RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 DEFA5Q01523 94 aa11.86□□□□□ -0.51
PCDHGB1-201ENST00000523390 CDK5R1Q15078 307 aa11.86□□□□□ -0.51
PCDHGB1-201ENST00000523390 RHBDD2Q6NTF9 364 aa11.86□□□□□ -0.51
PCDHGB1-201ENST00000523390 PXKQ7Z7A4 578 aa11.86□□□□□ -0.51
PCDHGB1-201ENST00000523390 ELMOD3Q96FG2 381 aa11.86□□□□□ -0.51
PCDHGB1-201ENST00000523390 ZNF175Q9Y473 711 aa11.86□□□□□ -0.51
PCDHGB1-201ENST00000523390 CCDC187A0A096LP49 1063 aa11.86□□□□□ -0.51
PCDHGB1-201ENST00000523390 ZNF814B7Z6K7 855 aa11.86□□□□□ -0.51
PCDHGB1-201ENST00000523390 PET100P0DJ07 73 aa11.86□□□□□ -0.51
PCDHGB1-201ENST00000523390 CCL4P13236 92 aa11.86□□□□□ -0.51
PCDHGB1-201ENST00000523390 UQCRC1P31930 480 aa11.86□□□□□ -0.51
PCDHGB1-201ENST00000523390 LSM11P83369 360 aaKnown RBP eCLIP11.86□□□□□ -0.51
PCDHGB1-201ENST00000523390 IL11RAQ14626 422 aa11.86□□□□□ -0.51
PCDHGB1-201ENST00000523390 EBPQ15125 230 aaKnown RBP11.86□□□□□ -0.51
PCDHGB1-201ENST00000523390 TMEM81Q6P7N7 255 aa11.86□□□□□ -0.51
PCDHGB1-201ENST00000523390 VHLLQ6RSH7 139 aa11.86□□□□□ -0.51
PCDHGB1-201ENST00000523390 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.86□□□□□ -0.51
PCDHGB1-201ENST00000523390 OR4D9Q8NGE8 314 aa11.86□□□□□ -0.51
PCDHGB1-201ENST00000523390 OR8D4Q8NGM9 314 aa11.86□□□□□ -0.51
PCDHGB1-201ENST00000523390 APH1AQ96BI3 265 aa11.86□□□□□ -0.51
PCDHGB1-201ENST00000523390 ZNF681Q96N22 645 aa11.86□□□□□ -0.51
PCDHGB1-201ENST00000523390 GNRHR2Q96P88 292 aa11.86□□□□□ -0.51
PCDHGB1-201ENST00000523390 TREM1Q9NP99 234 aa11.86□□□□□ -0.51
PCDHGB1-201ENST00000523390 DNAJB11Q9UBS4 358 aa11.86□□□□□ -0.51
PCDHGB1-201ENST00000523390 SGCEO43556 437 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 IRF2P14316 349 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 FKBP2P26885 142 aaKnown RBP11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 FOXL2P58012 376 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 OR10A3P58181 314 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 CDK5Q00535 292 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 AIMP2Q13155 320 aaKnown RBP11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 ANKRD37Q7Z713 158 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 TRAPPC6BQ86SZ2 158 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 SYS1Q8N2H4 156 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 IL1F10Q8WWZ1 152 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 LRRC46Q96FV0 321 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 A0A1B0GTQ1 180 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 H3BUI4 141 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 MSR1P21757 451 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 BLVRBP30043 206 aaPredicted RBP11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 MAP2K6P52564 334 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 RPS18P62269 152 aaKnown RBP11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 TNK1Q13470 666 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 GNMTQ14749 295 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 SIAH3Q8IW03 269 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 SLC22A24Q8N4F4 322 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 BHLHE23Q8NDY6 225 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 FAM71CQ8NEG0 241 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 STEAP2Q8NFT2 490 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 TAAR8Q969N4 342 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 LRFN5Q96NI6 719 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 PHB2Q99623 299 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 PRRT1Q99946 306 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 SYT3Q9BQG1 590 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 AKIP1Q9NQ31 210 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 OCIAD1Q9NX40 245 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 P4HTMQ9NXG6 502 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 FBXL4Q9UKA2 621 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 EXO1Q9UQ84 846 aaKnown RBP11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 GREB1Q4ZG55 1949 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 A0A0B4J203 849 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 TRAPPC2LH3BP13 241 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 TNFRSF10AO00220 468 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 PRAF2O60831 178 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 APEHP13798 732 aaKnown RBP11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 ELK1P19419 428 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 ZFP36L2P47974 494 aaKnown RBP11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 SIGLEC14Q08ET2 396 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 ZNF684Q5T5D7 378 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 ZNF679Q8IYX0 411 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 OR6V1Q8N148 313 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 OR6M1Q8NGM8 313 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 OR51E1Q8TCB6 317 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 TCEAL3Q969E4 200 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 RAB3CQ96E17 227 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 SPACA5Q96QH8 159 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 TAAR9Q96RI9 348 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 SIGLEC11Q96RL6 698 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 DOK1Q99704 481 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 METTL9Q9H1A3 318 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 C12orf4Q9NQ89 552 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 B9D1Q9UPM9 204 aa11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 PDCD11Q14690 1871 aaKnown RBP11.85□□□□□ -0.51
PCDHGB1-201ENST00000523390 PTPN6P29350 595 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 GZMMP51124 257 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 NOVA1P51513 510 aaKnown RBP11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 SMIM19Q96E16 107 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 CMSS1Q9BQ75 279 aaKnown RBP11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 TAS2R4Q9NYW5 299 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 EHFQ9NZC4 300 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 CACNA1GO43497 2377 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 RTTNQ86VV8 2226 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 PLSCR5A0PG75 271 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 RFPL3O75679 317 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 MT-CO3P00414 261 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 PSMB1P20618 241 aaKnown RBP11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 CX3CR1P49238 355 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 IL13RA1P78552 427 aa11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 TRA2AQ13595 282 aaKnown RBP eCLIP11.84□□□□□ -0.51
PCDHGB1-201ENST00000523390 MEF2DQ14814 521 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms