RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 SMIM30A4D0T7 59 aa16.7■□□□□ 0.26
SMPD1-203ENST00000527275 OGG1O15527 345 aa16.7■□□□□ 0.26
SMPD1-203ENST00000527275 RGS5O15539 181 aa16.7■□□□□ 0.26
SMPD1-203ENST00000527275 CPN1P15169 458 aa16.7■□□□□ 0.26
SMPD1-203ENST00000527275 AGFG1P52594 562 aaKnown RBP16.7■□□□□ 0.26
SMPD1-203ENST00000527275 LY6DQ14210 128 aa16.7■□□□□ 0.26
SMPD1-203ENST00000527275 CCDC190Q86UF4 302 aa16.7■□□□□ 0.26
SMPD1-203ENST00000527275 SNX29P2Q8IUI4 249 aa16.7■□□□□ 0.26
SMPD1-203ENST00000527275 PARP16Q8N5Y8 322 aa16.7■□□□□ 0.26
SMPD1-203ENST00000527275 GHSRQ92847 366 aa16.7■□□□□ 0.26
SMPD1-203ENST00000527275 PGLYRP3Q96LB9 341 aa16.7■□□□□ 0.26
SMPD1-203ENST00000527275 VSX1Q9NZR4 365 aaPredicted RBP16.7■□□□□ 0.26
SMPD1-203ENST00000527275 B9D1Q9UPM9 204 aa16.7■□□□□ 0.26
SMPD1-203ENST00000527275 FKBP7Q9Y680 259 aa16.7■□□□□ 0.26
SMPD1-203ENST00000527275 KIAA1549Q9HCM3 1950 aa16.69■□□□□ 0.26
SMPD1-203ENST00000527275 NPIPA2E9PIF3 369 aa16.69■□□□□ 0.26
SMPD1-203ENST00000527275 NPIPA3F8WFD2 350 aa16.69■□□□□ 0.26
SMPD1-203ENST00000527275 AQP7O14520 342 aa16.69■□□□□ 0.26
SMPD1-203ENST00000527275 DVL2O14641 736 aa16.69■□□□□ 0.26
SMPD1-203ENST00000527275 SMAD9O15198 467 aaKnown RBP16.69■□□□□ 0.26
SMPD1-203ENST00000527275 DNPH1O43598 174 aa16.69■□□□□ 0.26
SMPD1-203ENST00000527275 ETV6P41212 452 aa16.69■□□□□ 0.26
SMPD1-203ENST00000527275 IFITM3Q01628 133 aa16.69■□□□□ 0.26
SMPD1-203ENST00000527275 MELKQ14680 651 aa16.69■□□□□ 0.26
SMPD1-203ENST00000527275 SPANXN2Q5MJ10 180 aa16.69■□□□□ 0.26
SMPD1-203ENST00000527275 PDSS1Q5T2R2 415 aa16.69■□□□□ 0.26
SMPD1-203ENST00000527275 PLXDC2Q6UX71 529 aa16.69■□□□□ 0.26
SMPD1-203ENST00000527275 PXKQ7Z7A4 578 aa16.69■□□□□ 0.26
SMPD1-203ENST00000527275 ADPRHL1Q8NDY3 354 aa16.69■□□□□ 0.26
SMPD1-203ENST00000527275 CPNE4Q96A23 557 aaPredicted RBP16.69■□□□□ 0.26
SMPD1-203ENST00000527275 TIGARQ9NQ88 270 aa16.69■□□□□ 0.26
SMPD1-203ENST00000527275 A0A1W2PNV4 684 aa16.68■□□□□ 0.26
SMPD1-203ENST00000527275 SHISA3A0PJX4 238 aa16.68■□□□□ 0.26
SMPD1-203ENST00000527275 TNFSF8P32971 234 aa16.68■□□□□ 0.26
SMPD1-203ENST00000527275 CAV3P56539 151 aa16.68■□□□□ 0.26
SMPD1-203ENST00000527275 POU3F1Q03052 451 aaPredicted RBP16.68■□□□□ 0.26
SMPD1-203ENST00000527275 CDK5R1Q15078 307 aa16.68■□□□□ 0.26
SMPD1-203ENST00000527275 ZNF239Q16600 458 aaKnown RBP16.68■□□□□ 0.26
SMPD1-203ENST00000527275 RGS21Q2M5E4 152 aa16.68■□□□□ 0.26
SMPD1-203ENST00000527275 RPL22L1Q6P5R6 122 aaKnown RBP16.68■□□□□ 0.26
SMPD1-203ENST00000527275 CDC20BQ86Y33 519 aa16.68■□□□□ 0.26
SMPD1-203ENST00000527275 MS4A15Q8N5U1 240 aa16.68■□□□□ 0.26
SMPD1-203ENST00000527275 ROBO4Q8WZ75 1007 aa16.68■□□□□ 0.26
SMPD1-203ENST00000527275 FANCFQ9NPI8 374 aa16.68■□□□□ 0.26
SMPD1-203ENST00000527275 ACOXLQ9NUZ1 547 aa16.68■□□□□ 0.26
SMPD1-203ENST00000527275 KLHL13Q9P2N7 655 aa16.68■□□□□ 0.26
SMPD1-203ENST00000527275 RP1L1Q8IWN7 2480 aaPredicted RBP16.68■□□□□ 0.26
SMPD1-203ENST00000527275 SLC22A23A1A5C7 686 aa16.68■□□□□ 0.26
SMPD1-203ENST00000527275 SLC16A7O60669 478 aa16.68■□□□□ 0.26
SMPD1-203ENST00000527275 SULT1C4O75897 302 aa16.68■□□□□ 0.26
SMPD1-203ENST00000527275 ZNF684Q5T5D7 378 aa16.68■□□□□ 0.26
SMPD1-203ENST00000527275 ZNF324BQ6AW86 544 aaPredicted RBP16.68■□□□□ 0.26
SMPD1-203ENST00000527275 Q6ZNX1 250 aa16.68■□□□□ 0.26
SMPD1-203ENST00000527275 SNRNP40Q96DI7 357 aaKnown RBP16.68■□□□□ 0.26
SMPD1-203ENST00000527275 SMIM19Q96E16 107 aa16.68■□□□□ 0.26
SMPD1-203ENST00000527275 GPR137Q96N19 417 aa16.68■□□□□ 0.26
SMPD1-203ENST00000527275 NAA11Q9BSU3 229 aaPredicted RBP16.68■□□□□ 0.26
SMPD1-203ENST00000527275 WDR76Q9H967 626 aa16.68■□□□□ 0.26
SMPD1-203ENST00000527275 CAMK2AQ9UQM7 478 aa16.68■□□□□ 0.26
SMPD1-203ENST00000527275 SMG1Q96Q15 3661 aaKnown RBP16.68■□□□□ 0.26
SMPD1-203ENST00000527275 ERVH48-1M5A8F1 160 aa16.67■□□□□ 0.26
SMPD1-203ENST00000527275 PSMD9O00233 223 aa16.67■□□□□ 0.26
SMPD1-203ENST00000527275 GPANK1O95872 356 aa16.67■□□□□ 0.26
SMPD1-203ENST00000527275 PSMB10P40306 273 aa16.67■□□□□ 0.26
SMPD1-203ENST00000527275 KLRB1Q12918 225 aa16.67■□□□□ 0.26
SMPD1-203ENST00000527275 CCDC58Q4VC31 144 aa16.67■□□□□ 0.26
SMPD1-203ENST00000527275 PRR30Q53SZ7 412 aaPredicted RBP16.67■□□□□ 0.26
SMPD1-203ENST00000527275 PCSK4Q6UW60 755 aa16.67■□□□□ 0.26
SMPD1-203ENST00000527275 PLEKHG7Q6ZR37 379 aa16.67■□□□□ 0.26
SMPD1-203ENST00000527275 KCTD20Q7Z5Y7 419 aa16.67■□□□□ 0.26
SMPD1-203ENST00000527275 CEACAM19Q7Z692 300 aa16.67■□□□□ 0.26
SMPD1-203ENST00000527275 OR6N2Q8NGY6 317 aa16.67■□□□□ 0.26
SMPD1-203ENST00000527275 AP3S1Q92572 193 aa16.67■□□□□ 0.26
SMPD1-203ENST00000527275 SARAFQ96BY9 339 aa16.67■□□□□ 0.26
SMPD1-203ENST00000527275 OXGR1Q96P68 337 aa16.67■□□□□ 0.26
SMPD1-203ENST00000527275 INTS14Q96SY0 518 aa16.67■□□□□ 0.26
SMPD1-203ENST00000527275 SLC30A2Q9BRI3 323 aa16.67■□□□□ 0.26
SMPD1-203ENST00000527275 MARCH7Q9H992 704 aa16.67■□□□□ 0.26
SMPD1-203ENST00000527275 LAMP5Q9UJQ1 280 aa16.67■□□□□ 0.26
SMPD1-203ENST00000527275 EPG5Q9HCE0 2579 aa16.67■□□□□ 0.26
SMPD1-203ENST00000527275 TRBV2A0A0J9YWF9 115 aa16.67■□□□□ 0.26
SMPD1-203ENST00000527275 PRR32B1ATL7 298 aa16.67■□□□□ 0.26
SMPD1-203ENST00000527275 SFTPCP11686 197 aa16.67■□□□□ 0.26
SMPD1-203ENST00000527275 IFNGR1P15260 489 aa16.67■□□□□ 0.26
SMPD1-203ENST00000527275 EDNRAP25101 427 aa16.67■□□□□ 0.26
SMPD1-203ENST00000527275 CENPAP49450 140 aa16.67■□□□□ 0.26
SMPD1-203ENST00000527275 GDI2P50395 445 aaKnown RBP16.67■□□□□ 0.26
SMPD1-203ENST00000527275 MNTQ99583 582 aa16.67■□□□□ 0.26
SMPD1-203ENST00000527275 PRDM14Q9GZV8 571 aa16.67■□□□□ 0.26
SMPD1-203ENST00000527275 MED29Q9NX70 200 aa16.67■□□□□ 0.26
SMPD1-203ENST00000527275 PAQR5Q9NXK6 330 aaPredicted RBP16.67■□□□□ 0.26
SMPD1-203ENST00000527275 RASD1Q9Y272 281 aa16.67■□□□□ 0.26
SMPD1-203ENST00000527275 KLHDC2Q9Y2U9 406 aa16.67■□□□□ 0.26
SMPD1-203ENST00000527275 CMAHPQ9Y471 501 aa16.67■□□□□ 0.26
SMPD1-203ENST00000527275 hCG_2014768A0A024R1R8 64 aa16.66■□□□□ 0.26
SMPD1-203ENST00000527275 LOC102725191A0A1B0GVB3 256 aa16.66■□□□□ 0.26
SMPD1-203ENST00000527275 A6NIZ1 184 aa16.66■□□□□ 0.26
SMPD1-203ENST00000527275 SC5DO75845 299 aa16.66■□□□□ 0.26
SMPD1-203ENST00000527275 TACSTD2P09758 323 aa16.66■□□□□ 0.26
SMPD1-203ENST00000527275 ZNF43P17038 809 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms