RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 TEX13CA0A0J9YWL9 993 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 ANKRD20A5PA0PJZ0 165 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 C17orf105B2RV13 164 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 B4DGG1 531 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 TMEM150CB9EJG8 249 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 WRBO00258 174 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 ZNF593O00488 134 aaPredicted RBP4.54□□□□□ -1.68
SDC2-204ENST00000519914 GPR171O14626 319 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 GMDSO60547 372 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 OR2B3O76000 313 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 KRT33AO76009 404 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 ONECUT2O95948 504 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 RENP00797 406 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 MELTFP08582 738 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 ANXA3P12429 323 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 MAOAP21397 527 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 CD38P28907 300 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 RPL4P36578 427 aaKnown RBP4.54□□□□□ -1.68
SDC2-204ENST00000519914 AQP2P41181 271 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 NAA10P41227 235 aaPredicted RBP4.54□□□□□ -1.68
SDC2-204ENST00000519914 HCCSP53701 268 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 PNLIPRP2P54317 469 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 NXPH1P58417 271 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 CTXN1P60606 82 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 RAB4BP61018 213 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 HNRNPKP61978 463 aaKnown RBP eCLIP4.54□□□□□ -1.68
SDC2-204ENST00000519914 ROM1Q03395 351 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 RPL18Q07020 188 aaKnown RBP4.54□□□□□ -1.68
SDC2-204ENST00000519914 RASGEF1BQ0VAM2 473 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 ZP4Q12836 540 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 SQSTM1Q13501 440 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 C1orf61Q13536 156 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 SGCBQ16585 318 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 PCK2Q16822 640 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 NDUFAF6Q330K2 333 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 C14orf28Q4W4Y0 310 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 IGSF11Q5DX21 431 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 ZNF542PQ5EBM4 170 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 TEX30Q5JUR7 227 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 FAM166AQ6J272 317 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 STAC2Q6ZMT1 411 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 LINGO2Q7L985 606 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 FAM220AQ7Z4H9 259 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 PRSS42Q7Z5A4 293 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 ZNF761Q86XN6 746 aaPredicted RBP4.54□□□□□ -1.68
SDC2-204ENST00000519914 MISPQ8IVT2 679 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 DND1Q8IYX4 353 aaKnown RBP4.54□□□□□ -1.68
SDC2-204ENST00000519914 OR6V1Q8N148 313 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 SPICQ8N5J4 248 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 BMPERQ8N8U9 685 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 OR11H7Q8NGC8 314 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 OR2G2Q8NGZ5 317 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 ZNF519Q8TB69 540 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 ASB17Q8WXJ9 295 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 ASB13Q8WXK3 278 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 MMABQ96EY8 250 aaPredicted RBP4.54□□□□□ -1.68
SDC2-204ENST00000519914 SLC41A2Q96JW4 573 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 C4orf45Q96LM5 186 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 Q96M85 177 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 KLHL15Q96M94 604 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 TSPAN32Q96QS1 320 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 PDCD1LG2Q9BQ51 273 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 PTDSS2Q9BVG9 487 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 GPR174Q9BXC1 333 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 CACNG6Q9BXT2 260 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 TGIF2Q9GZN2 237 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 SPRTNQ9H040 489 aaPredicted RBP4.54□□□□□ -1.68
SDC2-204ENST00000519914 SLITRK2Q9H156 845 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 NXF5Q9H1B4 397 aaKnown RBP4.54□□□□□ -1.68
SDC2-204ENST00000519914 MED28Q9H204 178 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 HRASLSQ9HDD0 168 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 PCDHB16Q9NRJ7 776 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 SDHAF3Q9NRP4 125 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 CUTCQ9NTM9 273 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 NUDT15Q9NV35 164 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 UCKL1Q9NWZ5 548 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 GLTPQ9NZD2 209 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 KLHL9Q9P2J3 617 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 EIF3KQ9UBQ5 218 aaKnown RBP4.54□□□□□ -1.68
SDC2-204ENST00000519914 OR5V1Q9UGF6 321 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 GNG8Q9UK08 70 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 ING4Q9UNL4 249 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 PPIEQ9UNP9 301 aaKnown RBP4.54□□□□□ -1.68
SDC2-204ENST00000519914 PRELID3BQ9Y3B1 194 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 AK6Q9Y3D8 172 aaKnown RBP4.54□□□□□ -1.68
SDC2-204ENST00000519914 CDH23Q9H251 3354 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 C5orf42Q9H799 3197 aa4.54□□□□□ -1.68
SDC2-204ENST00000519914 IGLV3-12A0A075B6K2 115 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 TRAV6A0A075B6T7 132 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 A0A0A6YYH2 397 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 IGLV1-36A0A0B4J1U3 117 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 TMEM72A0PK05 275 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 A6NJ64 397 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 ZNF98A6NK75 572 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 SNRPGP15A8MWD9 76 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 G3V3Q6 166 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 ACOT7O00154 380 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 SULT1C2O00338 296 aa4.53□□□□□ -1.68
SDC2-204ENST00000519914 TOX3O15405 576 aaPredicted RBP4.53□□□□□ -1.68
SDC2-204ENST00000519914 FABP7O15540 132 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms