RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 CYB5R3P00387 301 aaPredicted RBP7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 OPN1SWP03999 348 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 LINC00032P0C843 101 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 TAC1P20366 129 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 GRPRP30550 384 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 ARRB2P32121 409 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 CRHR1P34998 444 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 LIPAP38571 399 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 ETV4P43268 484 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 PITPNBP48739 271 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 PLTPP55058 493 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 PSG7Q13046 419 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 MAPK11Q15759 364 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 SYPL1Q16563 259 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 TBC1D28Q2M2D7 210 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 LSM12Q3MHD2 195 aaKnown RBP7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 RUNDC3AQ59EK9 446 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 TTMPQ5BVD1 217 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 XKR7Q5GH72 579 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 ATG16L1Q676U5 607 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 WBP2NLQ6ICG8 309 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 RFPL4BQ6ZWI9 263 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 NDUFA11Q86Y39 141 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 MIER2Q8N344 545 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 CADM2Q8N3J6 435 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 CCNYL1Q8N7R7 359 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 PAPD5Q8NDF8 572 aaKnown RBP7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 OR4F17Q8NGA8 305 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 ZNF420Q8TAQ5 688 aaPredicted RBP7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 LRTOMTQ8WZ04 291 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 SLC41A3Q96GZ6 507 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 SLC35G5Q96KT7 338 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 POM121L2Q96KW2 1035 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 OR4F4Q96R69 305 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 CYSLTR2Q9NS75 346 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 TMEM38BQ9NVV0 291 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 PPP1R3CQ9UQK1 317 aa7.26□□□□□ -1.25
TRAPPC9-212ENST00000521944 PLECQ15149 4684 aaKnown RBP7.25□□□□□ -1.25
TRAPPC9-212ENST00000521944 RNF103-CHMP3A0A140T963 221 aa7.25□□□□□ -1.25
TRAPPC9-212ENST00000521944 CDHR4A6H8M9 788 aa7.25□□□□□ -1.25
TRAPPC9-212ENST00000521944 G3V2L1 256 aa7.25□□□□□ -1.25
TRAPPC9-212ENST00000521944 HMGN4O00479 90 aa7.25□□□□□ -1.25
TRAPPC9-212ENST00000521944 AIM2O14862 343 aa7.25□□□□□ -1.25
TRAPPC9-212ENST00000521944 CFLARO15519 480 aa7.25□□□□□ -1.25
TRAPPC9-212ENST00000521944 AHSA1O95433 338 aa7.25□□□□□ -1.25
TRAPPC9-212ENST00000521944 VSIG10L2P0DP72 767 aa7.25□□□□□ -1.25
TRAPPC9-212ENST00000521944 CBLP22681 906 aa7.25□□□□□ -1.25
TRAPPC9-212ENST00000521944 SOAT1P35610 550 aa7.25□□□□□ -1.25
TRAPPC9-212ENST00000521944 HPCAL1P37235 193 aa7.25□□□□□ -1.25
TRAPPC9-212ENST00000521944 PMELP40967 661 aa7.25□□□□□ -1.25
TRAPPC9-212ENST00000521944 HOXA4Q00056 320 aaPredicted RBP7.25□□□□□ -1.25
TRAPPC9-212ENST00000521944 PRB3Q04118 309 aaPredicted RBP7.25□□□□□ -1.25
TRAPPC9-212ENST00000521944 ZNF404Q494X3 552 aa7.25□□□□□ -1.25
TRAPPC9-212ENST00000521944 GALNTL6Q49A17 601 aa7.25□□□□□ -1.25
TRAPPC9-212ENST00000521944 KLHL22Q53GT1 634 aa7.25□□□□□ -1.25
TRAPPC9-212ENST00000521944 MTX3Q5HYI7 312 aa7.25□□□□□ -1.25
TRAPPC9-212ENST00000521944 CRIP3Q6Q6R5 217 aa7.25□□□□□ -1.25
TRAPPC9-212ENST00000521944 FRMD7Q6ZUT3 714 aa7.25□□□□□ -1.25
TRAPPC9-212ENST00000521944 CALHM3Q86XJ0 350 aa7.25□□□□□ -1.25
TRAPPC9-212ENST00000521944 SLC22A9Q8IVM8 553 aa7.25□□□□□ -1.25
TRAPPC9-212ENST00000521944 CLIP4Q8N3C7 705 aa7.25□□□□□ -1.25
TRAPPC9-212ENST00000521944 OR2Z1Q8NG97 314 aa7.25□□□□□ -1.25
TRAPPC9-212ENST00000521944 OR4K5Q8NGD3 323 aa7.25□□□□□ -1.25
TRAPPC9-212ENST00000521944 OR6N1Q8NGY5 312 aa7.25□□□□□ -1.25
TRAPPC9-212ENST00000521944 TMEM54Q969K7 222 aa7.25□□□□□ -1.25
TRAPPC9-212ENST00000521944 PLEKHA8Q96JA3 519 aa7.25□□□□□ -1.25
TRAPPC9-212ENST00000521944 CLN8Q9UBY8 286 aa7.25□□□□□ -1.25
TRAPPC9-212ENST00000521944 ANKRD61A6NGH8 418 aa7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 PHYHO14832 338 aa7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 ENSAO43768 121 aaKnown RBP7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 FSTL3O95633 263 aa7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 CCNOP22674 350 aa7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 EPHA3P29320 983 aa7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 PSMB10P40306 273 aa7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 CALCOCO2Q13137 446 aa7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 UGT3A2Q3SY77 523 aa7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 GPAT3Q53EU6 434 aa7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 ATAD3BQ5T9A4 648 aa7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 C11orf88Q6PI97 169 aa7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 CYP2R1Q6VVX0 501 aa7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 RNF165Q6ZSG1 346 aa7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 KRT77Q7Z794 578 aa7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 VRK2Q86Y07 508 aa7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 UEVLDQ8IX04 471 aa7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 OR8B3Q8NGG8 313 aa7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 OR1J2Q8NGS2 313 aa7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 OR2V2Q96R30 315 aa7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 OR8B2Q96RD0 313 aa7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 DUSP26Q9BV47 211 aa7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 FUT8Q9BYC5 575 aa7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 C1orf198Q9H425 327 aa7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 POFUT1Q9H488 388 aa7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 A4GALTQ9NPC4 353 aa7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 B3GAT2Q9NPZ5 323 aa7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 SERTAD4Q9NUC0 356 aa7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 CTSZQ9UBR2 303 aa7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 IL19Q9UHD0 177 aa7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 EMCNQ9ULC0 261 aa7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 TMED5Q9Y3A6 229 aa7.24□□□□□ -1.25
TRAPPC9-212ENST00000521944 DNAJC15Q9Y5T4 150 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms