RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-223	ENST00000532370	RAB35	Q15286	201 aa		15.03	■□□□□ -0
CTSB-223	ENST00000532370	ZNF620	Q6ZNG0	422 aa		15.03	■□□□□ -0
CTSB-223	ENST00000532370	DPPA2	Q7Z7J5	298 aa		15.03	■□□□□ -0
CTSB-223	ENST00000532370	AQP12A	Q8IXF9	295 aa		15.03	■□□□□ -0
CTSB-223	ENST00000532370	SVOPL	Q8N434	492 aa		15.03	■□□□□ -0
CTSB-223	ENST00000532370	AKR7L	Q8NHP1	331 aa		15.03	■□□□□ -0
CTSB-223	ENST00000532370	C18orf12	Q96KH6	178 aa		15.03	■□□□□ -0
CTSB-223	ENST00000532370	TSSK2	Q96PF2	358 aa		15.03	■□□□□ -0
CTSB-223	ENST00000532370	IFT27	Q9BW83	186 aa		15.03	■□□□□ -0
CTSB-223	ENST00000532370	EGLN3	Q9H6Z9	239 aa		15.03	■□□□□ -0
CTSB-223	ENST00000532370	ZNF442	Q9H7R0	627 aa		15.03	■□□□□ -0
CTSB-223	ENST00000532370	CCNB1IP1	Q9NPC3	277 aa		15.03	■□□□□ -0
CTSB-223	ENST00000532370	VSX1	Q9NZR4	365 aa	Predicted RBP	15.03	■□□□□ -0
CTSB-223	ENST00000532370	FBXL3	Q9UKT7	428 aa		15.03	■□□□□ -0
CTSB-223	ENST00000532370	FZR1	Q9UM11	496 aa		15.03	■□□□□ -0
CTSB-223	ENST00000532370	POMP	Q9Y244	141 aa		15.03	■□□□□ -0
CTSB-223	ENST00000532370	SAMHD1	Q9Y3Z3	626 aa	Known RBP	15.03	■□□□□ -0
CTSB-223	ENST00000532370	TMEM129	A0AVI4	362 aa		15.02	■□□□□ -0
CTSB-223	ENST00000532370	DHRS12	A0PJE2	317 aa		15.02	■□□□□ -0
CTSB-223	ENST00000532370		B9A039	149 aa		15.02	■□□□□ -0
CTSB-223	ENST00000532370	AHCYL1	O43865	530 aa		15.02	■□□□□ -0
CTSB-223	ENST00000532370	MPZL1	O95297	269 aa		15.02	■□□□□ -0
CTSB-223	ENST00000532370	IGFBP1	P08833	259 aa	Predicted RBP	15.02	■□□□□ -0
CTSB-223	ENST00000532370	INHBB	P09529	407 aa		15.02	■□□□□ -0
CTSB-223	ENST00000532370	FOSL1	P15407	271 aa		15.02	■□□□□ -0
CTSB-223	ENST00000532370	SLC6A6	P31641	620 aa		15.02	■□□□□ -0
CTSB-223	ENST00000532370	PSG4	Q00888	419 aa		15.02	■□□□□ -0
CTSB-223	ENST00000532370	HSF2	Q03933	536 aa		15.02	■□□□□ -0
CTSB-223	ENST00000532370	ENDOG	Q14249	297 aa	Known RBP	15.02	■□□□□ -0
CTSB-223	ENST00000532370	FLOT2	Q14254	428 aa		15.02	■□□□□ -0
CTSB-223	ENST00000532370	EFNB3	Q15768	340 aa		15.02	■□□□□ -0
CTSB-223	ENST00000532370	CLEC12A	Q5QGZ9	265 aa		15.02	■□□□□ -0
CTSB-223	ENST00000532370	SPATA24	Q86W54	205 aa		15.02	■□□□□ -0
CTSB-223	ENST00000532370	AQP11	Q8NBQ7	271 aa		15.02	■□□□□ -0
CTSB-223	ENST00000532370	COX4I2	Q96KJ9	171 aa		15.02	■□□□□ -0
CTSB-223	ENST00000532370	ZNF416	Q9BWM5	594 aa		15.02	■□□□□ -0
CTSB-223	ENST00000532370	NUAK2	Q9H093	628 aa		15.02	■□□□□ -0
CTSB-223	ENST00000532370	WNT5B	Q9H1J7	359 aa		15.02	■□□□□ -0
CTSB-223	ENST00000532370	KCNN2	Q9H2S1	579 aa		15.02	■□□□□ -0
CTSB-223	ENST00000532370	OR51B6	Q9H340	312 aa		15.02	■□□□□ -0
CTSB-223	ENST00000532370	PLK3	Q9H4B4	646 aa		15.02	■□□□□ -0
CTSB-223	ENST00000532370	REEP1	Q9H902	201 aa		15.02	■□□□□ -0
CTSB-223	ENST00000532370	POLE4	Q9NR33	117 aa		15.02	■□□□□ -0
CTSB-223	ENST00000532370	COA3	Q9Y2R0	106 aa	Predicted RBP	15.02	■□□□□ -0
CTSB-223	ENST00000532370	PMF1-BGLAP	U3KQ54	211 aa		15.02	■□□□□ -0
CTSB-223	ENST00000532370	HEATR1	Q9H583	2144 aa	Known RBP	15.02	□□□□□ -0.01
CTSB-223	ENST00000532370	DCTN6	O00399	190 aa		15.01	□□□□□ -0.01
CTSB-223	ENST00000532370	GPANK1	O95872	356 aa		15.01	□□□□□ -0.01
CTSB-223	ENST00000532370	CST2	P09228	141 aa		15.01	□□□□□ -0.01
CTSB-223	ENST00000532370	FAM157B	P0CG42	384 aa		15.01	□□□□□ -0.01
CTSB-223	ENST00000532370	BMP4	P12644	408 aa		15.01	□□□□□ -0.01
CTSB-223	ENST00000532370	APEH	P13798	732 aa	Known RBP	15.01	□□□□□ -0.01
CTSB-223	ENST00000532370	HIST1H1C	P16403	213 aa	Known RBP	15.01	□□□□□ -0.01
CTSB-223	ENST00000532370	MSR1	P21757	451 aa		15.01	□□□□□ -0.01
CTSB-223	ENST00000532370	GUCA1A	P43080	201 aa	Predicted RBP	15.01	□□□□□ -0.01
CTSB-223	ENST00000532370	SNRPD2	P62316	118 aa	Known RBP	15.01	□□□□□ -0.01
CTSB-223	ENST00000532370	GALK2	Q01415	458 aa		15.01	□□□□□ -0.01
CTSB-223	ENST00000532370	PLP2	Q04941	152 aa		15.01	□□□□□ -0.01
CTSB-223	ENST00000532370	MICA	Q29983	383 aa		15.01	□□□□□ -0.01
CTSB-223	ENST00000532370	SLC35F1	Q5T1Q4	408 aa		15.01	□□□□□ -0.01
CTSB-223	ENST00000532370	DNM1P46	Q6ZS02	220 aa		15.01	□□□□□ -0.01
CTSB-223	ENST00000532370	ADCK1	Q86TW2	530 aa		15.01	□□□□□ -0.01
CTSB-223	ENST00000532370	LRP11	Q86VZ4	500 aa		15.01	□□□□□ -0.01
CTSB-223	ENST00000532370	ZCCHC24	Q8N2G6	241 aa	Known RBP	15.01	□□□□□ -0.01
CTSB-223	ENST00000532370	OR4K13	Q8NH42	304 aa		15.01	□□□□□ -0.01
CTSB-223	ENST00000532370	POP5	Q969H6	163 aa	Known RBP	15.01	□□□□□ -0.01
CTSB-223	ENST00000532370	NMNAT3	Q96T66	252 aa		15.01	□□□□□ -0.01
CTSB-223	ENST00000532370	DOK1	Q99704	481 aa		15.01	□□□□□ -0.01
CTSB-223	ENST00000532370	BDH2	Q9BUT1	245 aa		15.01	□□□□□ -0.01
CTSB-223	ENST00000532370	MRPL37	Q9BZE1	423 aa	Known RBP	15.01	□□□□□ -0.01
CTSB-223	ENST00000532370	PLA2G12A	Q9BZM1	189 aa		15.01	□□□□□ -0.01
CTSB-223	ENST00000532370	OR2H1	Q9GZK4	316 aa		15.01	□□□□□ -0.01
CTSB-223	ENST00000532370	BARX1	Q9HBU1	254 aa	Predicted RBP	15.01	□□□□□ -0.01
CTSB-223	ENST00000532370	SLC7A8	Q9UHI5	535 aa		15.01	□□□□□ -0.01
CTSB-223	ENST00000532370	CMAHP	Q9Y471	501 aa		15.01	□□□□□ -0.01
CTSB-223	ENST00000532370	SPEF1	Q9Y4P9	236 aa		15.01	□□□□□ -0.01
CTSB-223	ENST00000532370	ZAN	Q9Y493	2812 aa		15.01	□□□□□ -0.01
CTSB-223	ENST00000532370	LOC100509620	A0A075B734	347 aa		15	□□□□□ -0.01
CTSB-223	ENST00000532370	IQCM	A0A1B0GVH7	501 aa		15	□□□□□ -0.01
CTSB-223	ENST00000532370	ARPC3	O15145	178 aa		15	□□□□□ -0.01
CTSB-223	ENST00000532370	KHDRBS3	O75525	346 aa	Known RBP	15	□□□□□ -0.01
CTSB-223	ENST00000532370	CST1	P01037	141 aa		15	□□□□□ -0.01
CTSB-223	ENST00000532370	CCNO	P22674	350 aa		15	□□□□□ -0.01
CTSB-223	ENST00000532370	GLRX	P35754	106 aa		15	□□□□□ -0.01
CTSB-223	ENST00000532370	NUDT6	P53370	316 aa		15	□□□□□ -0.01
CTSB-223	ENST00000532370	ZNF774	Q6NX45	483 aa		15	□□□□□ -0.01
CTSB-223	ENST00000532370	LEG1	Q6P5S2	330 aa		15	□□□□□ -0.01
CTSB-223	ENST00000532370	TMEM179B	Q7Z7N9	219 aa		15	□□□□□ -0.01
CTSB-223	ENST00000532370	LINC00471	Q8N535	108 aa		15	□□□□□ -0.01
CTSB-223	ENST00000532370	MAPK1IP1L	Q8NDC0	245 aa		15	□□□□□ -0.01
CTSB-223	ENST00000532370	OR8D4	Q8NGM9	314 aa		15	□□□□□ -0.01
CTSB-223	ENST00000532370	SORCS2	Q96PQ0	1159 aa		15	□□□□□ -0.01
CTSB-223	ENST00000532370	VRK1	Q99986	396 aa	Predicted RBP	15	□□□□□ -0.01
CTSB-223	ENST00000532370	SYT3	Q9BQG1	590 aa		15	□□□□□ -0.01
CTSB-223	ENST00000532370	CDH20	Q9HBT6	801 aa		15	□□□□□ -0.01
CTSB-223	ENST00000532370	TIMM10B	Q9Y5J6	103 aa		15	□□□□□ -0.01
CTSB-223	ENST00000532370	CDH10	Q9Y6N8	788 aa		15	□□□□□ -0.01
CTSB-223	ENST00000532370	TCRBV3S1	A0A5B6	114 aa		14.99	□□□□□ -0.01
CTSB-223	ENST00000532370	VSTM5	A8MXK1	200 aa		14.99	□□□□□ -0.01
CTSB-223	ENST00000532370	RNF223	E7ERA6	249 aa		14.99	□□□□□ -0.01

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