RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 GRHL3Q8TE85 626 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 SLC35B4Q969S0 331 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 ADGRG7Q96K78 797 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 JSRP1Q96MG2 331 aaPredicted RBP3.97□□□□□ -1.77
USP48-211ENST00000526044 SEPHS2Q99611 448 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 FAM173AQ9BQD7 235 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 RSPO3Q9BXY4 272 aaPredicted RBP3.97□□□□□ -1.77
USP48-211ENST00000526044 RTN4RQ9BZR6 473 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 LAT2Q9GZY6 243 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 ADNPQ9H2P0 1102 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 DSN1Q9H410 356 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 DENND2DQ9H6A0 471 aaPredicted RBP3.97□□□□□ -1.77
USP48-211ENST00000526044 MAGIXQ9H6Y5 334 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 PTGES2Q9H7Z7 377 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 TMEM27Q9HBJ8 222 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 PROK2Q9HC23 129 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 SH2D2AQ9NP31 389 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 KLHL1Q9NR64 748 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 OLAHQ9NV23 265 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 MED11Q9P086 117 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 ANAPC2Q9UJX6 822 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 PRDM4Q9UKN5 801 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 AURKCQ9UQB9 309 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 SLC9A8Q9Y2E8 581 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 KLF13Q9Y2Y9 288 aaPredicted RBP3.97□□□□□ -1.77
USP48-211ENST00000526044 FAM32AQ9Y421 112 aaKnown RBP3.97□□□□□ -1.77
USP48-211ENST00000526044 CHCHD2Q9Y6H1 151 aaPredicted RBP3.97□□□□□ -1.77
USP48-211ENST00000526044 SESN1Q9Y6P5 492 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 V9GYQ6 96 aa3.97□□□□□ -1.77
USP48-211ENST00000526044 ARPC4-TTLL3A0A0A6YYG9 625 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 TRAV17A0A0B4J275 112 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 A0A1B0GUV1 79 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 TCRBV3S1A0A5B6 114 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 DHRS12A0PJE2 317 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 SMIM30A4D0T7 59 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 MAGEA13PA6NCF6 341 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 USP17L23D6RBM5 183 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 G3V3Y1 287 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 H0YHG0 523 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 K7EM74 188 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 CTDSP2O14595 271 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 GNGT2O14610 69 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 HCRTR2O43614 444 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 GMFGO60234 142 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 NME2P1O60361 137 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 FKBP6O75344 327 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 ENTPD5O75356 428 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 TRIM3O75382 744 aaPredicted RBP3.96□□□□□ -1.78
USP48-211ENST00000526044 SLC25A12O75746 678 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 TRAPPC6AO75865 159 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 NUDT14O95848 222 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 EPPINO95925 133 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 OPN1MWP04001 364 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 IFNW1P05000 195 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 GPIP06744 558 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 UBTFL6P0CB48 400 aaPredicted RBP3.96□□□□□ -1.78
USP48-211ENST00000526044 OPN1MW2P0DN77 364 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 OPN1MW3P0DN78 364 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 GP1BBP13224 206 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 UQCRBP14927 111 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 PGCP20142 388 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 ELAVL4P26378 380 aaKnown RBP3.96□□□□□ -1.78
USP48-211ENST00000526044 SLC6A8P48029 635 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 IDH2P48735 452 aaKnown RBP3.96□□□□□ -1.78
USP48-211ENST00000526044 DNASE1L1P49184 302 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 ERFP50548 548 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 CRYBA2P53672 197 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 RGS8P57771 180 aaPredicted RBP3.96□□□□□ -1.78
USP48-211ENST00000526044 COPZ1P61923 177 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 PLGLB1Q02325 96 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 POU3F1Q03052 451 aaPredicted RBP3.96□□□□□ -1.78
USP48-211ENST00000526044 ZNF117Q03924 483 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 CD226Q15762 336 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 EFNB3Q15768 340 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 KRT80Q6KB66 452 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 CBLN3Q6UW01 205 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 ENPP6Q6UWR7 440 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 Q6ZS92 163 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 SLC46A3Q7Z3Q1 461 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 VTCN1Q7Z7D3 282 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 RANBP3LQ86VV4 465 aaPredicted RBP3.96□□□□□ -1.78
USP48-211ENST00000526044 CYP4Z1Q86W10 505 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 CARM1Q86X55 608 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 WDSUB1Q8N9V3 476 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 OR2M7Q8NG81 312 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 OR2M3Q8NG83 312 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 OR4K17Q8NGC6 315 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 OR6T1Q8NGN1 323 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 ZNF563Q8TA94 476 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 VANGL1Q8TAA9 524 aaPredicted RBP3.96□□□□□ -1.78
USP48-211ENST00000526044 C9orf43Q8TAL5 461 aaPredicted RBP3.96□□□□□ -1.78
USP48-211ENST00000526044 SETD6Q8TBK2 473 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 GPR119Q8TDV5 335 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 RNF138Q8WVD3 245 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 CANT1Q8WVQ1 401 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 GEMIN6Q8WXD5 167 aaKnown RBP3.96□□□□□ -1.78
USP48-211ENST00000526044 TMEM234Q8WY98 164 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 STMN2Q93045 179 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 NTNG2Q96CW9 530 aa3.96□□□□□ -1.78
USP48-211ENST00000526044 ARSGQ96EG1 525 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms