RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 NOXO1Q8NFA2 376 aa7.32□□□□□ -1.24
VPS13B-210ENST00000521932 OR6N1Q8NGY5 312 aa7.32□□□□□ -1.24
VPS13B-210ENST00000521932 OR4Q3Q8NH05 313 aa7.32□□□□□ -1.24
VPS13B-210ENST00000521932 RASD2Q96D21 266 aa7.32□□□□□ -1.24
VPS13B-210ENST00000521932 ALKBH3Q96Q83 286 aaPredicted RBP7.32□□□□□ -1.24
VPS13B-210ENST00000521932 RBP7Q96R05 134 aa7.32□□□□□ -1.24
VPS13B-210ENST00000521932 GABARAPL3Q9BY60 117 aa7.32□□□□□ -1.24
VPS13B-210ENST00000521932 RNPEPL1Q9HAU8 725 aa7.32□□□□□ -1.24
VPS13B-210ENST00000521932 SLC25A19Q9HC21 320 aa7.32□□□□□ -1.24
VPS13B-210ENST00000521932 GPR35Q9HC97 309 aa7.32□□□□□ -1.24
VPS13B-210ENST00000521932 B3GAT2Q9NPZ5 323 aa7.32□□□□□ -1.24
VPS13B-210ENST00000521932 CMC2Q9NRP2 79 aa7.32□□□□□ -1.24
VPS13B-210ENST00000521932 GFOD1Q9NXC2 390 aa7.32□□□□□ -1.24
VPS13B-210ENST00000521932 DUSP13Q9UII6 198 aa7.32□□□□□ -1.24
VPS13B-210ENST00000521932 SF3B6Q9Y3B4 125 aaKnown RBP7.32□□□□□ -1.24
VPS13B-210ENST00000521932 FLNCQ14315 2725 aa7.32□□□□□ -1.24
VPS13B-210ENST00000521932 DIDO1Q9BTC0 2240 aaKnown RBP7.32□□□□□ -1.24
VPS13B-210ENST00000521932 PCNX1Q96RV3 2341 aa7.32□□□□□ -1.24
VPS13B-210ENST00000521932 TENM4Q6N022 2769 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 IGKV1D-43A0A0B4J1Z2 117 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 OR6C68A6NDL8 312 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 ZAR1LA6NP61 321 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 C19orf84I3L1E1 186 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 DLGAP1O14490 977 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 LYZL6O75951 148 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 HMGN1P05114 100 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 PPP3CBP16298 524 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 POU1F1P28069 291 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 HOXC12P31275 282 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 CCKARP32238 428 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 GRK5P34947 590 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 POLR2IP36954 125 aaKnown RBP7.31□□□□□ -1.24
VPS13B-210ENST00000521932 RAD23AP54725 363 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 SH3BGRP55822 239 aaPredicted RBP7.31□□□□□ -1.24
VPS13B-210ENST00000521932 EGR3Q06889 387 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 TRIP10Q15642 601 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 CEACAM16Q2WEN9 425 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 PGGHGQ32M88 737 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 FREM1Q5H8C1 2179 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 TIMM23BQ5SRD1 257 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 SLC35F1Q5T1Q4 408 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 LCE1DQ5T752 114 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 LPCAT4Q643R3 524 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 LEG1Q6P5S2 330 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 ANKRD16Q6P6B7 361 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 ALPK2Q86TB3 2170 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 ZBTB46Q86UZ6 589 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 THNSL2Q86YJ6 484 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 C17orf78Q8N4C9 275 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 PACRGLQ8N7B6 248 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 NPEPL1Q8NDH3 523 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 STEAP2Q8NFT2 490 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 OR52E2Q8NGJ4 325 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 OR4K13Q8NH42 304 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 HSD17B8Q92506 261 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 RDH12Q96NR8 316 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 CLUHP3Q96NS8 147 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 NMNAT3Q96T66 252 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 FOXB1Q99853 325 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 ULBP2Q9BZM5 246 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 NDRG3Q9UGV2 375 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 KLHL21Q9UJP4 597 aa7.31□□□□□ -1.24
VPS13B-210ENST00000521932 RRP15Q9Y3B9 282 aaKnown RBP7.31□□□□□ -1.24
VPS13B-210ENST00000521932 HELZ2Q9BYK8 2649 aaKnown RBP7.31□□□□□ -1.24
VPS13B-210ENST00000521932 HCFC1P51610 2035 aa7.3□□□□□ -1.24
VPS13B-210ENST00000521932 MYO18BQ8IUG5 2567 aa7.3□□□□□ -1.24
VPS13B-210ENST00000521932 CIB4A0PJX0 185 aa7.3□□□□□ -1.24
VPS13B-210ENST00000521932 TUBAL3A6NHL2 446 aa7.3□□□□□ -1.24
VPS13B-210ENST00000521932 OR5H1A6NKK0 313 aa7.3□□□□□ -1.24
VPS13B-210ENST00000521932 PRSS44E7EML9 344 aa7.3□□□□□ -1.24
VPS13B-210ENST00000521932 SURF4O15260 269 aa7.3□□□□□ -1.24
VPS13B-210ENST00000521932 SLC2A10O95528 541 aa7.3□□□□□ -1.24
VPS13B-210ENST00000521932 ATP6V1G2O95670 118 aa7.3□□□□□ -1.24
VPS13B-210ENST00000521932 HPXP02790 462 aa7.3□□□□□ -1.24
VPS13B-210ENST00000521932 CDH2P19022 906 aaPredicted RBP7.3□□□□□ -1.24
VPS13B-210ENST00000521932 PAX7P23759 505 aa7.3□□□□□ -1.24
VPS13B-210ENST00000521932 PEX2P28328 305 aa7.3□□□□□ -1.24
VPS13B-210ENST00000521932 CRABP1P29762 137 aa7.3□□□□□ -1.24
VPS13B-210ENST00000521932 ARF1P84077 181 aaKnown RBP7.3□□□□□ -1.24
VPS13B-210ENST00000521932 FMODQ06828 376 aa7.3□□□□□ -1.24
VPS13B-210ENST00000521932 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.3□□□□□ -1.24
VPS13B-210ENST00000521932 CD47Q08722 323 aa7.3□□□□□ -1.24
VPS13B-210ENST00000521932 LRRC36Q1X8D7 754 aa7.3□□□□□ -1.24
VPS13B-210ENST00000521932 SLX4IPQ5VYV7 408 aa7.3□□□□□ -1.24
VPS13B-210ENST00000521932 TMEM236Q5W0B7 351 aa7.3□□□□□ -1.24
VPS13B-210ENST00000521932 C12orf73Q69YU5 71 aa7.3□□□□□ -1.24
VPS13B-210ENST00000521932 SP5Q6BEB4 398 aaPredicted RBP7.3□□□□□ -1.24
VPS13B-210ENST00000521932 FOXL2NBQ6ZUU3 175 aa7.3□□□□□ -1.24
VPS13B-210ENST00000521932 BHLHA15Q7RTS1 189 aaPredicted RBP7.3□□□□□ -1.24
VPS13B-210ENST00000521932 SSX8Q7RTT4 187 aa7.3□□□□□ -1.24
VPS13B-210ENST00000521932 CCDC36Q8IYA8 594 aa7.3□□□□□ -1.24
VPS13B-210ENST00000521932 OR6V1Q8N148 313 aa7.3□□□□□ -1.24
VPS13B-210ENST00000521932 IQCF1Q8N6M8 205 aa7.3□□□□□ -1.24
VPS13B-210ENST00000521932 SLC37A3Q8NCC5 494 aa7.3□□□□□ -1.24
VPS13B-210ENST00000521932 SDR9C7Q8NEX9 313 aa7.3□□□□□ -1.24
VPS13B-210ENST00000521932 OR1K1Q8NGR3 316 aa7.3□□□□□ -1.24
VPS13B-210ENST00000521932 CHAC2Q8WUX2 184 aa7.3□□□□□ -1.24
VPS13B-210ENST00000521932 BCL2L2Q92843 193 aaPredicted RBP7.3□□□□□ -1.24
VPS13B-210ENST00000521932 PTP4A1Q93096 173 aa7.3□□□□□ -1.24
VPS13B-210ENST00000521932 DACH2Q96NX9 599 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms