RNA–Protein interactions for RNA: ENST00000531502.5

CTSB-221, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-221ENST00000531502 KLF17Q5JT82 389 aaPredicted RBP12.16□□□□□ -0.46
CTSB-221ENST00000531502 ARMC4Q5T2S8 1044 aa12.16□□□□□ -0.46
CTSB-221ENST00000531502 RFPL4BQ6ZWI9 263 aa12.16□□□□□ -0.46
CTSB-221ENST00000531502 HIST3H2AQ7L7L0 130 aa12.16□□□□□ -0.46
CTSB-221ENST00000531502 NANOGNBQ7Z5D8 188 aa12.16□□□□□ -0.46
CTSB-221ENST00000531502 VANGL1Q8TAA9 524 aaPredicted RBP12.16□□□□□ -0.46
CTSB-221ENST00000531502 HIST1H2ACQ93077 130 aa12.16□□□□□ -0.46
CTSB-221ENST00000531502 POP5Q969H6 163 aaKnown RBP12.16□□□□□ -0.46
CTSB-221ENST00000531502 ZNF48Q96MX3 618 aaPredicted RBP12.16□□□□□ -0.46
CTSB-221ENST00000531502 C7orf26Q96N11 449 aa12.16□□□□□ -0.46
CTSB-221ENST00000531502 ZNF69Q9UC07 566 aa12.16□□□□□ -0.46
CTSB-221ENST00000531502 A0A1W2PRG6 482 aa12.15□□□□□ -0.46
CTSB-221ENST00000531502 ISPDA4D126 451 aa12.15□□□□□ -0.46
CTSB-221ENST00000531502 C5orf49A4QMS7 147 aa12.15□□□□□ -0.46
CTSB-221ENST00000531502 DNAJC9-AS1A6NH13 148 aa12.15□□□□□ -0.46
CTSB-221ENST00000531502 TRAPPC2LH3BP13 241 aa12.15□□□□□ -0.46
CTSB-221ENST00000531502 FOXH1O75593 365 aa12.15□□□□□ -0.46
CTSB-221ENST00000531502 UMPSP11172 480 aa12.15□□□□□ -0.46
CTSB-221ENST00000531502 AQP2P41181 271 aa12.15□□□□□ -0.46
CTSB-221ENST00000531502 ATP4BP51164 291 aa12.15□□□□□ -0.46
CTSB-221ENST00000531502 PSG4Q00888 419 aa12.15□□□□□ -0.46
CTSB-221ENST00000531502 SLC3A1Q07837 685 aa12.15□□□□□ -0.46
CTSB-221ENST00000531502 BCL6BQ8N143 479 aaPredicted RBP12.15□□□□□ -0.46
CTSB-221ENST00000531502 AKR7LQ8NHP1 331 aa12.15□□□□□ -0.46
CTSB-221ENST00000531502 ST7LQ8TDW4 575 aa12.15□□□□□ -0.46
CTSB-221ENST00000531502 GEMIN6Q8WXD5 167 aaKnown RBP12.15□□□□□ -0.46
CTSB-221ENST00000531502 HDAC2Q92769 488 aaKnown RBP12.15□□□□□ -0.46
CTSB-221ENST00000531502 TAMM41Q96BW9 452 aa12.15□□□□□ -0.46
CTSB-221ENST00000531502 DUX5Q96PT3 197 aa12.15□□□□□ -0.46
CTSB-221ENST00000531502 EGLN1Q9GZT9 426 aa12.15□□□□□ -0.46
CTSB-221ENST00000531502 SMURF2Q9HAU4 748 aa12.15□□□□□ -0.46
CTSB-221ENST00000531502 NPHS2Q9NP85 383 aa12.15□□□□□ -0.46
CTSB-221ENST00000531502 CYSLTR2Q9NS75 346 aa12.15□□□□□ -0.46
CTSB-221ENST00000531502 UBAP1Q9NZ09 502 aa12.15□□□□□ -0.46
CTSB-221ENST00000531502 PURGQ9UJV8 347 aaKnown RBP12.15□□□□□ -0.46
CTSB-221ENST00000531502 NUP50Q9UKX7 468 aa12.15□□□□□ -0.46
CTSB-221ENST00000531502 NPTNQ9Y639 398 aa12.15□□□□□ -0.46
CTSB-221ENST00000531502 PLSCR5A0PG75 271 aa12.14□□□□□ -0.47
CTSB-221ENST00000531502 MCIDASD6RGH6 385 aa12.14□□□□□ -0.47
CTSB-221ENST00000531502 NGFP01138 241 aa12.14□□□□□ -0.47
CTSB-221ENST00000531502 MT-ND1P03886 318 aa12.14□□□□□ -0.47
CTSB-221ENST00000531502 ZNF12P17014 697 aa12.14□□□□□ -0.47
CTSB-221ENST00000531502 FUT1P19526 365 aa12.14□□□□□ -0.47
CTSB-221ENST00000531502 LIPAP38571 399 aa12.14□□□□□ -0.47
CTSB-221ENST00000531502 MTPNP58546 118 aa12.14□□□□□ -0.47
CTSB-221ENST00000531502 FMODQ06828 376 aa12.14□□□□□ -0.47
CTSB-221ENST00000531502 ZNF154Q13106 437 aa12.14□□□□□ -0.47
CTSB-221ENST00000531502 CYP51A1Q16850 503 aa12.14□□□□□ -0.47
CTSB-221ENST00000531502 PDLIM3Q53GG5 364 aaPredicted RBP12.14□□□□□ -0.47
CTSB-221ENST00000531502 FAM27BQ5VT28 67 aa12.14□□□□□ -0.47
CTSB-221ENST00000531502 SLC25A47Q6Q0C1 308 aa12.14□□□□□ -0.47
CTSB-221ENST00000531502 TREML1Q86YW5 311 aa12.14□□□□□ -0.47
CTSB-221ENST00000531502 NKAIN4Q8IVV8 208 aa12.14□□□□□ -0.47
CTSB-221ENST00000531502 DPP10Q8N608 796 aa12.14□□□□□ -0.47
CTSB-221ENST00000531502 MOSPD2Q8NHP6 518 aa12.14□□□□□ -0.47
CTSB-221ENST00000531502 PFN4Q8NHR9 129 aa12.14□□□□□ -0.47
CTSB-221ENST00000531502 LIPHQ8WWY8 451 aa12.14□□□□□ -0.47
CTSB-221ENST00000531502 CGREF1Q99674 301 aa12.14□□□□□ -0.47
CTSB-221ENST00000531502 WNT5BQ9H1J7 359 aa12.14□□□□□ -0.47
CTSB-221ENST00000531502 KCNN2Q9H2S1 579 aa12.14□□□□□ -0.47
CTSB-221ENST00000531502 KAT8Q9H7Z6 458 aaKnown RBP12.14□□□□□ -0.47
CTSB-221ENST00000531502 NANOGQ9H9S0 305 aa12.14□□□□□ -0.47
CTSB-221ENST00000531502 MSL2Q9HCI7 577 aa12.14□□□□□ -0.47
CTSB-221ENST00000531502 CCNB1IP1Q9NPC3 277 aa12.14□□□□□ -0.47
CTSB-221ENST00000531502 INIPQ9NRY2 104 aa12.14□□□□□ -0.47
CTSB-221ENST00000531502 C20orf141Q9NUB4 165 aa12.14□□□□□ -0.47
CTSB-221ENST00000531502 PLEK2Q9NYT0 353 aa12.14□□□□□ -0.47
CTSB-221ENST00000531502 EIF3KQ9UBQ5 218 aaKnown RBP12.14□□□□□ -0.47
CTSB-221ENST00000531502 CGGBP1Q9UFW8 167 aaPredicted RBP12.14□□□□□ -0.47
CTSB-221ENST00000531502 ZDHHC8Q9ULC8 765 aa12.14□□□□□ -0.47
CTSB-221ENST00000531502 CMYA5Q8N3K9 4069 aa12.13□□□□□ -0.47
CTSB-221ENST00000531502 NPIPB13A6NJU9 1138 aa12.13□□□□□ -0.47
CTSB-221ENST00000531502 NPIPB4C9JG80 1138 aa12.13□□□□□ -0.47
CTSB-221ENST00000531502 H3BSA7 217 aa12.13□□□□□ -0.47
CTSB-221ENST00000531502 OR7A10O76100 309 aa12.13□□□□□ -0.47
CTSB-221ENST00000531502 IGF2P01344 180 aa12.13□□□□□ -0.47
CTSB-221ENST00000531502 IGHMP01871 453 aa12.13□□□□□ -0.47
CTSB-221ENST00000531502 PCGF2P35227 344 aa12.13□□□□□ -0.47
CTSB-221ENST00000531502 SLC6A9P48067 706 aa12.13□□□□□ -0.47
CTSB-221ENST00000531502 GDI2P50395 445 aaKnown RBP12.13□□□□□ -0.47
CTSB-221ENST00000531502 GZMMP51124 257 aa12.13□□□□□ -0.47
CTSB-221ENST00000531502 DAP3P51398 398 aaKnown RBP12.13□□□□□ -0.47
CTSB-221ENST00000531502 SEC61A1P61619 476 aaKnown RBP12.13□□□□□ -0.47
CTSB-221ENST00000531502 PPP1CBP62140 327 aa12.13□□□□□ -0.47
CTSB-221ENST00000531502 ERVK-25P63136 954 aa12.13□□□□□ -0.47
CTSB-221ENST00000531502 CDK5R2Q13319 367 aa12.13□□□□□ -0.47
CTSB-221ENST00000531502 SGCAQ16586 387 aa12.13□□□□□ -0.47
CTSB-221ENST00000531502 TREML4Q6UXN2 200 aa12.13□□□□□ -0.47
CTSB-221ENST00000531502 RBMS3Q6XE24 437 aaKnown RBP12.13□□□□□ -0.47
CTSB-221ENST00000531502 HDDC2Q7Z4H3 204 aa12.13□□□□□ -0.47
CTSB-221ENST00000531502 DHDDSQ86SQ9 333 aa12.13□□□□□ -0.47
CTSB-221ENST00000531502 PATL1Q86TB9 770 aaKnown RBP12.13□□□□□ -0.47
CTSB-221ENST00000531502 C1orf174Q8IYL3 243 aa12.13□□□□□ -0.47
CTSB-221ENST00000531502 ABHD4Q8TB40 342 aa12.13□□□□□ -0.47
CTSB-221ENST00000531502 DIRC2Q96SL1 478 aa12.13□□□□□ -0.47
CTSB-221ENST00000531502 OR2H1Q9GZK4 316 aa12.13□□□□□ -0.47
CTSB-221ENST00000531502 UNKLQ9H9P5 680 aaKnown RBP12.13□□□□□ -0.47
CTSB-221ENST00000531502 ZMAT3Q9HA38 289 aaKnown RBP12.13□□□□□ -0.47
CTSB-221ENST00000531502 PATZ1Q9HBE1 687 aaKnown RBP12.13□□□□□ -0.47
CTSB-221ENST00000531502 TMBIM4Q9HC24 238 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms