RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 ZNF141Q15928 474 aa11.31□□□□□ -0.6
CAPN1-208ENST00000527323 POMZP3Q6PJE2 187 aa11.31□□□□□ -0.6
CAPN1-208ENST00000527323 GABRG1Q8N1C3 465 aa11.31□□□□□ -0.6
CAPN1-208ENST00000527323 STEAP2Q8NFT2 490 aa11.31□□□□□ -0.6
CAPN1-208ENST00000527323 SEC22AQ96IW7 307 aa11.31□□□□□ -0.6
CAPN1-208ENST00000527323 ZNF471Q9BX82 626 aaPredicted RBP11.31□□□□□ -0.6
CAPN1-208ENST00000527323 SAV1Q9H4B6 383 aaPredicted RBP11.31□□□□□ -0.6
CAPN1-208ENST00000527323 RENP00797 406 aa11.31□□□□□ -0.6
CAPN1-208ENST00000527323 ITGA5P08648 1049 aa11.31□□□□□ -0.6
CAPN1-208ENST00000527323 S1PR1P21453 382 aa11.31□□□□□ -0.6
CAPN1-208ENST00000527323 MPGP29372 298 aa11.31□□□□□ -0.6
CAPN1-208ENST00000527323 SDHAP31040 664 aa11.31□□□□□ -0.6
CAPN1-208ENST00000527323 SLC25A1P53007 311 aa11.31□□□□□ -0.6
CAPN1-208ENST00000527323 MC2RQ01718 297 aa11.31□□□□□ -0.6
CAPN1-208ENST00000527323 ISXQ2M1V0 245 aa11.31□□□□□ -0.6
CAPN1-208ENST00000527323 NPSR1Q6W5P4 371 aa11.31□□□□□ -0.6
CAPN1-208ENST00000527323 TAF8Q7Z7C8 310 aa11.31□□□□□ -0.6
CAPN1-208ENST00000527323 CDC20BQ86Y33 519 aa11.31□□□□□ -0.6
CAPN1-208ENST00000527323 ZNF595Q8IYB9 648 aa11.31□□□□□ -0.6
CAPN1-208ENST00000527323 PLPP7Q8NBV4 271 aa11.31□□□□□ -0.6
CAPN1-208ENST00000527323 PHOSPHO1Q8TCT1 267 aa11.31□□□□□ -0.6
CAPN1-208ENST00000527323 ELF4Q99607 663 aaPredicted RBP11.31□□□□□ -0.6
CAPN1-208ENST00000527323 LMF2Q9BU23 707 aaKnown RBP11.31□□□□□ -0.6
CAPN1-208ENST00000527323 ZMAT3Q9HA38 289 aaKnown RBP11.31□□□□□ -0.6
CAPN1-208ENST00000527323 SIT1Q9Y3P8 196 aa11.31□□□□□ -0.6
CAPN1-208ENST00000527323 FAM25EA8MYX2 175 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 C2orf74A8MZ97 194 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 ZNF254O75437 659 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 ABHD16AO95870 558 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 UBBP0CG47 229 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 UBCP0CG48 685 aaKnown RBP11.3□□□□□ -0.6
CAPN1-208ENST00000527323 LIPCP11150 499 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 MGMTP16455 207 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 AGTR1P30556 359 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 CSF2RBP32927 897 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 LUMP51884 338 aaPredicted RBP11.3□□□□□ -0.6
CAPN1-208ENST00000527323 RPS27AP62979 156 aaKnown RBP11.3□□□□□ -0.6
CAPN1-208ENST00000527323 UBA52P62987 128 aaKnown RBP11.3□□□□□ -0.6
CAPN1-208ENST00000527323 SLC35D2Q76EJ3 337 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 PARGQ86W56 976 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 TMEM185AQ8NFB2 350 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 BAHD1Q8TBE0 780 aaPredicted RBP11.3□□□□□ -0.6
CAPN1-208ENST00000527323 MARC2Q969Z3 335 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 RELTQ969Z4 430 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 WDR92Q96MX6 357 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 VSTM2LQ96N03 204 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 INTS14Q96SY0 518 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 POTEKPQ9BYX7 375 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 SYT4Q9H2B2 425 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 ELOVL3Q9HB03 270 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 FBXO4Q9UKT5 387 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 NOP16Q9Y3C1 178 aaKnown RBP11.3□□□□□ -0.6
CAPN1-208ENST00000527323 IGKV1D-42A0A075B6H8 117 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 LOC100509620A0A075B734 347 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 A0A0A6YYC8 382 aaPredicted RBP11.3□□□□□ -0.6
CAPN1-208ENST00000527323 FAM74A7A6NL05 159 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 I3L1I5 382 aaPredicted RBP11.3□□□□□ -0.6
CAPN1-208ENST00000527323 PMS2P2O95744 297 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 WNT11O96014 354 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 ACTBP60709 375 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 ACTG1P63261 375 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 RASGEF1BQ0VAM2 473 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 ZNF74Q16587 644 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 FAM74A3Q4VXF1 159 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 TMEM205Q6UW68 189 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 DNM1P46Q6ZS02 220 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 EIF4E3Q8N5X7 224 aaKnown RBP11.3□□□□□ -0.6
CAPN1-208ENST00000527323 BCORP1Q8N888 145 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 DCBLD2Q96PD2 775 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 ERVK-19Q9WJR5 959 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 SLC22A13Q9Y226 551 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 GVINP1Q7Z2Y8 2422 aa11.3□□□□□ -0.6
CAPN1-208ENST00000527323 TRBV5-7A0A0A0MS05 114 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 IGHV1OR15-9A0A0B4J2B8 117 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 A0A0D9SG52 128 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 LOC100289279A0A1B0GTE1 492 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 OR5H14A6NHG9 310 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 HCRTR1O43613 425 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 TPPPO94811 219 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 CTSBP07858 339 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 ALOX5APP20292 161 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 RAB3AP20336 220 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 TAS2R19P59542 299 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 RPS4XP62701 263 aaKnown RBP11.29□□□□□ -0.6
CAPN1-208ENST00000527323 DEFB133Q30KQ1 61 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 WDR38Q5JTN6 314 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 TMEM17Q86X19 198 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 PRSS35Q8N3Z0 413 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 BPIFCQ8NFQ6 507 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 ZNF563Q8TA94 476 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 PPP1R14AQ96A00 147 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 SCARF2Q96GP6 870 aaPredicted RBP11.29□□□□□ -0.6
CAPN1-208ENST00000527323 DGAT2Q96PD7 388 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 NPAS1Q99742 590 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 PTDSS2Q9BVG9 487 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 TINAGL1Q9GZM7 467 aaPredicted RBP11.29□□□□□ -0.6
CAPN1-208ENST00000527323 KCNG2Q9UJ96 466 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 SLC6A5Q9Y345 797 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 TMEM14AQ9Y6G1 99 aa11.29□□□□□ -0.6
CAPN1-208ENST00000527323 TRAV14DV4A0A0A6YYC5 116 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms