RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 CD1CP29017 333 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 BDKRB1P46663 353 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 PLTPP55058 493 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 GPX6P59796 221 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 PPP1CAP62136 330 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 CUL1Q13616 776 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 GAMTQ14353 236 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 GRB7Q14451 532 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 C16orf72Q14CZ0 275 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 RAB35Q15286 201 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 TMED2Q15363 201 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 TGIF1Q15583 401 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 INAQ16352 499 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 ISXQ2M1V0 245 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 CCSMST1Q4G0I0 132 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 ACSBG2Q5FVE4 666 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 CNSTQ6PJW8 725 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 FAM159AQ6UWV7 190 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 C2orf66Q6UXQ4 117 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 SLC26A11Q86WA9 606 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 OOSP2Q86WS3 158 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 ZNF584Q8IVC4 421 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 CPNE9Q8IYJ1 553 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 CADM2Q8N3J6 435 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 SPERTQ8NA61 448 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 KLHL30-AS1Q8NEE0 82 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 OR5AR1Q8NGP9 310 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 OR10G6Q8NH81 332 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 CD200R1Q8TD46 325 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 PYROXD1Q8WU10 500 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 TMEM186Q96B77 213 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 TMEM159Q96B96 161 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 NRBF2Q96F24 287 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 C9orf72Q96LT7 481 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 GPR21Q99679 349 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 NRTNQ99748 197 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 TSSK1BQ9BXA7 367 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 OSBPL10Q9BXB5 764 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 CDC42EP4Q9H3Q1 356 aaKnown RBP2.92□□□□□ -1.94
CD44-219ENST00000525685 KIR3DX1Q9H7L2 352 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 SLC40A1Q9NP59 571 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 NINJ2Q9NZG7 142 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 GALPQ9UBC7 116 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 FBXO5Q9UKT4 447 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 VPS13AQ96RL7 3174 aa2.92□□□□□ -1.94
CD44-219ENST00000525685 TRBV7-9A0A0J9YWB2 115 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 FAM159BA6NKW6 160 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 E5RI56 91 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 TMX2-CTNND1H3BSU7 103 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 CASKO14936 926 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 ZW10O43264 779 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 SEC22BO75396 215 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 VPS26AO75436 327 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 WISP3O95389 354 aaPredicted RBP2.91□□□□□ -1.94
CD44-219ENST00000525685 C1orf105O95561 183 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 IGHV3-9P01782 118 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 IGFBP1P08833 259 aaPredicted RBP2.91□□□□□ -1.94
CD44-219ENST00000525685 RPSAP08865 295 aaKnown RBP2.91□□□□□ -1.94
CD44-219ENST00000525685 WNT2P09544 360 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 RHOXF2BP0C7M4 288 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 SDC1P18827 310 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 PEBP1P30086 187 aaKnown RBP2.91□□□□□ -1.94
CD44-219ENST00000525685 PRDX2P32119 198 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 SHMT2P34897 504 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 ACVR1BP36896 505 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 HSD17B2P37059 387 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 ASMTP46597 345 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 MNAT1P51948 309 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 KPNA2P52292 529 aaKnown RBP2.91□□□□□ -1.94
CD44-219ENST00000525685 CDKN2DP55273 166 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 GMFBP60983 142 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 PLOD1Q02809 727 aaPredicted RBP2.91□□□□□ -1.94
CD44-219ENST00000525685 PAX2Q02962 417 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 ZNF85Q03923 595 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 ZNF33BQ06732 778 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 PUDPQ08623 228 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 CD47Q08722 323 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 EIF3IQ13347 325 aaKnown RBP2.91□□□□□ -1.94
CD44-219ENST00000525685 KLHL38Q2WGJ6 581 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 TTLL9Q3SXZ7 439 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 TOR1AIP1Q5JTV8 583 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 FAM45BPQ6NSW5 357 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 WDR74Q6RFH5 385 aaPredicted RBP2.91□□□□□ -1.94
CD44-219ENST00000525685 ANGPTL8Q6UXH0 198 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 FAM92BQ6ZTR7 304 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 CTAGE3PQ8IX95 158 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 TBC1D21Q8IYX1 336 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 OR4D9Q8NGE8 314 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 OR5K2Q8NHB8 316 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 FAM45AQ8TCE6 357 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 GIPC3Q8TF64 312 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 SKA2Q8WVK7 121 aaPredicted RBP2.91□□□□□ -1.94
CD44-219ENST00000525685 ASZ1Q8WWH4 475 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 LCN9Q8WX39 176 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 IFT81Q8WYA0 676 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 TFGQ92734 400 aaPredicted RBP2.91□□□□□ -1.94
CD44-219ENST00000525685 CDKL2Q92772 493 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 VPS39Q96JC1 886 aa2.91□□□□□ -1.94
CD44-219ENST00000525685 TGM7Q96PF1 710 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms