RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 STOMP27105 288 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 HSD17B2P37059 387 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 NAA10P41227 235 aaPredicted RBP2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 TNNT2P45379 298 aaPredicted RBP2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 VDAC2P45880 294 aaPredicted RBP2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 GPR6P46095 362 aaPredicted RBP2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 TMED10P49755 219 aaKnown RBP2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 FGF8P55075 233 aaPredicted RBP2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 NDPQ00604 133 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 LIPEQ05469 1076 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 MERTKQ12866 999 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 KIAA0087Q14695 138 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 TGFBIQ15582 683 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 ATP6AP1Q15904 470 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 KYAT1Q16773 422 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 SOHLH1Q5JUK2 328 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 OTPQ5XKR4 325 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 SPECC1LQ69YQ0 1117 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 C22orf42Q6IC83 251 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 RNF165Q6ZSG1 346 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 LUZP2Q86TE4 346 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 KATNAL2Q8IYT4 538 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 IQCKQ8N0W5 287 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 PNKDQ8N490 385 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 FNDC5Q8NAU1 212 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 C20orf203Q8NBC4 194 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 C8orf44Q96CB5 159 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 SLC29A1Q99808 456 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 RARRES2Q99969 163 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 BCL7BQ9BQE9 202 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 RIOK1Q9BRS2 568 aaKnown RBP2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 PELOQ9BRX2 385 aaKnown RBP2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 CNPY3Q9BT09 278 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 OR11A1Q9GZK7 315 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 GBA3Q9H227 469 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 NXF3Q9H4D5 531 aaKnown RBP2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 PTGES2Q9H7Z7 377 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 LYRM4Q9HD34 91 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 PDP1Q9P0J1 537 aaPredicted RBP2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 BTNL2Q9UIR0 455 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 NAP1L2Q9ULW6 460 aaPredicted RBP2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 PACSIN2Q9UNF0 486 aaPredicted RBP2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 TP53TG5Q9Y2B4 290 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 F11RQ9Y624 299 aaKnown RBP2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 CDK5RAP2Q96SN8 1893 aa2.37□□□□□ -2.03
HMGN1P28-201ENST00000521340 PLEKHG1Q9ULL1 1385 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 BCORQ6W2J9 1755 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 OVOS2A0A0G2JMS6 1433 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 ANKARQ7Z5J8 1434 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 LRP5O75197 1615 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 CICQ96RK0 1608 aaPredicted RBP2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 NUP98P52948 1817 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 KCNE1BA0A087WTH5 132 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 A0A0G2JN53 185 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 A0A1B0GVI7 797 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 A0A1B0GVY2 172 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 TMEM110-MUSTN1A8MSY1 372 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 TEX46H3BTG2 121 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 L7N2F9 121 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 EIF4E2O60573 245 aaKnown RBP2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 EIF3GO75821 320 aaKnown RBP eCLIP2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 MOSP00540 346 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 ERCC1P07992 297 aaPredicted RBP2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 ANXA5P08758 320 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 STAG3L3P0CL85 134 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 TNNI1P19237 187 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 GSTM3P21266 225 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 COX7A1P24310 79 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 CDKN1BP46527 198 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 SLC11A1P49279 550 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 SSR4P51571 173 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 RAB10P61026 200 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 SELENOTP62341 195 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 PAX5Q02548 391 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 REG3AQ06141 175 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 IL18Q14116 193 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 HERPUD1Q15011 391 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 ZNF630Q2M218 657 aaPredicted RBP2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 FHL5Q5TD97 284 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 REEP3Q6NUK4 255 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 ACP7Q6ZNF0 438 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 ZNF571Q7Z3V5 609 aaPredicted RBP2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 THOC6Q86W42 341 aaKnown RBP2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 PLA2G4DQ86XP0 818 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 ZNF740Q8NDX6 193 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 BPIFCQ8NFQ6 507 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 NPBQ8NG41 125 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 OR4A4PQ8NGN8 299 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 OR9G1Q8NH87 305 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 FAM81AQ8TBF8 368 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 GLYATL2Q8WU03 294 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 PIBF1Q8WXW3 757 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 COL21A1Q96P44 957 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 NRIP2Q9BQI9 281 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 ELOVL6Q9H5J4 265 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 RANBP3Q9H6Z4 567 aaPredicted RBP2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 ISG20L2Q9H9L3 353 aaKnown RBP2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 EML4Q9HC35 981 aaKnown RBP2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 IL17CQ9P0M4 197 aa2.36□□□□□ -2.03
HMGN1P28-201ENST00000521340 PEF1Q9UBV8 284 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms