RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 CT45A9P0DMV2 189 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 ECI1P42126 302 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 HBG1P69891 147 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 HBG2P69892 147 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 SYT14P1Q58G82 188 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 CT45A2Q5DJT8 189 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 CT45A1Q5HYN5 189 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 GLYATL3Q5SZD4 288 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 CYHR1Q6ZMK1 362 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 ZNF546Q86UE3 836 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 FBXL6Q8N531 539 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 DNAJC5GQ8N7S2 189 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 CT45A3Q8NHU0 189 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 ST7LQ8TDW4 575 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 ASH2LQ9UBL3 628 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 C17orf112F2Z3M2 114 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 SLC2A1P11166 492 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 CHATP28329 748 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 THBS3P49746 956 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 RPS27AP62979 156 aaKnown RBP14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 UBA52P62987 128 aaKnown RBP14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 DUSP2Q05923 314 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 GLIPR1L1Q6UWM5 242 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 IDO2Q6ZQW0 420 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 BCL2L10Q9HD36 194 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 SERTAD4Q9NUC0 356 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 CD300AQ9UGN4 299 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 FBXO4Q9UKT5 387 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 HRO43593 1189 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 GDNFP39905 211 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 AKR1C1Q04828 323 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 ACSM1Q08AH1 577 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 ZNF718Q3SXZ3 478 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 C9orf152Q5JTZ5 239 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 OR5AS1Q8N127 324 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 RPL3LQ92901 407 aaKnown RBP14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 FAM3DQ96BQ1 224 aa14.84□□□□□ -0.03
PCDHA3-201ENST00000522353 MDFIC2A0A1B0GVS7 189 aa14.83□□□□□ -0.03
PCDHA3-201ENST00000522353 NCR1O76036 304 aa14.83□□□□□ -0.03
PCDHA3-201ENST00000522353 SNRPGP62308 76 aaKnown RBP14.83□□□□□ -0.03
PCDHA3-201ENST00000522353 RBMXL3Q8N7X1 1067 aaKnown RBP14.83□□□□□ -0.03
PCDHA3-201ENST00000522353 TMEM43Q9BTV4 400 aa14.83□□□□□ -0.03
PCDHA3-201ENST00000522353 SMIM3Q9BZL3 60 aa14.83□□□□□ -0.03
PCDHA3-201ENST00000522353 AGPAT2O15120 278 aa14.83□□□□□ -0.04
PCDHA3-201ENST00000522353 KLK8O60259 260 aa14.83□□□□□ -0.04
PCDHA3-201ENST00000522353 SELENOFO60613 162 aa14.83□□□□□ -0.04
PCDHA3-201ENST00000522353 CTGFP29279 349 aa14.83□□□□□ -0.04
PCDHA3-201ENST00000522353 SHC1P29353 583 aa14.83□□□□□ -0.04
PCDHA3-201ENST00000522353 CYP4V2Q6ZWL3 525 aaPredicted RBP14.83□□□□□ -0.04
PCDHA3-201ENST00000522353 SLC22A11Q9NSA0 550 aa14.83□□□□□ -0.04
PCDHA3-201ENST00000522353 LTBP4Q8N2S1 1624 aa14.83□□□□□ -0.04
PCDHA3-201ENST00000522353 SCN9AQ15858 1988 aa14.83□□□□□ -0.04
PCDHA3-201ENST00000522353 LOC100289279A0A1B0GTE1 492 aa14.83□□□□□ -0.04
PCDHA3-201ENST00000522353 PAPLNO95428 1278 aa14.83□□□□□ -0.04
PCDHA3-201ENST00000522353 HNRNPFP52597 415 aaKnown RBP14.83□□□□□ -0.04
PCDHA3-201ENST00000522353 HTD2P86397 168 aa14.83□□□□□ -0.04
PCDHA3-201ENST00000522353 ADPRMQ3LIE5 342 aa14.83□□□□□ -0.04
PCDHA3-201ENST00000522353 NLRC3Q7RTR2 1065 aa14.83□□□□□ -0.04
PCDHA3-201ENST00000522353 ANGPTL5Q86XS5 388 aa14.83□□□□□ -0.04
PCDHA3-201ENST00000522353 CISD2Q8N5K1 135 aaKnown RBP14.83□□□□□ -0.04
PCDHA3-201ENST00000522353 WWTR1Q9GZV5 400 aa14.83□□□□□ -0.04
PCDHA3-201ENST00000522353 NTNG1Q9Y2I2 539 aa14.83□□□□□ -0.04
PCDHA3-201ENST00000522353 A0A0D9SG52 128 aa14.83□□□□□ -0.04
PCDHA3-201ENST00000522353 M0R135 149 aa14.83□□□□□ -0.04
PCDHA3-201ENST00000522353 M0R1B8 84 aa14.83□□□□□ -0.04
PCDHA3-201ENST00000522353 RFPL4BQ6ZWI9 263 aa14.83□□□□□ -0.04
PCDHA3-201ENST00000522353 ZNF799Q96GE5 643 aa14.83□□□□□ -0.04
PCDHA3-201ENST00000522353 RPP25Q9BUL9 199 aaKnown RBP14.83□□□□□ -0.04
PCDHA3-201ENST00000522353 OR11A1Q9GZK7 315 aa14.83□□□□□ -0.04
PCDHA3-201ENST00000522353 SHARPINQ9H0F6 387 aa14.83□□□□□ -0.04
PCDHA3-201ENST00000522353 EMC7Q9NPA0 242 aa14.83□□□□□ -0.04
PCDHA3-201ENST00000522353 GMPR2Q9P2T1 348 aaKnown RBP14.83□□□□□ -0.04
PCDHA3-201ENST00000522353 EXO1Q9UQ84 846 aaKnown RBP14.83□□□□□ -0.04
PCDHA3-201ENST00000522353 SSUH2Q9Y2M2 353 aa14.83□□□□□ -0.04
PCDHA3-201ENST00000522353 TRDV1A0A1B0GX56 115 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 XRCC2O43543 280 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 CNIH1O95406 144 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 DEFA4P12838 97 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 TGM4P49221 684 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 AGFG1P52594 562 aaKnown RBP14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 CARFQ8N187 725 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 SUMF2Q8NBJ7 301 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 OR52H1Q8NGJ2 320 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 OR52I1Q8NGK6 324 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 OR13F1Q8NGS4 319 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 OR2V1Q8NHB1 315 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 KISS1RQ969F8 398 aaPredicted RBP14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 RBMXL1Q96E39 390 aaKnown RBP14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 ZNF419Q96HQ0 510 aaPredicted RBP14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 TEX37Q96LM6 180 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 TEAD3Q99594 435 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 FAM173AQ9BQD7 235 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 KCNG2Q9UJ96 466 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 MYH14Q7Z406 1995 aaKnown RBP14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 EFSO43281 561 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 EPHA8P29322 1005 aaPredicted RBP14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 GUSBP11Q6P575 273 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 LYPD4Q6UWN0 246 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 GIMAP1Q8WWP7 306 aa14.82□□□□□ -0.04
PCDHA3-201ENST00000522353 SLAMF6Q96DU3 332 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms