RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 ZNF611Q8N823 705 aa10.41□□□□□ -0.74
SSBP3-214ENST00000533209 CYB561A3Q8NBI2 242 aa10.41□□□□□ -0.74
SSBP3-214ENST00000533209 DNAJC9Q8WXX5 260 aa10.41□□□□□ -0.74
SSBP3-214ENST00000533209 FBXO17Q96EF6 278 aa10.41□□□□□ -0.74
SSBP3-214ENST00000533209 RADILQ96JH8 1075 aa10.41□□□□□ -0.74
SSBP3-214ENST00000533209 RACGAP1Q9H0H5 632 aa10.41□□□□□ -0.74
SSBP3-214ENST00000533209 FN3KQ9H479 309 aa10.41□□□□□ -0.74
SSBP3-214ENST00000533209 RERGLQ9H628 205 aa10.41□□□□□ -0.74
SSBP3-214ENST00000533209 S100A14Q9HCY8 104 aa10.41□□□□□ -0.74
SSBP3-214ENST00000533209 EMC7Q9NPA0 242 aa10.41□□□□□ -0.74
SSBP3-214ENST00000533209 RPRD1BQ9NQG5 326 aaKnown RBP10.41□□□□□ -0.74
SSBP3-214ENST00000533209 PAPOLBQ9NRJ5 636 aaKnown RBP10.41□□□□□ -0.74
SSBP3-214ENST00000533209 KIF17Q9P2E2 1029 aa10.41□□□□□ -0.74
SSBP3-214ENST00000533209 KLHL21Q9UJP4 597 aa10.41□□□□□ -0.74
SSBP3-214ENST00000533209 OAZ3Q9UMX2 235 aa10.41□□□□□ -0.74
SSBP3-214ENST00000533209 B9D1Q9UPM9 204 aa10.41□□□□□ -0.74
SSBP3-214ENST00000533209 MOKQ9UQ07 419 aa10.41□□□□□ -0.74
SSBP3-214ENST00000533209 ANKRD17O75179 2603 aaKnown RBP10.4□□□□□ -0.74
SSBP3-214ENST00000533209 CCDC168Q8NDH2 2452 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 IGHV2OR16-5A0A0B4J2B6 119 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 SAC3D1A6NKF1 404 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 E7EQL1 145 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 MITFO75030 526 aaPredicted RBP10.4□□□□□ -0.74
SSBP3-214ENST00000533209 ATE1O95260 518 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 MPZL1O95297 269 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 CRYAAP02489 173 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 SERPINA5P05154 406 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 CD53P19397 219 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 CDK5Q00535 292 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 CRMP1Q14194 572 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 GINS1Q14691 196 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 KCNMB1Q16558 191 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 OTPQ5XKR4 325 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 KDM4DQ6B0I6 523 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 ACSM5Q6NUN0 579 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 SLC27A4Q6P1M0 643 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 TMEM53Q6P2H8 277 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 UGT2A3Q6UWM9 527 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 ZNF584Q8IVC4 421 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 DEPDC4Q8N2C3 294 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 PARP8Q8N3A8 854 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 SLC37A3Q8NCC5 494 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 ICA1LQ8NDH6 482 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 RBM4Q9BWF3 364 aaKnown RBP10.4□□□□□ -0.74
SSBP3-214ENST00000533209 ZNF416Q9BWM5 594 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 NMNAT2Q9BZQ4 307 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 KCNN2Q9H2S1 579 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 RNF121Q9H920 327 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 SRA1Q9HD15 236 aaKnown RBP10.4□□□□□ -0.74
SSBP3-214ENST00000533209 CMC2Q9NRP2 79 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 TMEFF2Q9UIK5 374 aaPredicted RBP10.4□□□□□ -0.74
SSBP3-214ENST00000533209 FBXL3Q9UKT7 428 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 PLEKHA6Q9Y2H5 1048 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 FKBP7Q9Y680 259 aa10.4□□□□□ -0.74
SSBP3-214ENST00000533209 RIIAD1A6NNX1 92 aa10.39□□□□□ -0.75
SSBP3-214ENST00000533209 GPANK1O95872 356 aa10.39□□□□□ -0.75
SSBP3-214ENST00000533209 RAF1P04049 648 aa10.39□□□□□ -0.75
SSBP3-214ENST00000533209 DANCRP0C864 163 aa10.39□□□□□ -0.75
SSBP3-214ENST00000533209 GAAP10253 952 aa10.39□□□□□ -0.75
SSBP3-214ENST00000533209 ZNF35P13682 527 aa10.39□□□□□ -0.75
SSBP3-214ENST00000533209 ZNF32P17041 273 aa10.39□□□□□ -0.75
SSBP3-214ENST00000533209 CRISP1P54107 249 aa10.39□□□□□ -0.75
SSBP3-214ENST00000533209 ESRRGP62508 458 aa10.39□□□□□ -0.75
SSBP3-214ENST00000533209 PPP2R2BQ00005 443 aa10.39□□□□□ -0.75
SSBP3-214ENST00000533209 PSG4Q00888 419 aa10.39□□□□□ -0.75
SSBP3-214ENST00000533209 HGFACQ04756 655 aa10.39□□□□□ -0.75
SSBP3-214ENST00000533209 PABPC1L2AQ5JQF8 200 aa10.39□□□□□ -0.75
SSBP3-214ENST00000533209 DNM1P34Q6PK57 102 aa10.39□□□□□ -0.75
SSBP3-214ENST00000533209 C20orf204Q6ZNR8 217 aa10.39□□□□□ -0.75
SSBP3-214ENST00000533209 IL17RDQ8NFM7 739 aa10.39□□□□□ -0.75
SSBP3-214ENST00000533209 ZNRF4Q8WWF5 429 aa10.39□□□□□ -0.75
SSBP3-214ENST00000533209 IGFBPL1Q8WX77 278 aa10.39□□□□□ -0.75
SSBP3-214ENST00000533209 C11orf40Q8WZ69 217 aa10.39□□□□□ -0.75
SSBP3-214ENST00000533209 NINJ1Q92982 152 aa10.39□□□□□ -0.75
SSBP3-214ENST00000533209 FBXW5Q969U6 566 aa10.39□□□□□ -0.75
SSBP3-214ENST00000533209 KCNS3Q9BQ31 491 aa10.39□□□□□ -0.75
SSBP3-214ENST00000533209 OR2H1Q9GZK4 316 aa10.39□□□□□ -0.75
SSBP3-214ENST00000533209 SLC25A19Q9HC21 320 aa10.39□□□□□ -0.75
SSBP3-214ENST00000533209 CCNB1IP1Q9NPC3 277 aa10.39□□□□□ -0.75
SSBP3-214ENST00000533209 KRT84Q9NSB2 600 aa10.39□□□□□ -0.75
SSBP3-214ENST00000533209 CISD1Q9NZ45 108 aaKnown RBP10.39□□□□□ -0.75
SSBP3-214ENST00000533209 POU2F3Q9UKI9 436 aa10.39□□□□□ -0.75
SSBP3-214ENST00000533209 ATP23Q9Y6H3 246 aa10.39□□□□□ -0.75
SSBP3-214ENST00000533209 CSMD1Q96PZ7 3565 aa10.38□□□□□ -0.75
SSBP3-214ENST00000533209 PLCE1Q9P212 2302 aa10.38□□□□□ -0.75
SSBP3-214ENST00000533209 C12orf71A8MTZ7 269 aa10.38□□□□□ -0.75
SSBP3-214ENST00000533209 FAM171A2A8MVW0 826 aa10.38□□□□□ -0.75
SSBP3-214ENST00000533209 IFNGP01579 166 aa10.38□□□□□ -0.75
SSBP3-214ENST00000533209 TFP02787 698 aa10.38□□□□□ -0.75
SSBP3-214ENST00000533209 SOD3P08294 240 aa10.38□□□□□ -0.75
SSBP3-214ENST00000533209 DNASE1P24855 282 aa10.38□□□□□ -0.75
SSBP3-214ENST00000533209 EPHA2P29317 976 aa10.38□□□□□ -0.75
SSBP3-214ENST00000533209 PYCR1P32322 319 aa10.38□□□□□ -0.75
SSBP3-214ENST00000533209 CENPAP49450 140 aa10.38□□□□□ -0.75
SSBP3-214ENST00000533209 PCBD1P61457 104 aa10.38□□□□□ -0.75
SSBP3-214ENST00000533209 LSM6P62312 80 aaKnown RBP10.38□□□□□ -0.75
SSBP3-214ENST00000533209 HSF2Q03933 536 aa10.38□□□□□ -0.75
SSBP3-214ENST00000533209 KEAP1Q14145 624 aa10.38□□□□□ -0.75
SSBP3-214ENST00000533209 MEP1BQ16820 701 aa10.38□□□□□ -0.75
SSBP3-214ENST00000533209 TMEM236Q5W0B7 351 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms