RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 MYPOPQ86VE0 399 aaPredicted RBP4.13□□□□□ -1.75
SDCBP-207ENST00000520168 MRPL41Q8IXM3 137 aaKnown RBP4.13□□□□□ -1.75
SDCBP-207ENST00000520168 BCL6BQ8N143 479 aaPredicted RBP4.13□□□□□ -1.75
SDCBP-207ENST00000520168 PRR18Q8N4B5 295 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 KLHL36Q8N4N3 616 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 SPICQ8N5J4 248 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 NATD1Q8N6N6 113 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 FAM71CQ8NEG0 241 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 FAM110DQ8TAY7 271 aaPredicted RBP4.13□□□□□ -1.75
SDCBP-207ENST00000520168 SLC35B4Q969S0 331 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 PPCDCQ96CD2 204 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 SLC7A6OSQ96CW6 309 aaPredicted RBP4.13□□□□□ -1.75
SDCBP-207ENST00000520168 CMTM5Q96DZ9 223 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 MTERF3Q96E29 417 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 FAM120BQ96EK7 910 aaKnown RBP4.13□□□□□ -1.75
SDCBP-207ENST00000520168 SLC47A1Q96FL8 570 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 C16orf58Q96GQ5 468 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 FAM71F1Q96KD3 344 aaPredicted RBP4.13□□□□□ -1.75
SDCBP-207ENST00000520168 ZNF385AQ96PM9 386 aaKnown RBP4.13□□□□□ -1.75
SDCBP-207ENST00000520168 TXN2Q99757 166 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 SYT3Q9BQG1 590 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 CCDC28BQ9BUN5 200 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 C20orf27Q9GZN8 174 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 SEC61A2Q9H9S3 476 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 HINT3Q9NQE9 182 aaKnown RBP4.13□□□□□ -1.75
SDCBP-207ENST00000520168 EXOSC3Q9NQT5 275 aaKnown RBP4.13□□□□□ -1.75
SDCBP-207ENST00000520168 POLE3Q9NRF9 147 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 ZCCHC3Q9NUD5 404 aaKnown RBP4.13□□□□□ -1.75
SDCBP-207ENST00000520168 ARL8BQ9NVJ2 186 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 AASSQ9UDR5 926 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 CD300AQ9UGN4 299 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 IL19Q9UHD0 177 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 BAIAP2L1Q9UHR4 511 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 DUSP13Q9UII6 198 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 LEF1Q9UJU2 399 aaPredicted RBP4.13□□□□□ -1.75
SDCBP-207ENST00000520168 ZNF225Q9UK10 706 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 RCE1Q9Y256 329 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 RAP2CQ9Y3L5 183 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 GPR45Q9Y5Y3 372 aa4.13□□□□□ -1.75
SDCBP-207ENST00000520168 NUP214P35658 2090 aaPredicted RBP4.13□□□□□ -1.75
SDCBP-207ENST00000520168 CSMD3Q7Z407 3707 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 IGLV3-9A0A075B6K5 115 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 TRAV6A0A075B6T7 132 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 A0A096LPI6 279 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 TMED7-TICAM2A0A0A6YYA0 188 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 ISPDA4D126 451 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 A6NLC8 198 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 TRPC5OSA6NMA1 111 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 ZNF99A8MXY4 864 aaPredicted RBP4.12□□□□□ -1.75
SDCBP-207ENST00000520168 NPIPB8E9PQR5 432 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 FAAHO00519 579 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 PPP6CO00743 305 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 DHHO43323 396 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 CIDEAO60543 219 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 CDC14BO60729 498 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 ENTPD5O75356 428 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 SLC43A1O75387 559 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 CYP7B1O75881 506 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 SUPT7LO94864 414 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 UBL3O95164 117 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 OR5F1O95221 314 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 RAB36O95755 333 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 GPANK1O95872 356 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 ZNF250P15622 560 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 ZNF14P17017 642 aaPredicted RBP4.12□□□□□ -1.75
SDCBP-207ENST00000520168 IMPDH1P20839 514 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 PRPH2P23942 346 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 PGM1P36871 562 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 MAGEB1P43366 347 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 PTDSS1P48651 473 aaKnown RBP4.12□□□□□ -1.75
SDCBP-207ENST00000520168 SELENOPP49908 381 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 CDH13P55290 713 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 ROR2Q01974 943 aaKnown RBP4.12□□□□□ -1.75
SDCBP-207ENST00000520168 PAX8Q06710 450 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 DYNC1I2Q13409 638 aaKnown RBP4.12□□□□□ -1.75
SDCBP-207ENST00000520168 PDE7AQ13946 482 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 NDUFAF6Q330K2 333 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 TMEM155Q4W5P6 130 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 ESCO2Q56NI9 601 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 NOXRED1Q6NXP6 359 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 NIPAL3Q6P499 406 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 EPGNQ6UW88 154 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 Q6YL49 198 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 GDPGP1Q6ZNW5 385 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 ZCCHC23Q6ZST2 131 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 CREB3L2Q70SY1 520 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 THAP5Q7Z6K1 395 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 GPR137CQ8N3F9 429 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 MFSD4AQ8N468 514 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 ZIC4Q8N9L1 334 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 LINC01006Q8NI28 216 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 PSMA8Q8TAA3 256 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 SYNPRQ8TBG9 265 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 TBC1D15Q8TC07 691 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 ENKURQ8TC29 256 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 SFXN5Q8TD22 340 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 SSMEM1Q8WWF3 244 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 CIDECQ96AQ7 238 aaPredicted RBP4.12□□□□□ -1.75
SDCBP-207ENST00000520168 MCUR1Q96AQ8 359 aa4.12□□□□□ -1.75
SDCBP-207ENST00000520168 UPRTQ96BW1 309 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms