RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 CHRNB3Q05901 458 aa11.45□□□□□ -0.58
VEGFA-219ENST00000518824 MAD2L1BPQ15013 274 aaPredicted RBP11.45□□□□□ -0.58
VEGFA-219ENST00000518824 RFX4Q33E94 735 aa11.45□□□□□ -0.58
VEGFA-219ENST00000518824 NRN1LQ496H8 165 aa11.45□□□□□ -0.58
VEGFA-219ENST00000518824 TMEM255AQ5JRV8 349 aa11.45□□□□□ -0.58
VEGFA-219ENST00000518824 FAM205BPQ63HN1 556 aa11.45□□□□□ -0.58
VEGFA-219ENST00000518824 ZNF770Q6IQ21 691 aaPredicted RBP11.45□□□□□ -0.58
VEGFA-219ENST00000518824 C1orf94Q6P1W5 598 aa11.45□□□□□ -0.58
VEGFA-219ENST00000518824 PGM2L1Q6PCE3 622 aa11.45□□□□□ -0.58
VEGFA-219ENST00000518824 SMARCD3Q6STE5 483 aa11.45□□□□□ -0.58
VEGFA-219ENST00000518824 DPY19L2P2Q6ZN68 376 aa11.45□□□□□ -0.58
VEGFA-219ENST00000518824 BIVMQ86UB2 503 aa11.45□□□□□ -0.58
VEGFA-219ENST00000518824 IL17RDQ8NFM7 739 aa11.45□□□□□ -0.58
VEGFA-219ENST00000518824 OR10H5Q8NGA6 315 aa11.45□□□□□ -0.58
VEGFA-219ENST00000518824 FANK1Q8TC84 345 aa11.45□□□□□ -0.58
VEGFA-219ENST00000518824 MRPL24Q96A35 216 aaKnown RBP11.45□□□□□ -0.58
VEGFA-219ENST00000518824 ASB9Q96DX5 294 aa11.45□□□□□ -0.58
VEGFA-219ENST00000518824 ERMAPQ96PL5 475 aaPredicted RBP11.45□□□□□ -0.58
VEGFA-219ENST00000518824 ZNF416Q9BWM5 594 aa11.45□□□□□ -0.58
VEGFA-219ENST00000518824 PLA2G12AQ9BZM1 189 aa11.45□□□□□ -0.58
VEGFA-219ENST00000518824 MUC13Q9H3R2 512 aa11.45□□□□□ -0.58
VEGFA-219ENST00000518824 FN3KQ9H479 309 aa11.45□□□□□ -0.58
VEGFA-219ENST00000518824 RERGLQ9H628 205 aa11.45□□□□□ -0.58
VEGFA-219ENST00000518824 POLE4Q9NR33 117 aa11.45□□□□□ -0.58
VEGFA-219ENST00000518824 COA3Q9Y2R0 106 aaPredicted RBP11.45□□□□□ -0.58
VEGFA-219ENST00000518824 PMF1-BGLAPU3KQ54 211 aa11.45□□□□□ -0.58
VEGFA-219ENST00000518824 U3KQV3 271 aa11.45□□□□□ -0.58
VEGFA-219ENST00000518824 SETD2Q9BYW2 2564 aaPredicted RBP11.45□□□□□ -0.58
VEGFA-219ENST00000518824 YLPM1P49750 1951 aaKnown RBP11.45□□□□□ -0.58
VEGFA-219ENST00000518824 ZFHX3Q15911 3703 aa11.44□□□□□ -0.58
VEGFA-219ENST00000518824 SLC16A7O60669 478 aa11.44□□□□□ -0.58
VEGFA-219ENST00000518824 TXNDC12O95881 172 aa11.44□□□□□ -0.58
VEGFA-219ENST00000518824 CLPTM1O96005 669 aa11.44□□□□□ -0.58
VEGFA-219ENST00000518824 HIST1H1CP16403 213 aaKnown RBP11.44□□□□□ -0.58
VEGFA-219ENST00000518824 GLRXP35754 106 aa11.44□□□□□ -0.58
VEGFA-219ENST00000518824 WNT5AP41221 380 aa11.44□□□□□ -0.58
VEGFA-219ENST00000518824 ALDH3B1P43353 468 aa11.44□□□□□ -0.58
VEGFA-219ENST00000518824 EFNA4P52798 201 aa11.44□□□□□ -0.58
VEGFA-219ENST00000518824 SNRPD2P62316 118 aaKnown RBP11.44□□□□□ -0.58
VEGFA-219ENST00000518824 HSF2Q03933 536 aa11.44□□□□□ -0.58
VEGFA-219ENST00000518824 TSPAN31Q12999 210 aa11.44□□□□□ -0.58
VEGFA-219ENST00000518824 MEP1BQ16820 701 aa11.44□□□□□ -0.58
VEGFA-219ENST00000518824 ALKBH6Q3KRA9 238 aa11.44□□□□□ -0.58
VEGFA-219ENST00000518824 MTX3Q5HYI7 312 aa11.44□□□□□ -0.58
VEGFA-219ENST00000518824 ZNF774Q6NX45 483 aa11.44□□□□□ -0.58
VEGFA-219ENST00000518824 ZNF620Q6ZNG0 422 aa11.44□□□□□ -0.58
VEGFA-219ENST00000518824 TMEM179BQ7Z7N9 219 aa11.44□□□□□ -0.58
VEGFA-219ENST00000518824 OR8D4Q8NGM9 314 aa11.44□□□□□ -0.58
VEGFA-219ENST00000518824 OR4K13Q8NH42 304 aa11.44□□□□□ -0.58
VEGFA-219ENST00000518824 GNPDA2Q8TDQ7 276 aa11.44□□□□□ -0.58
VEGFA-219ENST00000518824 CANT1Q8WVQ1 401 aa11.44□□□□□ -0.58
VEGFA-219ENST00000518824 POM121L2Q96KW2 1035 aa11.44□□□□□ -0.58
VEGFA-219ENST00000518824 OR2H1Q9GZK4 316 aa11.44□□□□□ -0.58
VEGFA-219ENST00000518824 NUAK2Q9H093 628 aa11.44□□□□□ -0.58
VEGFA-219ENST00000518824 TPK1Q9H3S4 243 aa11.44□□□□□ -0.58
VEGFA-219ENST00000518824 MAGIXQ9H6Y5 334 aa11.44□□□□□ -0.58
VEGFA-219ENST00000518824 CDH20Q9HBT6 801 aa11.44□□□□□ -0.58
VEGFA-219ENST00000518824 BARX1Q9HBU1 254 aaPredicted RBP11.44□□□□□ -0.58
VEGFA-219ENST00000518824 CCNB1IP1Q9NPC3 277 aa11.44□□□□□ -0.58
VEGFA-219ENST00000518824 VSX1Q9NZR4 365 aaPredicted RBP11.44□□□□□ -0.58
VEGFA-219ENST00000518824 TMCC3Q9ULS5 477 aa11.44□□□□□ -0.58
VEGFA-219ENST00000518824 CMAHPQ9Y471 501 aa11.44□□□□□ -0.58
VEGFA-219ENST00000518824 FN1P02751 2386 aaKnown RBP11.43□□□□□ -0.58
VEGFA-219ENST00000518824 XKRYO14609 159 aa11.43□□□□□ -0.58
VEGFA-219ENST00000518824 GYG2O15488 501 aa11.43□□□□□ -0.58
VEGFA-219ENST00000518824 F12P00748 615 aaPredicted RBP11.43□□□□□ -0.58
VEGFA-219ENST00000518824 TP53P04637 393 aaPredicted RBP11.43□□□□□ -0.58
VEGFA-219ENST00000518824 ADRA2AP08913 450 aa11.43□□□□□ -0.58
VEGFA-219ENST00000518824 CST2P09228 141 aa11.43□□□□□ -0.58
VEGFA-219ENST00000518824 HOXB4P17483 251 aaPredicted RBP11.43□□□□□ -0.58
VEGFA-219ENST00000518824 MSR1P21757 451 aa11.43□□□□□ -0.58
VEGFA-219ENST00000518824 CCNOP22674 350 aa11.43□□□□□ -0.58
VEGFA-219ENST00000518824 CLEC12AQ5QGZ9 265 aa11.43□□□□□ -0.58
VEGFA-219ENST00000518824 SLC35F1Q5T1Q4 408 aa11.43□□□□□ -0.58
VEGFA-219ENST00000518824 GPR139Q6DWJ6 353 aa11.43□□□□□ -0.58
VEGFA-219ENST00000518824 OR2T5Q6IEZ7 315 aa11.43□□□□□ -0.58
VEGFA-219ENST00000518824 ZNF101Q8IZC7 436 aa11.43□□□□□ -0.58
VEGFA-219ENST00000518824 AQP11Q8NBQ7 271 aa11.43□□□□□ -0.58
VEGFA-219ENST00000518824 OR2T29Q8NH02 315 aa11.43□□□□□ -0.58
VEGFA-219ENST00000518824 C10orf105Q8TEF2 133 aa11.43□□□□□ -0.58
VEGFA-219ENST00000518824 C11orf40Q8WZ69 217 aa11.43□□□□□ -0.58
VEGFA-219ENST00000518824 GTF3AQ92664 365 aaKnown RBP11.43□□□□□ -0.58
VEGFA-219ENST00000518824 NMNAT3Q96T66 252 aa11.43□□□□□ -0.58
VEGFA-219ENST00000518824 CADM1Q9BY67 442 aaKnown RBP11.43□□□□□ -0.58
VEGFA-219ENST00000518824 SLC7A8Q9UHI5 535 aa11.43□□□□□ -0.58
VEGFA-219ENST00000518824 NF1P21359 2839 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 TLN2Q9Y4G6 2542 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 IQCMA0A1B0GVH7 501 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 FAM171A2A8MVW0 826 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 LYNX1G3V0Z9 82 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 KRT36O76013 467 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 HEXAP06865 529 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 LYNX1P0DP58 116 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 NR2C1P13056 603 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 STOMP27105 288 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 SLC6A6P31641 620 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 PPOXP50336 477 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 RPS6KA3P51812 740 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 UCP2P55851 309 aa11.42□□□□□ -0.58
VEGFA-219ENST00000518824 GALK2Q01415 458 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms