RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 CFLARO15519 480 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 EIF1BO60739 113 aaKnown RBP2.56□□□□□ -2
HMGB1P41-201ENST00000520234 HUS1O60921 280 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 SEC22BO75396 215 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 WBP4O75554 376 aaKnown RBP2.56□□□□□ -2
HMGB1P41-201ENST00000520234 GPX5O75715 221 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 OR2B3O76000 313 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 MPC2O95563 127 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 LGI1O95970 557 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 IGLV3-25P01717 112 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 FCER2P06734 321 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 MELTFP08582 738 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 FGF4P08620 206 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 FCGR3AP08637 254 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 HBQ1P09105 142 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 SLC35E2BP0CK96 405 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 THRBP10828 461 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 B4GALT1P15291 398 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 HOXB8P17481 243 aaPredicted RBP2.56□□□□□ -2
HMGB1P41-201ENST00000520234 IL1RNP18510 177 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 RAB3AP20336 220 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 BCL3P20749 454 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 ZP3P21754 424 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 TGFBR1P36897 503 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 SPAM1P38567 509 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 EIF1P41567 113 aaKnown RBP2.56□□□□□ -2
HMGB1P41-201ENST00000520234 MAP2K4P45985 399 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 TPMTP51580 245 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 SLC7A2P52569 658 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 GEMP55040 296 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 DAOAP59103 153 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 SSTP61278 116 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 MRPS15P82914 257 aaKnown RBP2.56□□□□□ -2
HMGB1P41-201ENST00000520234 C17orf67Q0P5P2 114 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 RPA4Q13156 261 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 ART3Q13508 389 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 PRPSAP1Q14558 356 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 HAGHQ16775 308 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 MICBQ29980 383 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 ANKRD55Q3KP44 614 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 DCAF12Q5T6F0 453 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 SYPL2Q5VXT5 272 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 TTC23Q5W5X9 447 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 HIST2H2AA3Q6FI13 130 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 RTL6Q6ICC9 239 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 PRMT9Q6P2P2 845 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 REG3GQ6UW15 175 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 TMEM107Q6UX40 140 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 CLEC20AQ6ZU45 233 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 RAB43Q86YS6 212 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 SERPINA12Q8IW75 414 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 FBXO16Q8IX29 292 aaPredicted RBP2.56□□□□□ -2
HMGB1P41-201ENST00000520234 CENPLQ8N0S6 344 aaPredicted RBP2.56□□□□□ -2
HMGB1P41-201ENST00000520234 PYROXD2Q8N2H3 581 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 CHCHD4Q8N4Q1 142 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 EIF4E3Q8N5X7 224 aaKnown RBP2.56□□□□□ -2
HMGB1P41-201ENST00000520234 GDPD1Q8N9F7 314 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 SUMF1Q8NBK3 374 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 OR4F5Q8NH21 305 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 OR52N1Q8NH53 320 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 RNASE8Q8TDE3 154 aaKnown RBP2.56□□□□□ -2
HMGB1P41-201ENST00000520234 ST7LQ8TDW4 575 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 SLC38A4Q969I6 547 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 PNPLA2Q96AD5 504 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 TADA1Q96BN2 335 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 SGK3Q96BR1 496 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 CCDC126Q96EE4 140 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 CXorf58Q96LI9 332 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 CCDC115Q96NT0 180 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 RBM14Q96PK6 669 aaKnown RBP2.56□□□□□ -2
HMGB1P41-201ENST00000520234 RBP7Q96R05 134 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 PKMYT1Q99640 499 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 PITX2Q99697 317 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 HOPXQ9BPY8 73 aaPredicted RBP2.56□□□□□ -2
HMGB1P41-201ENST00000520234 C19orf43Q9BQ61 176 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 MRPL57Q9BQC6 102 aaKnown RBP2.56□□□□□ -2
HMGB1P41-201ENST00000520234 ACBD6Q9BR61 282 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 SEC22CQ9BRL7 303 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 MARVELD1Q9BSK0 173 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 TAPBPLQ9BX59 468 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 SRRQ9GZT4 340 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 GABARAPL1Q9H0R8 117 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 ABCG4Q9H172 646 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 CXCL16Q9H2A7 254 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 CXXC4Q9H2H0 198 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 RHOJQ9H4E5 214 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 KAT8Q9H7Z6 458 aaKnown RBP2.56□□□□□ -2
HMGB1P41-201ENST00000520234 Q9HAA7 133 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 ACOT13Q9NPJ3 140 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 SDHAF3Q9NRP4 125 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 TREX1Q9NSU2 369 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 PIGVQ9NUD9 493 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 CLEC5AQ9NY25 188 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 ERVK-18Q9QC07 812 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 MBD2Q9UBB5 411 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 OR12D3Q9UGF7 316 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 NUFIP1Q9UHK0 495 aaKnown RBP2.56□□□□□ -2
HMGB1P41-201ENST00000520234 GLS2Q9UI32 602 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 STOML2Q9UJZ1 356 aa2.56□□□□□ -2
HMGB1P41-201ENST00000520234 CDH9Q9ULB4 789 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms