□□□ 0.65
BEST1-207ENST00000533521 C12orf71A8MTZ7 269 aa19.12■□□□□ 0.65
BEST1-207ENST00000533521 XKRYO14609 159 aa19.12■□□□□ 0.65
BEST1-207ENST00000533521 TACSTD2P09758 323 aa19.12■□□□□ 0.65
BEST1-207ENST00000533521 ZNF26P17031 533 aaPredicted RBP19.12■□□□□ 0.65
BEST1-207ENST00000533521 ZNF32P17041 273 aa19.12■□□□□ 0.65
BEST1-207ENST00000533521 STOMP27105 288 aa19.12■□□□□ 0.65
BEST1-207ENST00000533521 FGD3Q5JSP0 725 aa19.12■□□□□ 0.65
BEST1-207ENST00000533521 MEX3DQ86XN8 651 aaKnown RBP19.12■□□□□ 0.65
BEST1-207ENST00000533521 ARHGAP24Q8N264 748 aa19.12■□□□□ 0.65
BEST1-207ENST00000533521 PAQR4Q8N4S7 273 aaPredicted RBP19.12■□□□□ 0.65
BEST1-207ENST00000533521 POM121L2Q96KW2 1035 aa19.12■□□□□ 0.65
BEST1-207ENST00000533521 NSMCE2Q96MF7 247 aa19.12■□□□□ 0.65
BEST1-207ENST00000533521 SLCO1C1Q9NYB5 712 aa19.12■□□□□ 0.65
BEST1-207ENST00000533521 ADAM21Q9UKJ8 722 aa19.12■□□□□ 0.65
BEST1-207ENST00000533521 TIMM10BQ9Y5J6 103 aa19.12■□□□□ 0.65
BEST1-207ENST00000533521 TRBV4-1A0A0J9YWV2 114 aa19.11■□□□□ 0.65
BEST1-207ENST00000533521 SH3PXD2BA1X283 911 aa19.11■□□□□ 0.65
BEST1-207ENST00000533521 PRSS37A4D1T9 235 aa19.11■□□□□ 0.65
BEST1-207ENST00000533521 ARPC2O15144 300 aa19.11■□□□□ 0.65
BEST1-207ENST00000533521 TXNDC12O95881 172 aa19.11■□□□□ 0.65
BEST1-207ENST00000533521 IGHV4-31P0DP07 118 aa19.11■□□□□ 0.65
BEST1-207ENST00000533521 ZNF23P17027 643 aa19.11■□□□□ 0.65
BEST1-207ENST00000533521 MSR1P21757 451 aa19.11■□□□□ 0.65
BEST1-207ENST00000533521 SDHAP31040 664 aa19.11■□□□□ 0.65
BEST1-207ENST00000533521 KLF3P57682 345 aaPredicted RBP19.11■□□□□ 0.65
BEST1-207ENST00000533521 ERVK-25P63136 954 aa19.11■□□□□ 0.65
BEST1-207ENST00000533521 PSG4Q00888 419 aa19.11■□□□□ 0.65
BEST1-207ENST00000533521 RIN1Q13671 783 aa19.11■□□□□ 0.65
BEST1-207ENST00000533521 DPY19L2P2Q6ZN68 376 aa19.11■□□□□ 0.65
BEST1-207ENST00000533521 ADCK1Q86TW2 530 aa19.11■□□□□ 0.65
BEST1-207ENST00000533521 PRIMA1Q86XR5 153 aa19.11■□□□□ 0.65
BEST1-207ENST00000533521 ZCCHC24Q8N2G6 241 aaKnown RBP19.11■□□□□ 0.65
BEST1-207ENST00000533521 SYNPRQ8TBG9 265 aa19.11■□□□□ 0.65
BEST1-207ENST00000533521 MCUR1Q96AQ8 359 aa19.11■□□□□ 0.65
BEST1-207ENST00000533521 FAM46AQ96IP4 442 aaKnown RBP19.11■□□□□ 0.65
BEST1-207ENST00000533521 Q96M85 177 aa19.11■□□□□ 0.65
BEST1-207ENST00000533521 SYT3Q9BQG1 590 aa19.11■□□□□ 0.65
BEST1-207ENST00000533521 IL1RAPQ9NPH3 570 aa19.11■□□□□ 0.65
BEST1-207ENST00000533521 NKIRAS2Q9NYR9 191 aa19.11■□□□□ 0.65
BEST1-207ENST00000533521 ADAM18Q9Y3Q7 739 aa19.11■□□□□ 0.65
BEST1-207ENST00000533521 H3BSA7 217 aa19.1■□□□□ 0.65
BEST1-207ENST00000533521 COX5BP10606 129 aa19.1■□□□□ 0.65
BEST1-207ENST00000533521 TCN1P20061 433 aaPredicted RBP19.1■□□□□ 0.65
BEST1-207ENST00000533521 APEX1P27695 318 aaKnown RBP19.1■□□□□ 0.65
BEST1-207ENST00000533521 LAP3P28838 519 aa19.1■□□□□ 0.65
BEST1-207ENST00000533521 UGT2A3Q6UWM9 527 aa19.1■□□□□ 0.65
BEST1-207ENST00000533521 LRP11Q86VZ4 500 aa19.1■□□□□ 0.65
BEST1-207ENST00000533521 DEFB107AQ8IZN7 70 aa19.1■□□□□ 0.65
BEST1-207ENST00000533521 HPS1Q92902 700 aa19.1■□□□□ 0.65
BEST1-207ENST00000533521 POP5Q969H6 163 aaKnown RBP19.1■□□□□ 0.65
BEST1-207ENST00000533521 RSRC1Q96IZ7 334 aaKnown RBP19.1■□□□□ 0.65
BEST1-207ENST00000533521 ZNF570Q96NI8 536 aa19.1■□□□□ 0.65
BEST1-207ENST00000533521 CCT8L2Q96SF2 557 aa19.1■□□□□ 0.65
BEST1-207ENST00000533521 OR2H1Q9GZK4 316 aa19.1■□□□□ 0.65
BEST1-207ENST00000533521 BPESC1Q9GZL8 116 aa19.1■□□□□ 0.65
BEST1-207ENST00000533521 POLE4Q9NR33 117 aa19.1■□□□□ 0.65
BEST1-207ENST00000533521 VSX1Q9NZR4 365 aaPredicted RBP19.1■□□□□ 0.65
BEST1-207ENST00000533521 EIF3KQ9UBQ5 218 aaKnown RBP19.1■□□□□ 0.65
BEST1-207ENST00000533521 DUSP13Q9UII6 198 aa19.1■□□□□ 0.65
BEST1-207ENST00000533521 AURKCQ9UQB9 309 aa19.1■□□□□ 0.65
BEST1-207ENST00000533521 GADD45GO95257 159 aa19.09■□□□□ 0.65
BEST1-207ENST00000533521 FAM107AO95990 144 aa19.09■□□□□ 0.65
BEST1-207ENST00000533521 IGHV3-13P01766 116 aa19.09■□□□□ 0.65
BEST1-207ENST00000533521 FAM157BP0CG42 384 aa19.09■□□□□ 0.65
BEST1-207ENST00000533521 CCL2P13500 99 aa19.09■□□□□ 0.65
BEST1-207ENST00000533521 TUBG1P23258 451 aa19.09■□□□□ 0.65
BEST1-207ENST00000533521 GDI2P50395 445 aaKnown RBP19.09■□□□□ 0.65
BEST1-207ENST00000533521 ENDOGQ14249 297 aaKnown RBP19.09■□□□□ 0.65
BEST1-207ENST00000533521 GGTLC2Q14390 218 aa19.09■□□□□ 0.65
BEST1-207ENST00000533521 SEC23BQ15437 767 aa19.09■□□□□ 0.65
BEST1-207ENST00000533521 PCGF3Q3KNV8 242 aa19.09■□□□□ 0.65
BEST1-207ENST00000533521 MESTQ5EB52 335 aa19.09■□□□□ 0.65
BEST1-207ENST00000533521 MTX3Q5HYI7 312 aa19.09■□□□□ 0.65
BEST1-207ENST00000533521 CLDN22Q8N7P3 220 aa19.09■□□□□ 0.65
BEST1-207ENST00000533521 WNT5BQ9H1J7 359 aa19.09■□□□□ 0.65
BEST1-207ENST00000533521 MUC13Q9H3R2 512 aa19.09■□□□□ 0.65
BEST1-207ENST00000533521 TUBG2Q9NRH3 451 aa19.09■□□□□ 0.65
BEST1-207ENST00000533521 MYEF2Q9P2K5 600 aaKnown RBP19.09■□□□□ 0.65
BEST1-207ENST00000533521 CDC42EP3Q9UKI2 254 aa19.09■□□□□ 0.65
BEST1-207ENST00000533521 MALRD1Q5VYJ5 2156 aa19.09■□□□□ 0.65
BEST1-207ENST00000533521 LOC100509620A0A075B734 347 aa19.08■□□□□ 0.64
BEST1-207ENST00000533521 IGHV4-61A0A0C4DH41 118 aa19.08■□□□□ 0.64
BEST1-207ENST00000533521 TEX13CA0A0J9YWL9 993 aa19.08■□□□□ 0.64
BEST1-207ENST00000533521 UNC119BA6NIH7 251 aa19.08■□□□□ 0.64
BEST1-207ENST00000533521 IMPA2O14732 288 aa19.08■□□□□ 0.64
BEST1-207ENST00000533521 IFNGR2P38484 337 aa19.08■□□□□ 0.64
BEST1-207ENST00000533521 HMGA2P52926 109 aa19.08■□□□□ 0.64
BEST1-207ENST00000533521 FXYD6P3P58550 94 aa19.08■□□□□ 0.64
BEST1-207ENST00000533521 KRR1Q13601 381 aaKnown RBP19.08■□□□□ 0.64
BEST1-207ENST00000533521 CARTPTQ16568 116 aa19.08■□□□□ 0.64
BEST1-207ENST00000533521 SMARCD3Q6STE5 483 aa19.08■□□□□ 0.64
BEST1-207ENST00000533521 FITM2Q8N6M3 262 aa19.08■□□□□ 0.64
BEST1-207ENST00000533521 RDH5Q92781 318 aa19.08■□□□□ 0.64
BEST1-207ENST00000533521 SNX18Q96RF0 628 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms