RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 PABPC1L2AQ5JQF8 200 aa19.8■□□□□ 0.76
CAPN1-222ENST00000532285 FAM168AQ92567 244 aa19.8■□□□□ 0.76
CAPN1-222ENST00000532285 RASD2Q96D21 266 aa19.8■□□□□ 0.76
CAPN1-222ENST00000532285 MAGIXQ9H6Y5 334 aa19.8■□□□□ 0.76
CAPN1-222ENST00000532285 IL20RAQ9UHF4 553 aa19.8■□□□□ 0.76
CAPN1-222ENST00000532285 IER3IP1Q9Y5U9 82 aa19.8■□□□□ 0.76
CAPN1-222ENST00000532285 TLN2Q9Y4G6 2542 aa19.79■□□□□ 0.76
CAPN1-222ENST00000532285 IGHV4-30-2A0A087WSY4 118 aa19.79■□□□□ 0.76
CAPN1-222ENST00000532285 ERCC1P07992 297 aaPredicted RBP19.79■□□□□ 0.76
CAPN1-222ENST00000532285 CCL2P13500 99 aa19.79■□□□□ 0.76
CAPN1-222ENST00000532285 ZNF32P17041 273 aa19.79■□□□□ 0.76
CAPN1-222ENST00000532285 MSR1P21757 451 aa19.79■□□□□ 0.76
CAPN1-222ENST00000532285 APEX1P27695 318 aaKnown RBP19.79■□□□□ 0.76
CAPN1-222ENST00000532285 LAP3P28838 519 aa19.79■□□□□ 0.76
CAPN1-222ENST00000532285 APLNRP35414 380 aa19.79■□□□□ 0.76
CAPN1-222ENST00000532285 MAGEA2P43356 314 aa19.79■□□□□ 0.76
CAPN1-222ENST00000532285 HMGA2P52926 109 aa19.79■□□□□ 0.76
CAPN1-222ENST00000532285 MS4A2Q01362 244 aa19.79■□□□□ 0.76
CAPN1-222ENST00000532285 PAQR4Q8N4S7 273 aaPredicted RBP19.79■□□□□ 0.76
CAPN1-222ENST00000532285 MAPK1IP1LQ8NDC0 245 aa19.79■□□□□ 0.76
CAPN1-222ENST00000532285 CPEB3Q8NE35 698 aaKnown RBP19.79■□□□□ 0.76
CAPN1-222ENST00000532285 ASB9Q96DX5 294 aa19.79■□□□□ 0.76
CAPN1-222ENST00000532285 MRPL37Q9BZE1 423 aaKnown RBP19.79■□□□□ 0.76
CAPN1-222ENST00000532285 YLPM1P49750 1951 aaKnown RBP19.79■□□□□ 0.76
CAPN1-222ENST00000532285 LY6HO94772 140 aa19.78■□□□□ 0.76
CAPN1-222ENST00000532285 TXNDC12O95881 172 aa19.78■□□□□ 0.76
CAPN1-222ENST00000532285 APEHP13798 732 aaKnown RBP19.78■□□□□ 0.76
CAPN1-222ENST00000532285 SLC25A16P16260 332 aa19.78■□□□□ 0.76
CAPN1-222ENST00000532285 STOMP27105 288 aa19.78■□□□□ 0.76
CAPN1-222ENST00000532285 PCSK6P29122 969 aa19.78■□□□□ 0.76
CAPN1-222ENST00000532285 MSMPQ1L6U9 139 aa19.78■□□□□ 0.76
CAPN1-222ENST00000532285 RFX4Q33E94 735 aa19.78■□□□□ 0.76
CAPN1-222ENST00000532285 C1orf94Q6P1W5 598 aa19.78■□□□□ 0.76
CAPN1-222ENST00000532285 ADCK1Q86TW2 530 aa19.78■□□□□ 0.76
CAPN1-222ENST00000532285 ALDH16A1Q8IZ83 802 aa19.78■□□□□ 0.76
CAPN1-222ENST00000532285 LINC00471Q8N535 108 aa19.78■□□□□ 0.76
CAPN1-222ENST00000532285 FANK1Q8TC84 345 aa19.78■□□□□ 0.76
CAPN1-222ENST00000532285 GNPDA2Q8TDQ7 276 aa19.78■□□□□ 0.76
CAPN1-222ENST00000532285 C10orf105Q8TEF2 133 aa19.78■□□□□ 0.76
CAPN1-222ENST00000532285 WACQ9BTA9 647 aa19.78■□□□□ 0.76
CAPN1-222ENST00000532285 DYNLRB1Q9NP97 96 aa19.78■□□□□ 0.76
CAPN1-222ENST00000532285 MYOZ1Q9NP98 299 aaPredicted RBP19.78■□□□□ 0.76
CAPN1-222ENST00000532285 POLE4Q9NR33 117 aa19.78■□□□□ 0.76
CAPN1-222ENST00000532285 TIMM10BQ9Y5J6 103 aa19.78■□□□□ 0.76
CAPN1-222ENST00000532285 LYVE1Q9Y5Y7 322 aa19.78■□□□□ 0.76
CAPN1-222ENST00000532285 CSPG4Q6UVK1 2322 aa19.77■□□□□ 0.76
CAPN1-222ENST00000532285 SOCS2O14508 198 aa19.77■□□□□ 0.76
CAPN1-222ENST00000532285 SYNGR3O43761 229 aa19.77■□□□□ 0.76
CAPN1-222ENST00000532285 STAMBPO95630 424 aa19.77■□□□□ 0.76
CAPN1-222ENST00000532285 SLC6A6P31641 620 aa19.77■□□□□ 0.76
CAPN1-222ENST00000532285 RAD52P43351 418 aa19.77■□□□□ 0.76
CAPN1-222ENST00000532285 GSSP48637 474 aa19.77■□□□□ 0.76
CAPN1-222ENST00000532285 PDLIM4P50479 330 aa19.77■□□□□ 0.76
CAPN1-222ENST00000532285 PSG4Q00888 419 aa19.77■□□□□ 0.76
CAPN1-222ENST00000532285 FAM98BQ52LJ0 330 aaKnown RBP19.77■□□□□ 0.76
CAPN1-222ENST00000532285 SYT9Q86SS6 491 aa19.77■□□□□ 0.76
CAPN1-222ENST00000532285 NEU4Q8WWR8 484 aaPredicted RBP19.77■□□□□ 0.76
CAPN1-222ENST00000532285 LRGUKQ96M69 825 aa19.77■□□□□ 0.76
CAPN1-222ENST00000532285 THTPAQ9BU02 230 aa19.77■□□□□ 0.76
CAPN1-222ENST00000532285 TRIM15Q9C019 465 aa19.77■□□□□ 0.76
CAPN1-222ENST00000532285 OR2H1Q9GZK4 316 aa19.77■□□□□ 0.76
CAPN1-222ENST00000532285 OR52D1Q9H346 318 aa19.77■□□□□ 0.76
CAPN1-222ENST00000532285 VSX1Q9NZR4 365 aaPredicted RBP19.77■□□□□ 0.76
CAPN1-222ENST00000532285 C12orf71A8MTZ7 269 aa19.76■□□□□ 0.75
CAPN1-222ENST00000532285 TNFRSF11BO00300 401 aa19.76■□□□□ 0.75
CAPN1-222ENST00000532285 IMPA2O14732 288 aa19.76■□□□□ 0.75
CAPN1-222ENST00000532285 ADRA2AP08913 450 aa19.76■□□□□ 0.75
CAPN1-222ENST00000532285 FAM157BP0CG42 384 aa19.76■□□□□ 0.75
CAPN1-222ENST00000532285 CTLA4P16410 223 aa19.76■□□□□ 0.75
CAPN1-222ENST00000532285 UCP2P55851 309 aa19.76■□□□□ 0.75
CAPN1-222ENST00000532285 TSPAN31Q12999 210 aa19.76■□□□□ 0.75
CAPN1-222ENST00000532285 ENDOGQ14249 297 aaKnown RBP19.76■□□□□ 0.75
CAPN1-222ENST00000532285 RGS7BPQ6MZT1 257 aaPredicted RBP19.76■□□□□ 0.75
CAPN1-222ENST00000532285 AKR7LQ8NHP1 331 aa19.76■□□□□ 0.75
CAPN1-222ENST00000532285 CCDC124Q96CT7 223 aaKnown RBP19.76■□□□□ 0.75
CAPN1-222ENST00000532285 CLPTM1LQ96KA5 538 aa19.76■□□□□ 0.75
CAPN1-222ENST00000532285 ERMAPQ96PL5 475 aaPredicted RBP19.76■□□□□ 0.75
CAPN1-222ENST00000532285 SYT3Q9BQG1 590 aa19.76■□□□□ 0.75
CAPN1-222ENST00000532285 ZNF416Q9BWM5 594 aa19.76■□□□□ 0.75
CAPN1-222ENST00000532285 BCL2L14Q9BZR8 327 aa19.76■□□□□ 0.75
CAPN1-222ENST00000532285 SYT4Q9H2B2 425 aa19.76■□□□□ 0.75
CAPN1-222ENST00000532285 M0R233 179 aa19.75■□□□□ 0.75
CAPN1-222ENST00000532285 NDUFS8O00217 210 aa19.75■□□□□ 0.75
CAPN1-222ENST00000532285 ARPC3O15145 178 aa19.75■□□□□ 0.75
CAPN1-222ENST00000532285 SLC16A7O60669 478 aa19.75■□□□□ 0.75
CAPN1-222ENST00000532285 KHDRBS3O75525 346 aaKnown RBP19.75■□□□□ 0.75
CAPN1-222ENST00000532285 UBOX5O94941 541 aa19.75■□□□□ 0.75
CAPN1-222ENST00000532285 PPP1R3DO95685 299 aa19.75■□□□□ 0.75
CAPN1-222ENST00000532285 SCG5P05408 212 aa19.75■□□□□ 0.75
CAPN1-222ENST00000532285 GDI2P50395 445 aaKnown RBP19.75■□□□□ 0.75
CAPN1-222ENST00000532285 SELENOVP59797 346 aa19.75■□□□□ 0.75
CAPN1-222ENST00000532285 TRAP1Q12931 704 aaKnown RBP19.75■□□□□ 0.75
CAPN1-222ENST00000532285 PGBD2Q6P3X8 592 aa19.75■□□□□ 0.75
CAPN1-222ENST00000532285 PTCHD4Q6ZW05 846 aa19.75■□□□□ 0.75
CAPN1-222ENST00000532285 LRP11Q86VZ4 500 aa19.75■□□□□ 0.75
CAPN1-222ENST00000532285 ZCCHC24Q8N2G6 241 aaKnown RBP19.75■□□□□ 0.75
CAPN1-222ENST00000532285 POM121L2Q96KW2 1035 aa19.75■□□□□ 0.75
CAPN1-222ENST00000532285 WNT5BQ9H1J7 359 aa19.75■□□□□ 0.75
CAPN1-222ENST00000532285 MS4A5Q9H3V2 200 aa19.75■□□□□ 0.75
CAPN1-222ENST00000532285 REV1Q9UBZ9 1251 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms