RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	SIGLEC7	Q9Y286	467 aa		20.83	■□□□□ 0.93
CNOT7-204	ENST00000518885	ADAM18	Q9Y3Q7	739 aa		20.83	■□□□□ 0.93
CNOT7-204	ENST00000518885	TIMM10B	Q9Y5J6	103 aa		20.83	■□□□□ 0.93
CNOT7-204	ENST00000518885	HIVEP2	P31629	2446 aa		20.82	■□□□□ 0.92
CNOT7-204	ENST00000518885		A0A1W2PPW3	197 aa		20.82	■□□□□ 0.92
CNOT7-204	ENST00000518885	TMEM129	A0AVI4	362 aa		20.82	■□□□□ 0.92
CNOT7-204	ENST00000518885	KRT36	O76013	467 aa		20.82	■□□□□ 0.92
CNOT7-204	ENST00000518885	LCK	P06239	509 aa		20.82	■□□□□ 0.92
CNOT7-204	ENST00000518885	ADRA2A	P08913	450 aa		20.82	■□□□□ 0.92
CNOT7-204	ENST00000518885	STOM	P27105	288 aa		20.82	■□□□□ 0.92
CNOT7-204	ENST00000518885	MSX2	P35548	267 aa	Predicted RBP	20.82	■□□□□ 0.92
CNOT7-204	ENST00000518885	GDI2	P50395	445 aa	Known RBP	20.82	■□□□□ 0.92
CNOT7-204	ENST00000518885	SMARCD3	Q6STE5	483 aa		20.82	■□□□□ 0.92
CNOT7-204	ENST00000518885	ARL9	Q6T311	187 aa		20.82	■□□□□ 0.92
CNOT7-204	ENST00000518885	LINC00471	Q8N535	108 aa		20.82	■□□□□ 0.92
CNOT7-204	ENST00000518885	NRIP3	Q9NQ35	241 aa		20.82	■□□□□ 0.92
CNOT7-204	ENST00000518885	PRSS37	A4D1T9	235 aa		20.81	■□□□□ 0.92
CNOT7-204	ENST00000518885	OR10H3	O60404	316 aa		20.81	■□□□□ 0.92
CNOT7-204	ENST00000518885	PTP4A3	O75365	173 aa		20.81	■□□□□ 0.92
CNOT7-204	ENST00000518885	LY6H	O94772	140 aa		20.81	■□□□□ 0.92
CNOT7-204	ENST00000518885	MT-ND5	P03915	603 aa		20.81	■□□□□ 0.92
CNOT7-204	ENST00000518885	DAO	P14920	347 aa		20.81	■□□□□ 0.92
CNOT7-204	ENST00000518885	ZNF32	P17041	273 aa		20.81	■□□□□ 0.92
CNOT7-204	ENST00000518885	LAP3	P28838	519 aa		20.81	■□□□□ 0.92
CNOT7-204	ENST00000518885	UCP2	P55851	309 aa		20.81	■□□□□ 0.92
CNOT7-204	ENST00000518885	KRR1	Q13601	381 aa	Known RBP	20.81	■□□□□ 0.92
CNOT7-204	ENST00000518885	FOXL2NB	Q6ZUU3	175 aa		20.81	■□□□□ 0.92
CNOT7-204	ENST00000518885	FAM122B	Q7Z309	247 aa		20.81	■□□□□ 0.92
CNOT7-204	ENST00000518885	ZDHHC21	Q8IVQ6	265 aa		20.81	■□□□□ 0.92
CNOT7-204	ENST00000518885	SNX33	Q8WV41	574 aa		20.81	■□□□□ 0.92
CNOT7-204	ENST00000518885		Q96M85	177 aa		20.81	■□□□□ 0.92
CNOT7-204	ENST00000518885	SYT3	Q9BQG1	590 aa		20.81	■□□□□ 0.92
CNOT7-204	ENST00000518885	SLCO1C1	Q9NYB5	712 aa		20.81	■□□□□ 0.92
CNOT7-204	ENST00000518885	IGKV1D-43	A0A0B4J1Z2	117 aa		20.8	■□□□□ 0.92
CNOT7-204	ENST00000518885	INAFM1	C9JVW0	142 aa		20.8	■□□□□ 0.92
CNOT7-204	ENST00000518885	FAM157B	P0CG42	384 aa		20.8	■□□□□ 0.92
CNOT7-204	ENST00000518885	APEH	P13798	732 aa	Known RBP	20.8	■□□□□ 0.92
CNOT7-204	ENST00000518885	CCNO	P22674	350 aa		20.8	■□□□□ 0.92
CNOT7-204	ENST00000518885	APEX1	P27695	318 aa	Known RBP	20.8	■□□□□ 0.92
CNOT7-204	ENST00000518885	RRM2	P31350	389 aa		20.8	■□□□□ 0.92
CNOT7-204	ENST00000518885	NR4A2	P43354	598 aa		20.8	■□□□□ 0.92
CNOT7-204	ENST00000518885	KLF3	P57682	345 aa	Predicted RBP	20.8	■□□□□ 0.92
CNOT7-204	ENST00000518885	SEC23B	Q15437	767 aa		20.8	■□□□□ 0.92
CNOT7-204	ENST00000518885	NKPD1	Q17RQ9	610 aa		20.8	■□□□□ 0.92
CNOT7-204	ENST00000518885	TMEM249	Q2WGJ8	235 aa		20.8	■□□□□ 0.92
CNOT7-204	ENST00000518885	DNM1P34	Q6PK57	102 aa		20.8	■□□□□ 0.92
CNOT7-204	ENST00000518885	SYNPR	Q8TBG9	265 aa		20.8	■□□□□ 0.92
CNOT7-204	ENST00000518885	FANK1	Q8TC84	345 aa		20.8	■□□□□ 0.92
CNOT7-204	ENST00000518885	PRPF19	Q9UMS4	504 aa	Known RBP	20.8	■□□□□ 0.92
CNOT7-204	ENST00000518885	TEX13C	A0A0J9YWL9	993 aa		20.79	■□□□□ 0.92
CNOT7-204	ENST00000518885	CCL2	P13500	99 aa		20.79	■□□□□ 0.92
CNOT7-204	ENST00000518885	FPR3	P25089	353 aa		20.79	■□□□□ 0.92
CNOT7-204	ENST00000518885	SLC6A6	P31641	620 aa		20.79	■□□□□ 0.92
CNOT7-204	ENST00000518885	SCRN3	Q0VDG4	424 aa		20.79	■□□□□ 0.92
CNOT7-204	ENST00000518885	IQCC	Q4KMZ1	466 aa		20.79	■□□□□ 0.92
CNOT7-204	ENST00000518885	MEST	Q5EB52	335 aa		20.79	■□□□□ 0.92
CNOT7-204	ENST00000518885	DHFR2	Q86XF0	187 aa		20.79	■□□□□ 0.92
CNOT7-204	ENST00000518885	CLDN22	Q8N7P3	220 aa		20.79	■□□□□ 0.92
CNOT7-204	ENST00000518885	UBASH3B	Q8TF42	649 aa		20.79	■□□□□ 0.92
CNOT7-204	ENST00000518885	FUZ	Q9BT04	418 aa		20.79	■□□□□ 0.92
CNOT7-204	ENST00000518885	OR2H1	Q9GZK4	316 aa		20.79	■□□□□ 0.92
CNOT7-204	ENST00000518885	POLE4	Q9NR33	117 aa		20.79	■□□□□ 0.92
CNOT7-204	ENST00000518885	ADAM21	Q9UKJ8	722 aa		20.79	■□□□□ 0.92
CNOT7-204	ENST00000518885	NDRG4	Q9ULP0	352 aa	Known RBP	20.79	■□□□□ 0.92
CNOT7-204	ENST00000518885	C5orf49	A4QMS7	147 aa		20.78	■□□□□ 0.92
CNOT7-204	ENST00000518885		H7C1C5	153 aa		20.78	■□□□□ 0.92
CNOT7-204	ENST00000518885	IMPA2	O14732	288 aa		20.78	■□□□□ 0.92
CNOT7-204	ENST00000518885	KHDRBS3	O75525	346 aa	Known RBP	20.78	■□□□□ 0.92
CNOT7-204	ENST00000518885	ZNF250	P15622	560 aa		20.78	■□□□□ 0.92
CNOT7-204	ENST00000518885	LCN6	P62502	163 aa		20.78	■□□□□ 0.92
CNOT7-204	ENST00000518885	PSG4	Q00888	419 aa		20.78	■□□□□ 0.92
CNOT7-204	ENST00000518885	GGTLC2	Q14390	218 aa		20.78	■□□□□ 0.92
CNOT7-204	ENST00000518885	CYP2R1	Q6VVX0	501 aa		20.78	■□□□□ 0.92
CNOT7-204	ENST00000518885	ZNF786	Q8N393	782 aa		20.78	■□□□□ 0.92
CNOT7-204	ENST00000518885	ICA1L	Q8NDH6	482 aa		20.78	■□□□□ 0.92
CNOT7-204	ENST00000518885	MAGIX	Q9H6Y5	334 aa		20.78	■□□□□ 0.92
CNOT7-204	ENST00000518885	YAE1D1	Q9NRH1	226 aa		20.78	■□□□□ 0.92
CNOT7-204	ENST00000518885	IER3IP1	Q9Y5U9	82 aa		20.78	■□□□□ 0.92
CNOT7-204	ENST00000518885	ARFGEF3	Q5TH69	2177 aa		20.78	■□□□□ 0.92
CNOT7-204	ENST00000518885		A0A096LNT2	108 aa		20.77	■□□□□ 0.92
CNOT7-204	ENST00000518885	VWC2L	B2RUY7	222 aa		20.77	■□□□□ 0.92
CNOT7-204	ENST00000518885	TXNDC12	O95881	172 aa		20.77	■□□□□ 0.92
CNOT7-204	ENST00000518885	ZNF26	P17031	533 aa	Predicted RBP	20.77	■□□□□ 0.92
CNOT7-204	ENST00000518885	CRABP1	P29762	137 aa		20.77	■□□□□ 0.92
CNOT7-204	ENST00000518885	GCH1	P30793	250 aa		20.77	■□□□□ 0.92
CNOT7-204	ENST00000518885	GZMK	P49863	264 aa		20.77	■□□□□ 0.92
CNOT7-204	ENST00000518885	ARHGDIA	P52565	204 aa		20.77	■□□□□ 0.92
CNOT7-204	ENST00000518885	KRTAP1-1	Q07627	177 aa		20.77	■□□□□ 0.92
CNOT7-204	ENST00000518885	TRIM25	Q14258	630 aa	Known RBP	20.77	■□□□□ 0.92
CNOT7-204	ENST00000518885	CYB5R2	Q6BCY4	276 aa		20.77	■□□□□ 0.92
CNOT7-204	ENST00000518885	PGM2L1	Q6PCE3	622 aa		20.77	■□□□□ 0.92
CNOT7-204	ENST00000518885	JAZF1	Q86VZ6	243 aa		20.77	■□□□□ 0.92
CNOT7-204	ENST00000518885	GLB1L2	Q8IW92	636 aa		20.77	■□□□□ 0.92
CNOT7-204	ENST00000518885	PAQR4	Q8N4S7	273 aa	Predicted RBP	20.77	■□□□□ 0.92
CNOT7-204	ENST00000518885	CPEB3	Q8NE35	698 aa	Known RBP	20.77	■□□□□ 0.92
CNOT7-204	ENST00000518885	OR1J1	Q8NGS3	322 aa		20.77	■□□□□ 0.92
CNOT7-204	ENST00000518885	GNPDA2	Q8TDQ7	276 aa		20.77	■□□□□ 0.92
CNOT7-204	ENST00000518885	RASD2	Q96D21	266 aa		20.77	■□□□□ 0.92
CNOT7-204	ENST00000518885	LRGUK	Q96M69	825 aa		20.77	■□□□□ 0.92
CNOT7-204	ENST00000518885	FOXN4	Q96NZ1	517 aa		20.77	■□□□□ 0.92

Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms