RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 FUT1P19526 365 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 CSTF2P33240 577 aaKnown RBP eCLIP4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 UGT2B10P36537 528 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 IFNGR2P38484 337 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 CD79BP40259 229 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 SOX3P41225 446 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 AMTP48728 403 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 SLC9A3P48764 834 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 RGS6P49758 472 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 CLK1P49759 484 aaKnown RBP4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 SMSP52788 366 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 C21orf59P57076 290 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 OR1D5P58170 312 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 BTG2P78543 158 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 CRYZQ08257 329 aaKnown RBP4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 FUT7Q11130 342 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 OR1Q1Q15612 314 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 NNATQ16517 81 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 NDUFAF6Q330K2 333 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 ARMCX4Q5H9R4 360 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 TCTE1Q5JU00 501 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 CLEC12AQ5QGZ9 265 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 PDZK1Q5T2W1 519 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 AADACL4Q5VUY2 407 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 RNLSQ5VYX0 342 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 PRR27Q6MZM9 219 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 CASP12Q6UXS9 341 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 PRSS42Q7Z5A4 293 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 RANBP3LQ86VV4 465 aaPredicted RBP4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 CLDN22Q8N7P3 220 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 NANOGP1Q8N7R0 232 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 ZNF611Q8N823 705 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 ZNF321PQ8N8H1 164 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 BBS1Q8NFJ9 593 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 OR6Q1Q8NGQ2 317 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 OR13C2Q8NGS9 318 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 OR1L3Q8NH93 324 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 FANK1Q8TC84 345 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 FNDC8Q8TC99 324 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 TRUB1Q8WWH5 349 aaKnown RBP4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 DNASE2BQ8WZ79 361 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 TSLPQ969D9 159 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 ST6GALNAC6Q969X2 333 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 MIB2Q96AX9 1013 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 LGALS12Q96DT0 336 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 TMEM80Q96HE8 168 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 SH3YL1Q96HL8 342 aaPredicted RBP4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 LRR1Q96L50 414 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 SAMD8Q96LT4 415 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 POLR2J2Q9GZM3 115 aaKnown RBP4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 SLC5A7Q9GZV3 580 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 RAB33BQ9H082 229 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 DCSTAMPQ9H295 470 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 ARMC7Q9H6L4 198 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 SLA2Q9H6Q3 261 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 CACYBPQ9HB71 228 aaKnown RBP4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 FBXO8Q9NRD0 319 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 CCDC59Q9P031 241 aaKnown RBP4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 DIMT1Q9UNQ2 313 aaKnown RBP4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 ERVK-19Q9WJR5 959 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 RPL36Q9Y3U8 105 aaKnown RBP4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 NINQ8N4C6 2090 aa4.28□□□□□ -1.72
CTNNA1-212ENST00000518919 ASXL3Q9C0F0 2248 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 SPTBP11277 2137 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 ABCA7Q8IZY2 2146 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 LY6G6EA0A0G2JKS1 128 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 LOC100506127A0A0U1RQW1 187 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 KRTAP9-6A0A140TA67 174 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 A0A1W2PPQ1 181 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 OR2M5A3KFT3 312 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 CCDC182A6NF36 153 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 TMEM221A6NGB7 291 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 TMEM150CB9EJG8 249 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 H0YIG0 161 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 M0R3G1 203 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 WWP2O00308 870 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 CCRL2O00421 344 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 KPNA4O00629 521 aaPredicted RBP4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 BHLHE40O14503 412 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 SLC30A4O14863 429 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 LRRTM2O43300 516 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 GPX5O75715 221 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 SERPINI2O75830 405 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 RAB36O95755 333 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 PNPP00491 289 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 RPLP0P05388 317 aaKnown RBP4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 HSMCR30P0CW71 290 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 CT45A8P0DMV1 189 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 CT45A9P0DMV2 189 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 PRF1P14222 555 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 FOSL2P15408 326 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 TBXA2RP21731 343 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 CD1CP29017 333 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 ETV5P41161 510 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 ACAA2P42765 397 aaKnown RBP4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 OR1D4P47884 311 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 RFX3P48380 749 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 SERPINB10P48595 397 aa4.27□□□□□ -1.73
CTNNA1-212ENST00000518919 ETV1P50549 477 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms