RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 SLC22A25Q6T423 547 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 KIRREL2Q6UWL6 708 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 CLEC18BQ6UXF7 455 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 ZNF730Q6ZMV8 503 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 HIST2H3AQ71DI3 136 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 SLC35D2Q76EJ3 337 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 FCRLAQ7L513 359 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 MRPL21Q7Z2W9 205 aaKnown RBP3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 C6orf120Q7Z4R8 191 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 GOLGA7Q7Z5G4 137 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 S100A7AQ86SG5 101 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 LRRTM1Q86UE6 522 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 PIM3Q86V86 326 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 NRROSQ86YC3 692 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 H1FOOQ8IZA3 346 aaPredicted RBP3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 C1orf87Q8N0U7 546 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 LYG1Q8N1E2 194 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 FSTL5Q8N475 847 aaPredicted RBP3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 JAGN1Q8N5M9 183 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 COMMD1Q8N668 190 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 FAM86B1Q8N7N1 296 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 ZNF614Q8N883 585 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 CCDC71LQ8N9Z2 235 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 CLEC18CQ8NCF0 446 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 TMEM161BQ8NDZ6 487 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 OR4S1Q8NGB4 309 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 OR52B6Q8NGF0 335 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 OR51D1Q8NGF3 324 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 OR10W1Q8NGF6 305 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 OR52J3Q8NH60 311 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 OR4S2Q8NH73 311 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 OR56B4Q8NH76 319 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 OR14L1PQ8NHC6 308 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 GNPDA2Q8TDQ7 276 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 SMAP2Q8WU79 429 aaPredicted RBP3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 RGP1Q92546 391 aaPredicted RBP3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 NSUN4Q96CB9 384 aaKnown RBP3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 RPUSD4Q96CM3 377 aaKnown RBP3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 DNAJC19Q96DA6 116 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 PGAM5Q96HS1 289 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 C4orf36Q96KX1 117 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 CCDC115Q96NT0 180 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 OR2V2Q96R30 315 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 OR52E6Q96RD3 313 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 EPYCQ99645 322 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 NRIP2Q9BQI9 281 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 SULT4A1Q9BR01 284 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 C11orf70Q9BRQ4 267 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 FAAP24Q9BTP7 215 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 THUMPD3Q9BV44 507 aaKnown RBP3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 ELOVL1Q9BW60 279 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 CDCA4Q9BXL8 241 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 FSD1LQ9BXM9 530 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 PKIBQ9C010 78 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 ARL6Q9H0F7 186 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 RAB6CQ9H0N0 254 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 SYT4Q9H2B2 425 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 RGCCQ9H4X1 137 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 MAGIXQ9H6Y5 334 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 CHODLQ9H9P2 273 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 MEAF6Q9HAF1 191 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 PLEKHA2Q9HB19 425 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 ADGRL4Q9HBW9 690 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 B3GAT2Q9NPZ5 323 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 MMP26Q9NRE1 261 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 DECR2Q9NUI1 292 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 RBM22Q9NW64 420 aaKnown RBP eCLIP3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 TMEM45AQ9NWC5 275 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 CNOT2Q9NZN8 540 aaKnown RBP3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 IL17CQ9P0M4 197 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 SEMA5BQ9P283 1151 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 MGAT4CQ9UBM8 478 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 RPS6KB2Q9UBS0 482 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 PLEKHB1Q9UF11 243 aaPredicted RBP3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 CLEC4EQ9ULY5 219 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 UBQLN1Q9UMX0 589 aaKnown RBP3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 PROCRQ9UNN8 238 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 SH2B3Q9UQQ2 575 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 ANGPT4Q9Y264 503 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 EXOGQ9Y2C4 368 aaKnown RBP3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 FAM96BQ9Y3D0 163 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 RBM7Q9Y580 266 aaKnown RBP3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 TIMM10BQ9Y5J6 103 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 SPIN1Q9Y657 262 aaPredicted RBP3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 KPTNQ9Y664 436 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 PXDNQ92626 1479 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 SLIT2O94813 1529 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 AHDC1Q5TGY3 1603 aaPredicted RBP3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 RGPD3A6NKT7 1758 aaPredicted RBP3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 RGPD4Q7Z3J3 1758 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 BTAF1O14981 1849 aa3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 ZNF646O15015 1829 aaPredicted RBP3.33□□□□□ -1.88
CLNS1A-209ENST00000527299 TRIP11Q15643 1979 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 TRAV30A0A087WSZ9 112 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 LOC105369274A0A096LPK9 316 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 IGHV2-70DA0A0C4DH43 119 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 ZCWPW2A0A1B0GU75 182 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 TRBC2A0A5B9 178 aa3.32□□□□□ -1.88
CLNS1A-209ENST00000527299 A4D1N5 150 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms