RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 SPACA5Q96QH8 159 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 HHLA2Q9UM44 414 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 ING4Q9UNL4 249 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 A0A1B0GVI7 797 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 AIPO00170 330 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 TO15178 435 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 P04436 131 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 GTF2F2P13984 249 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 GALP22466 123 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 RFC3P40938 356 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 SSR4P51571 173 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 C19orf57Q0VDD7 668 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 GLYATL3Q5SZD4 288 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 C6orf183Q5T699 404 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 STK35Q8TDR2 534 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 OR8B4Q96RC9 309 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 NMNAT2Q9BZQ4 307 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 PLSCR3Q9NRY6 295 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 TAS2R4Q9NYW5 299 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 FLVCR2Q9UPI3 526 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 CAMK2AQ9UQM7 478 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 LRP12Q9Y561 859 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 ZNF432O94892 652 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 TCRBP04435 133 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 STOMP27105 288 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 POU3F4P49335 361 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 PCGF3Q3KNV8 242 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 SLC22A10Q63ZE4 541 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 B3GNTL1Q67FW5 361 aaPredicted RBP10.2□□□□□ -0.78
CLK4-206ENST00000520878 C3orf33Q6P1S2 294 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 CDC20BQ86Y33 519 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 OR1J4Q8NGS1 313 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 OR6F1Q8NGZ6 308 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 NUBPLQ8TB37 319 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 ASB17Q8WXJ9 295 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 JAM3Q9BX67 310 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 ZNF69Q9UC07 566 aa10.2□□□□□ -0.78
CLK4-206ENST00000520878 IGHG1P01857 330 aa10.19□□□□□ -0.78
CLK4-206ENST00000520878 LCN1P31025 176 aa10.19□□□□□ -0.78
CLK4-206ENST00000520878 RPS15P62841 145 aaKnown RBP10.19□□□□□ -0.78
CLK4-206ENST00000520878 FCN2Q15485 313 aa10.19□□□□□ -0.78
CLK4-206ENST00000520878 SCGB2B2Q4G0G5 96 aa10.19□□□□□ -0.78
CLK4-206ENST00000520878 TMEM164Q5U3C3 297 aa10.19□□□□□ -0.78
CLK4-206ENST00000520878 TMED4Q7Z7H5 227 aa10.19□□□□□ -0.78
CLK4-206ENST00000520878 GLB1L2Q8IW92 636 aa10.19□□□□□ -0.78
CLK4-206ENST00000520878 OR13C9Q8NGT0 318 aa10.19□□□□□ -0.78
CLK4-206ENST00000520878 TTC9Q92623 222 aa10.19□□□□□ -0.78
CLK4-206ENST00000520878 FGGYQ96C11 551 aa10.19□□□□□ -0.78
CLK4-206ENST00000520878 RNF170Q96K19 258 aa10.19□□□□□ -0.78
CLK4-206ENST00000520878 GPX7Q96SL4 187 aaPredicted RBP10.19□□□□□ -0.78
CLK4-206ENST00000520878 ASH2LQ9UBL3 628 aa10.19□□□□□ -0.78
CLK4-206ENST00000520878 OR52A1Q9UKL2 312 aa10.19□□□□□ -0.78
CLK4-206ENST00000520878 ARPC1BO15143 372 aaKnown RBP10.19□□□□□ -0.78
CLK4-206ENST00000520878 GGTLC2Q14390 218 aa10.19□□□□□ -0.78
CLK4-206ENST00000520878 ISXQ2M1V0 245 aa10.19□□□□□ -0.78
CLK4-206ENST00000520878 ABHD12BQ7Z5M8 362 aaPredicted RBP10.19□□□□□ -0.78
CLK4-206ENST00000520878 NOXA1Q86UR1 476 aa10.19□□□□□ -0.78
CLK4-206ENST00000520878 DVL3Q92997 716 aaPredicted RBP10.19□□□□□ -0.78
CLK4-206ENST00000520878 C4orf45Q96LM5 186 aa10.19□□□□□ -0.78
CLK4-206ENST00000520878 PTDSS2Q9BVG9 487 aa10.19□□□□□ -0.78
CLK4-206ENST00000520878 STRADBQ9C0K7 418 aa10.19□□□□□ -0.78
CLK4-206ENST00000520878 VSX1Q9NZR4 365 aaPredicted RBP10.19□□□□□ -0.78
CLK4-206ENST00000520878 OR4C45A6NMZ5 311 aa10.19□□□□□ -0.78
CLK4-206ENST00000520878 UPK3AO75631 287 aa10.19□□□□□ -0.78
CLK4-206ENST00000520878 GUSBP08236 651 aa10.19□□□□□ -0.78
CLK4-206ENST00000520878 HCKP08631 526 aa10.19□□□□□ -0.78
CLK4-206ENST00000520878 GSTT2P0CG29 244 aa10.19□□□□□ -0.78
CLK4-206ENST00000520878 GSTT2BP0CG30 244 aa10.19□□□□□ -0.78
CLK4-206ENST00000520878 TMIGD3P0DMS9 266 aaPredicted RBP10.19□□□□□ -0.78
CLK4-206ENST00000520878 EGR3Q06889 387 aa10.19□□□□□ -0.78
CLK4-206ENST00000520878 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.19□□□□□ -0.78
CLK4-206ENST00000520878 LRRC75AQ8NAA5 344 aa10.19□□□□□ -0.78
CLK4-206ENST00000520878 C11orf40Q8WZ69 217 aa10.19□□□□□ -0.78
CLK4-206ENST00000520878 OR5V1Q9UGF6 321 aa10.19□□□□□ -0.78
CLK4-206ENST00000520878 PCNX3Q9H6A9 2034 aa10.19□□□□□ -0.78
CLK4-206ENST00000520878 H3BMH7 237 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 STK17BO94768 372 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 PNPP00491 289 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 QDPRP09417 244 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 RPS11P62280 158 aaKnown RBP eCLIP10.18□□□□□ -0.78
CLK4-206ENST00000520878 ZXDAP98168 799 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 MFGE8Q08431 387 aaPredicted RBP10.18□□□□□ -0.78
CLK4-206ENST00000520878 RAB11FIP2Q7L804 512 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 PXKQ7Z7A4 578 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 PIAS4Q8N2W9 510 aaPredicted RBP10.18□□□□□ -0.78
CLK4-206ENST00000520878 ESX1Q8N693 406 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 OR52N5Q8NH56 324 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 MFSD8Q8NHS3 518 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 SLC39A7Q92504 469 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 C12orf10Q9HB07 376 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 NXT1Q9UKK6 140 aaKnown RBP10.18□□□□□ -0.78
CLK4-206ENST00000520878 R4GN57 208 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 PHF3Q92576 2039 aaKnown RBP10.18□□□□□ -0.78
CLK4-206ENST00000520878 LOC107986453A0A1B0GWG9 222 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 MPLP40238 635 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 IL11RAQ14626 422 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 C5orf46Q6UWT4 87 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 MAMSTRQ6ZN01 415 aa10.18□□□□□ -0.78
CLK4-206ENST00000520878 IL22RA1Q8N6P7 574 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms