RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 RBM45Q8IUH3 476 aaKnown RBP5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 GABRG1Q8N1C3 465 aa5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 UBE2J2Q8N2K1 259 aa5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 TMEM99Q8N816 258 aa5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 CCDC197Q8NCU1 140 aa5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 STEAP2Q8NFT2 490 aa5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 OR9K2Q8NGE7 335 aa5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 OR4D11Q8NGI4 311 aa5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 ST7LQ8TDW4 575 aa5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 ADAMTS16Q8TE57 1224 aa5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 TAAR8Q969N4 342 aa5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 APH1AQ96BI3 265 aa5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 ZC3HAV1LQ96H79 300 aaKnown RBP5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 LURAP1Q96LR2 239 aa5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 HS6ST2Q96MM7 605 aa5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 EPYCQ99645 322 aa5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 KCTD14Q9BQ13 255 aaPredicted RBP5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 SF3B5Q9BWJ5 86 aaKnown RBP5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 CACNG6Q9BXT2 260 aa5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 HDHD5Q9BXW7 423 aa5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 POLDIP3Q9BY77 421 aaKnown RBP5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 ACTR6Q9GZN1 396 aa5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 OR10A2Q9H208 303 aa5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 MMP27Q9H306 513 aa5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 ARL8BQ9NVJ2 186 aa5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 PARPBPQ9NWS1 579 aa5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 NDE1Q9NXR1 346 aa5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 FAM53CQ9NYF3 392 aa5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 ZNF226Q9NYT6 803 aa5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 ABCD2Q9UBJ2 740 aa5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 ADAM21Q9UKJ8 722 aa5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 SLC7A7Q9UM01 511 aa5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 RASD1Q9Y272 281 aa5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 CMAHPQ9Y471 501 aa5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 TESMINQ9Y4I5 508 aa5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 FREM3P0C091 2139 aa5.09□□□□□ -1.59
HMGB1P42-201ENST00000532126 UNC79Q9P2D8 2635 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 NPIPB13A6NJU9 1138 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 NPIPB5A8MRT5 1133 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 NPIPB4C9JG80 1138 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 FTCDNL1E5RQL4 147 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 KPNA4O00629 521 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 SHOX2O60902 331 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 PRSS23O95084 383 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 SERPINA1P01009 418 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 NQO1P15559 274 aaKnown RBP5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 NCK1P16333 377 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 PSMB1P20618 241 aaKnown RBP5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 ACHEP22303 614 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 CBLP22681 906 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 EDNRAP25101 427 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 GRPRP30550 384 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 CDAP32320 146 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 IFNA8P32881 189 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 OR1E2P47887 323 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 P2RY4P51582 365 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 KRTAP10-9P60411 292 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 SLC25A3Q00325 362 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 ITGADQ13349 1161 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 PMS2P3Q13401 168 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 C1DQ13901 141 aaKnown RBP5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 MFSD13AQ14CX5 517 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 TSC22D1Q15714 1073 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 SAMD4BQ5PRF9 694 aaKnown RBP5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 SHEQ5VZ18 495 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 FBXW9Q5XUX1 488 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 TTC33Q6PID6 262 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 C16orf89Q6UX73 402 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 PTCHD4Q6ZW05 846 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 BHLHA15Q7RTS1 189 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 AAED1Q7RTV5 226 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 PGAM4Q8N0Y7 254 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 RNF148Q8N7C7 305 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 ADPRHL1Q8NDY3 354 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 BEND2Q8NDZ0 799 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 OR6S1Q8NH40 331 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 GLMPQ8WWB7 406 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 THRSPQ92748 146 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 TFAP2CQ92754 450 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 TMEM45BQ96B21 275 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 S100PBPQ96BU1 408 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 ELMOD3Q96FG2 381 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 TRMT61AQ96FX7 289 aaKnown RBP5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 SLC41A3Q96GZ6 507 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 TMEM43Q9BTV4 400 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 SLC19A3Q9BZV2 496 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 POLR2J2Q9GZM3 115 aaKnown RBP5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 POLR2J3Q9H1A7 115 aaKnown RBP5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 ASB6Q9NWX5 421 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 HAO2Q9NYQ3 351 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 CRNNQ9UBG3 495 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 UPB1Q9UBR1 384 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 RIMS3Q9UJD0 308 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 B3GALT5Q9Y2C3 310 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 FLVCR1Q9Y5Y0 555 aa5.08□□□□□ -1.6
HMGB1P42-201ENST00000532126 PCNX3Q9H6A9 2034 aa5.07□□□□□ -1.6
HMGB1P42-201ENST00000532126 NBPF19A0A087WUL8 3843 aa5.07□□□□□ -1.6
HMGB1P42-201ENST00000532126 PCNX1Q96RV3 2341 aa5.07□□□□□ -1.6
HMGB1P42-201ENST00000532126 A0A0B4J203 849 aa5.07□□□□□ -1.6
HMGB1P42-201ENST00000532126 TRBV2A0A0J9YWF9 115 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms