RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 RAD23AP54725 363 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 PSMD4P55036 377 aaKnown RBP2.77□□□□□ -1.97
VPS13B-209ENST00000521559 CASP9P55211 416 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 MTPNP58546 118 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 DSTNP60981 165 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 PSME3P61289 254 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 CBX1P83916 185 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 RBBP4Q09028 425 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 PLCXD2Q0VAA5 305 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 FUT5Q11128 374 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 KLRB1Q12918 225 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 BNIP1Q12981 228 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 FADDQ13158 208 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 CAMK2DQ13557 499 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 LY6DQ14210 128 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 GNA13Q14344 377 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 CAPRIN1Q14444 709 aaKnown RBP2.77□□□□□ -1.97
VPS13B-209ENST00000521559 TMEM187Q14656 261 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 MAPK11Q15759 364 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 ZNF141Q15928 474 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 ZNF630Q2M218 657 aaPredicted RBP2.77□□□□□ -1.97
VPS13B-209ENST00000521559 TRMT5Q32P41 509 aaKnown RBP2.77□□□□□ -1.97
VPS13B-209ENST00000521559 NADK2Q4G0N4 442 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 KLHL26Q53HC5 615 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 DCST2Q5T1A1 773 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 CCNJQ5T5M9 372 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 PRAMEF8Q5VWM4 474 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 PRAMEF7Q5VXH5 474 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 TMEM211Q6ICI0 200 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 TNFAIP8L2Q6P589 184 aaPredicted RBP2.77□□□□□ -1.97
VPS13B-209ENST00000521559 TEX38Q6PEX7 206 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 C6orf89Q6UWU4 347 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 ANGPTL8Q6UXH0 198 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 LRRC74BQ6ZQY2 392 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 C16orf62Q7Z3J2 963 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 NET1Q7Z628 596 aaPredicted RBP2.77□□□□□ -1.97
VPS13B-209ENST00000521559 DHDDSQ86SQ9 333 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 ZNF554Q86TJ5 538 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 CALHM3Q86XJ0 350 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 PGAM4Q8N0Y7 254 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 CYP4Z2PQ8N1L4 340 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 ZNF619Q8N2I2 560 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 FBXW8Q8N3Y1 598 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 ANKFN1Q8N957 763 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 TMEM178AQ8NBL3 297 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 OR10G3Q8NGC4 313 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 OR8J3Q8NGG0 315 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 OR5D16Q8NGK9 328 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 OR10S1Q8NGN2 331 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 OR4C3Q8NH37 302 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 MOSPD2Q8NHP6 518 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 FBXO30Q8TB52 745 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 GRHL3Q8TE85 626 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 PAQR8Q8TEZ7 354 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 CCDC107Q8WV48 283 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 RNF138Q8WVD3 245 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 PIK3R3Q92569 461 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 RAB8BQ92930 207 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 SLAMF9Q96A28 289 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 PNPLA2Q96AD5 504 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 ROPN1LQ96C74 230 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 NTNG2Q96CW9 530 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 RCN3Q96D15 328 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 OTUB1Q96FW1 271 aaPredicted RBP2.77□□□□□ -1.97
VPS13B-209ENST00000521559 RMND5BQ96G75 393 aaPredicted RBP2.77□□□□□ -1.97
VPS13B-209ENST00000521559 ZNF582Q96NG8 517 aaPredicted RBP2.77□□□□□ -1.97
VPS13B-209ENST00000521559 ANKRD27Q96NW4 1050 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 SIGLEC12Q96PQ1 595 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 TRNT1Q96Q11 434 aaKnown RBP2.77□□□□□ -1.97
VPS13B-209ENST00000521559 ECSITQ9BQ95 431 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 FAM173AQ9BQD7 235 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 GPATCH1Q9BRR8 931 aaKnown RBP2.77□□□□□ -1.97
VPS13B-209ENST00000521559 SLC39A3Q9BRY0 314 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 THUMPD3Q9BV44 507 aaKnown RBP2.77□□□□□ -1.97
VPS13B-209ENST00000521559 ANGPTL4Q9BY76 406 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 ZNF350Q9GZX5 532 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 HOXD1Q9GZZ0 328 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 IKZF5Q9H5V7 419 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 TMEM38AQ9H6F2 299 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 OPA3Q9H6K4 179 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 KAT8Q9H7Z6 458 aaKnown RBP2.77□□□□□ -1.97
VPS13B-209ENST00000521559 METTL7AQ9H8H3 244 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 MTHFD2LQ9H903 347 aaPredicted RBP2.77□□□□□ -1.97
VPS13B-209ENST00000521559 IL1RL2Q9HB29 575 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 PROK2Q9HC23 129 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 BCL2L10Q9HD36 194 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 A4GALTQ9NPC4 353 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 POLE3Q9NRF9 147 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 SDHAF3Q9NRP4 125 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 UBQLN4Q9NRR5 601 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 NDE1Q9NXR1 346 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 CALML5Q9NZT1 146 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 FLRT3Q9NZU0 649 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 OSGIN1Q9UJX0 560 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 ABCG2Q9UNQ0 655 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 WDR45Q9Y484 360 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 CSAG2Q9Y5P2 127 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 CHCHD2Q9Y6H1 151 aaPredicted RBP2.77□□□□□ -1.97
VPS13B-209ENST00000521559 PTPRBP23467 1997 aa2.77□□□□□ -1.97
VPS13B-209ENST00000521559 NCOR2Q9Y618 2525 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms