RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 IDSB3KWA1 339 aa16.3■□□□□ 0.2
LTBP3-210ENST00000528516 LINC01565O15544 149 aa16.3■□□□□ 0.2
LTBP3-210ENST00000528516 KNG1P01042 644 aa16.3■□□□□ 0.2
LTBP3-210ENST00000528516 HEXBP07686 556 aa16.3■□□□□ 0.2
LTBP3-210ENST00000528516 SMIM6P0DI80 62 aa16.3■□□□□ 0.2
LTBP3-210ENST00000528516 MAPK3P27361 379 aaPredicted RBP16.3■□□□□ 0.2
LTBP3-210ENST00000528516 PRSS3P35030 304 aa16.3■□□□□ 0.2
LTBP3-210ENST00000528516 ADPRHP54922 357 aa16.3■□□□□ 0.2
LTBP3-210ENST00000528516 PPP1CAP62136 330 aa16.3■□□□□ 0.2
LTBP3-210ENST00000528516 NFATC4Q14934 902 aa16.3■□□□□ 0.2
LTBP3-210ENST00000528516 ELOCQ15369 112 aa16.3■□□□□ 0.2
LTBP3-210ENST00000528516 GLT8D1Q68CQ7 371 aa16.3■□□□□ 0.2
LTBP3-210ENST00000528516 OR10K2Q6IF99 312 aa16.3■□□□□ 0.2
LTBP3-210ENST00000528516 MED25Q71SY5 747 aa16.3■□□□□ 0.2
LTBP3-210ENST00000528516 PGAP1Q75T13 922 aa16.3■□□□□ 0.2
LTBP3-210ENST00000528516 ANKRD33Q7Z3H0 272 aa16.3■□□□□ 0.2
LTBP3-210ENST00000528516 MFSD9Q8NBP5 474 aa16.3■□□□□ 0.2
LTBP3-210ENST00000528516 DIO2Q92813 273 aa16.3■□□□□ 0.2
LTBP3-210ENST00000528516 RSPRY1Q96DX4 576 aa16.3■□□□□ 0.2
LTBP3-210ENST00000528516 LCORQ96JN0 433 aaPredicted RBP16.3■□□□□ 0.2
LTBP3-210ENST00000528516 OR5H14A6NHG9 310 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 RFPL4AA6NLU0 287 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 RFPL4AL1F8VTS6 287 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 F10P00742 488 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 CEACAM5P06731 702 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 RPA2P15927 270 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 TACR3P29371 465 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 C9orf50Q5SZB4 431 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 RPL13AP3Q6NVV1 102 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 STK35Q8TDR2 534 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 TIMM29Q9BSF4 260 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 GAREM1Q9H706 876 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 SLC22A7Q9Y694 548 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 A0A0J9YY10 115 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 F5H5K5 113 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 MPIG6BO95866 241 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 PTAFRP25105 342 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 POU3F4P49335 361 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 RIDAP52758 137 aaKnown RBP16.29■□□□□ 0.2
LTBP3-210ENST00000528516 RNASE10Q5GAN6 216 aaKnown RBP16.29■□□□□ 0.2
LTBP3-210ENST00000528516 TMEM240Q5SV17 173 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 LILRA6Q6PI73 481 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 ADAMTSL4Q6UY14 1074 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 SPACA5Q96QH8 159 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 CFHR5Q9BXR6 569 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 CHST6Q9GZX3 395 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 TLNRD1Q9H1K6 362 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 LHX6Q9UPM6 363 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 MOKQ9UQ07 419 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 SNRNP200O75643 2136 aaKnown RBP16.29■□□□□ 0.2
LTBP3-210ENST00000528516 GLI4P10075 376 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 CD34P28906 385 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 PPIAP62937 165 aaKnown RBP16.29■□□□□ 0.2
LTBP3-210ENST00000528516 FABP9Q0Z7S8 132 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 ZNF528Q3MIS6 628 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 FBXO46Q6PJ61 603 aaPredicted RBP16.29■□□□□ 0.2
LTBP3-210ENST00000528516 MYADMQ96S97 322 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 ZNF649Q9BS31 505 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 GHRLQ9UBU3 117 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 MRPS2Q9Y399 296 aaKnown RBP16.29■□□□□ 0.2
LTBP3-210ENST00000528516 ALPK3Q96L96 1907 aa16.29■□□□□ 0.2
LTBP3-210ENST00000528516 TRAV1-2A0A0B4J238 106 aa16.28■□□□□ 0.2
LTBP3-210ENST00000528516 FITM1A5D6W6 292 aa16.28■□□□□ 0.2
LTBP3-210ENST00000528516 WRBO00258 174 aa16.28■□□□□ 0.2
LTBP3-210ENST00000528516 CTDSPLO15194 276 aa16.28■□□□□ 0.2
LTBP3-210ENST00000528516 CXCL10P02778 98 aa16.28■□□□□ 0.2
LTBP3-210ENST00000528516 CALCRP30988 508 aa16.28■□□□□ 0.2
LTBP3-210ENST00000528516 GUCA2AQ02747 115 aa16.28■□□□□ 0.2
LTBP3-210ENST00000528516 FAM76BQ5HYJ3 339 aa16.28■□□□□ 0.2
LTBP3-210ENST00000528516 FGF11Q92914 225 aa16.28■□□□□ 0.2
LTBP3-210ENST00000528516 EMC6Q9BV81 110 aa16.28■□□□□ 0.2
LTBP3-210ENST00000528516 POFUT1Q9H488 388 aa16.28■□□□□ 0.2
LTBP3-210ENST00000528516 RPS10P5Q9NQ39 176 aa16.28■□□□□ 0.2
LTBP3-210ENST00000528516 INPP5EQ9NRR6 644 aa16.28■□□□□ 0.2
LTBP3-210ENST00000528516 CD207Q9UJ71 328 aa16.28■□□□□ 0.2
LTBP3-210ENST00000528516 FAM96BQ9Y3D0 163 aa16.28■□□□□ 0.2
LTBP3-210ENST00000528516 LY86O95711 162 aa16.28■□□□□ 0.2
LTBP3-210ENST00000528516 RAB3DO95716 219 aa16.28■□□□□ 0.2
LTBP3-210ENST00000528516 MPGP29372 298 aa16.28■□□□□ 0.2
LTBP3-210ENST00000528516 DEFA6Q01524 100 aa16.28■□□□□ 0.2
LTBP3-210ENST00000528516 COL19A1Q14993 1142 aa16.28■□□□□ 0.2
LTBP3-210ENST00000528516 RFLNBQ8N5W9 214 aa16.28■□□□□ 0.2
LTBP3-210ENST00000528516 NXF5Q9H1B4 397 aaKnown RBP16.28■□□□□ 0.2
LTBP3-210ENST00000528516 EPHX3Q9H6B9 360 aa16.28■□□□□ 0.2
LTBP3-210ENST00000528516 FKRPQ9H9S5 495 aa16.28■□□□□ 0.2
LTBP3-210ENST00000528516 PTPRDP23468 1912 aa16.28■□□□□ 0.2
LTBP3-210ENST00000528516 A0A1B0GTH9 108 aa16.28■□□□□ 0.2
LTBP3-210ENST00000528516 CSTBP04080 98 aaKnown RBP16.28■□□□□ 0.2
LTBP3-210ENST00000528516 DCNP07585 359 aaKnown RBP16.28■□□□□ 0.2
LTBP3-210ENST00000528516 CXADRP78310 365 aa16.28■□□□□ 0.2
LTBP3-210ENST00000528516 TDGQ13569 410 aa16.28■□□□□ 0.2
LTBP3-210ENST00000528516 EIF2B1Q14232 305 aaKnown RBP16.28■□□□□ 0.2
LTBP3-210ENST00000528516 EEF1A1P5Q5VTE0 462 aa16.28■□□□□ 0.2
LTBP3-210ENST00000528516 GKN2Q86XP6 184 aa16.28■□□□□ 0.2
LTBP3-210ENST00000528516 CGGBP1Q9UFW8 167 aaPredicted RBP16.28■□□□□ 0.2
LTBP3-210ENST00000528516 NOSIPQ9Y314 301 aaKnown RBP16.28■□□□□ 0.2
LTBP3-210ENST00000528516 BDP1A6H8Y1 2624 aa16.28■□□□□ 0.2
LTBP3-210ENST00000528516 M0QYG6 137 aa16.27■□□□□ 0.2
LTBP3-210ENST00000528516 MRPS10P82664 201 aaKnown RBP16.27■□□□□ 0.2
LTBP3-210ENST00000528516 ZMIZ1Q9ULJ6 1067 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms