RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 CRISP2P16562 243 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 ZNF17P17021 662 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 ZNF30P17039 623 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 RCC1P18754 421 aaPredicted RBP2.03□□□□□ -2.08
CD44-234ENST00000531873 ELK1P19419 428 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 SRMP19623 302 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 EIF2S2P20042 333 aaKnown RBP2.03□□□□□ -2.08
CD44-234ENST00000531873 CD82P27701 267 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 CRISP3P54108 245 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 SH3BGRP55822 239 aaPredicted RBP2.03□□□□□ -2.08
CD44-234ENST00000531873 TIMM10P62072 90 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 RPS15AP62244 130 aaKnown RBP2.03□□□□□ -2.08
CD44-234ENST00000531873 PSG7Q13046 419 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 UNC119Q13432 240 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 GGTLC2Q14390 218 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 TRAM2Q15035 370 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 PON3Q15166 354 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 CT45A1Q5HYN5 189 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 FHL5Q5TD97 284 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 FRMPD2BQ6IN97 320 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 TTC23LQ6PF05 361 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 SPESP1Q6UW49 350 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 ZNF621Q6ZSS3 439 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 CMC1Q7Z7K0 106 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 APRG1Q8IVJ8 170 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 STPG2Q8N412 459 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 JAGN1Q8N5M9 183 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 DCAF4L2Q8NA75 395 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 PROKR2Q8NFJ6 384 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 OR2L5Q8NG80 312 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 CT45A3Q8NHU0 189 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 TOP1MTQ969P6 601 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 KIAA1143Q96AT1 154 aaPredicted RBP2.03□□□□□ -2.08
CD44-234ENST00000531873 AURKBQ96GD4 344 aaPredicted RBP2.03□□□□□ -2.08
CD44-234ENST00000531873 SLC35E1Q96K37 410 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 P2RX4Q99571 388 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 SH3GL3Q99963 347 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 ECSITQ9BQ95 431 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 MRPL37Q9BZE1 423 aaKnown RBP2.03□□□□□ -2.08
CD44-234ENST00000531873 RGCCQ9H4X1 137 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 CLMPQ9H6B4 373 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 ACP6Q9NPH0 428 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 PXMP2Q9NR77 195 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 CTPS2Q9NRF8 586 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 AGPAT4Q9NRZ5 378 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 RCL1Q9Y2P8 373 aaKnown RBP2.03□□□□□ -2.08
CD44-234ENST00000531873 GOLT1BQ9Y3E0 138 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 DOCK8Q8NF50 2099 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 PCM1Q15154 2024 aa2.03□□□□□ -2.08
CD44-234ENST00000531873 CAMTA1Q9Y6Y1 1673 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 MEGF6O75095 1541 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 ARHGAP23Q9P227 1491 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 UBN2Q6ZU65 1347 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 MROH5Q6ZUA9 1318 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 NCBP2LA6PVI3 153 aaKnown RBP2.02□□□□□ -2.09
CD44-234ENST00000531873 SMKR1H3BMG3 65 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 M0R3G1 203 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 TRDMT1O14717 391 aaKnown RBP2.02□□□□□ -2.09
CD44-234ENST00000531873 SLC9A3R1O14745 358 aaPredicted RBP2.02□□□□□ -2.09
CD44-234ENST00000531873 BCKDKO14874 412 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 HAT1O14929 419 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 NUPL2O15504 423 aaKnown RBP2.02□□□□□ -2.09
CD44-234ENST00000531873 SRP72O76094 671 aaKnown RBP2.02□□□□□ -2.09
CD44-234ENST00000531873 AQP8O94778 261 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 ACTL6AO96019 429 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 IGLV2-23P01705 113 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 IGHV4-34P06331 123 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 CRYGCP07315 174 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 CD1EP15812 388 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 CNR1P21554 472 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 CCNE1P24864 410 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 NUDT1P36639 197 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 RND2P52198 227 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 CLDN18P56856 261 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 CARD18P57730 90 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 STXBP1P61764 594 aaKnown RBP2.02□□□□□ -2.09
CD44-234ENST00000531873 RAD51Q06609 339 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 OR7A5Q15622 319 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 RPEL1Q2QD12 228 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 RFX4Q33E94 735 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 NKAIN1Q4KMZ8 207 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 BEX5Q5H9J7 111 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 STUMQ69YW2 141 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 LYPD2Q6UXB3 125 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 ANGPTL8Q6UXH0 198 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 HDDC2Q7Z4H3 204 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 LINC00523Q86TU6 105 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 OR2A1Q8NGT9 310 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 GEMIN6Q8WXD5 167 aaKnown RBP2.02□□□□□ -2.09
CD44-234ENST00000531873 DNAJC19Q96DA6 116 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 ECHDC3Q96DC8 303 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 ASB9Q96DX5 294 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 CERS2Q96G23 380 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 WFIKKN1Q96NZ8 548 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 SERPINB12Q96P63 405 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 OPALINQ96PE5 141 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 FBXO44Q9H4M3 255 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 TMEM38AQ9H6F2 299 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 KCNJ16Q9NPI9 418 aa2.02□□□□□ -2.09
CD44-234ENST00000531873 PRSS16Q9NQE7 514 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms