RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 MYH11P35749 1972 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 GOLGA8TH3BQL2 631 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 DCTN6O00399 190 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 ABCD4O14678 606 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 GYG2O15488 501 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 RNF13O43567 381 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 UGT1A9O60656 530 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 CRLF1O75462 422 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 PLEKHA8P1O95397 391 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 CST1P01037 141 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 GOLGA8HP0CJ92 632 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 RBMY1CP0DJD4 496 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 GATA1P15976 413 aaPredicted RBP5.57□□□□□ -1.52
LSM1-202ENST00000520286 IVDP26440 423 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 COILP38432 576 aaPredicted RBP5.57□□□□□ -1.52
LSM1-202ENST00000520286 DDOSTP39656 456 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 OPRD1P41143 372 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 ARPC4P59998 168 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 TGM3Q08188 693 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 DNAJC3Q13217 504 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 ORC2Q13416 577 aaPredicted RBP5.57□□□□□ -1.52
LSM1-202ENST00000520286 ARL6IP1Q15041 203 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 TGFBIQ15582 683 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 LPAL2Q16609 132 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 LRRC36Q1X8D7 754 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 ISXQ2M1V0 245 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 C15orf32Q32M92 178 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 GPRC6AQ5T6X5 926 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 MARC1Q5VT66 337 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 CARD17Q5XLA6 110 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 RWDD4Q6NW29 188 aaKnown RBP5.57□□□□□ -1.52
LSM1-202ENST00000520286 TMEM107Q6UX40 140 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 HSDL2Q6YN16 418 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 ACOT7LQ6ZUV0 252 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 OTUD6AQ7L8S5 288 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 BHLHA9Q7RTU4 235 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 ARPINQ7Z6K5 226 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 HPS6Q86YV9 775 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 DTX3LQ8TDB6 740 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 FAM222BQ8WU58 562 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 DNAJA4Q8WW22 397 aaPredicted RBP5.57□□□□□ -1.52
LSM1-202ENST00000520286 STARD8Q92502 1023 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 MCUR1Q96AQ8 359 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 FGGYQ96C11 551 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 PGLYRP4Q96LB8 373 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 CNN2Q99439 309 aaKnown RBP5.57□□□□□ -1.52
LSM1-202ENST00000520286 TSG101Q99816 390 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 C19orf24Q9BVV8 132 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 LRRC19Q9H756 370 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 UBAP1Q9NZ09 502 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 APOBEC3BQ9UH17 382 aaKnown RBP5.57□□□□□ -1.52
LSM1-202ENST00000520286 TRAF3IP3Q9Y228 551 aa5.57□□□□□ -1.52
LSM1-202ENST00000520286 ROBO3Q96MS0 1386 aa5.56□□□□□ -1.52
LSM1-202ENST00000520286 IGSF9BQ9UPX0 1349 aa5.56□□□□□ -1.52
LSM1-202ENST00000520286 ZSWIM8A7E2V4 1837 aa5.56□□□□□ -1.52
LSM1-202ENST00000520286 A0A075B6Q4 140 aa5.56□□□□□ -1.52
LSM1-202ENST00000520286 FUOMA2VDF0 154 aa5.56□□□□□ -1.52
LSM1-202ENST00000520286 HSD17B6O14756 317 aa5.56□□□□□ -1.52
LSM1-202ENST00000520286 SPAG7O75391 227 aa5.56□□□□□ -1.52
LSM1-202ENST00000520286 CRYGBP07316 175 aa5.56□□□□□ -1.52
LSM1-202ENST00000520286 GALP22466 123 aa5.56□□□□□ -1.52
LSM1-202ENST00000520286 NTSP30990 170 aa5.56□□□□□ -1.52
LSM1-202ENST00000520286 CDK9P50750 372 aaKnown RBP5.56□□□□□ -1.52
LSM1-202ENST00000520286 BCAP31P51572 246 aa5.56□□□□□ -1.52
LSM1-202ENST00000520286 PLP1P60201 277 aa5.56□□□□□ -1.52
LSM1-202ENST00000520286 PPIDQ08752 370 aaKnown RBP5.56□□□□□ -1.52
LSM1-202ENST00000520286 SPCS2Q15005 226 aa5.56□□□□□ -1.52
LSM1-202ENST00000520286 DNAL1Q4LDG9 190 aa5.56□□□□□ -1.52
LSM1-202ENST00000520286 OGFRL1Q5TC84 451 aaPredicted RBP5.56□□□□□ -1.52
LSM1-202ENST00000520286 OR2G6Q5TZ20 316 aa5.56□□□□□ -1.52
LSM1-202ENST00000520286 NIPAL1Q6NVV3 410 aa5.56□□□□□ -1.52
LSM1-202ENST00000520286 ARCQ7LC44 396 aa5.56□□□□□ -1.52
LSM1-202ENST00000520286 BLIDQ8IZY5 108 aa5.56□□□□□ -1.52
LSM1-202ENST00000520286 OR13F1Q8NGS4 319 aa5.56□□□□□ -1.52
LSM1-202ENST00000520286 ZPLD1Q8TCW7 415 aa5.56□□□□□ -1.52
LSM1-202ENST00000520286 SLC25A38Q96DW6 304 aa5.56□□□□□ -1.52
LSM1-202ENST00000520286 PLEKHA8Q96JA3 519 aa5.56□□□□□ -1.52
LSM1-202ENST00000520286 OXGR1Q96P68 337 aa5.56□□□□□ -1.52
LSM1-202ENST00000520286 KIR2DL4Q99706 377 aa5.56□□□□□ -1.52
LSM1-202ENST00000520286 GBA3Q9H227 469 aa5.56□□□□□ -1.52
LSM1-202ENST00000520286 NARFLQ9H6Q4 476 aa5.56□□□□□ -1.52
LSM1-202ENST00000520286 NIPAL2Q9H841 368 aa5.56□□□□□ -1.52
LSM1-202ENST00000520286 SLCO1B3Q9NPD5 702 aa5.56□□□□□ -1.52
LSM1-202ENST00000520286 UVRAGQ9P2Y5 699 aa5.56□□□□□ -1.52
LSM1-202ENST00000520286 STAP1Q9ULZ2 295 aa5.56□□□□□ -1.52
LSM1-202ENST00000520286 CAB39Q9Y376 341 aaPredicted RBP5.56□□□□□ -1.52
LSM1-202ENST00000520286 TIMM22Q9Y584 194 aa5.56□□□□□ -1.52
LSM1-202ENST00000520286 IGHV1OR15-1A0A075B7D0 117 aa5.55□□□□□ -1.52
LSM1-202ENST00000520286 A0A1W2PPV9 198 aa5.55□□□□□ -1.52
LSM1-202ENST00000520286 GFYI3L273 518 aa5.55□□□□□ -1.52
LSM1-202ENST00000520286 ZNF701M0R085 212 aaPredicted RBP5.55□□□□□ -1.52
LSM1-202ENST00000520286 DNALI1O14645 258 aaPredicted RBP5.55□□□□□ -1.52
LSM1-202ENST00000520286 LSM1O15116 133 aaKnown RBP5.55□□□□□ -1.52
LSM1-202ENST00000520286 TBL1XO60907 577 aa5.55□□□□□ -1.52
LSM1-202ENST00000520286 STAMBPO95630 424 aa5.55□□□□□ -1.52
LSM1-202ENST00000520286 THY1P04216 161 aa5.55□□□□□ -1.52
LSM1-202ENST00000520286 P04436 131 aa5.55□□□□□ -1.52
LSM1-202ENST00000520286 UCHL3P15374 230 aa5.55□□□□□ -1.52
LSM1-202ENST00000520286 TNNI1P19237 187 aa5.55□□□□□ -1.52
LSM1-202ENST00000520286 NPR2P20594 1047 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms