RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 FABP3P05413 133 aa1.8□□□□□ -2.12
SKP1-203ENST00000517625 ZNF24P17028 368 aa1.8□□□□□ -2.12
SKP1-203ENST00000517625 PGAM1P18669 254 aa1.8□□□□□ -2.12
SKP1-203ENST00000517625 PRMT2P55345 433 aa1.8□□□□□ -2.12
SKP1-203ENST00000517625 RAB10P61026 200 aa1.8□□□□□ -2.12
SKP1-203ENST00000517625 ACTA2P62736 377 aa1.8□□□□□ -2.12
SKP1-203ENST00000517625 ACTC1P68032 377 aa1.8□□□□□ -2.12
SKP1-203ENST00000517625 SLAQ13239 276 aa1.8□□□□□ -2.12
SKP1-203ENST00000517625 ARMC12Q5T9G4 340 aa1.8□□□□□ -2.12
SKP1-203ENST00000517625 LCE3AQ5TA76 89 aa1.8□□□□□ -2.12
SKP1-203ENST00000517625 C9orf135Q5VTT2 229 aa1.8□□□□□ -2.12
SKP1-203ENST00000517625 ANKRD26P1Q6NSI1 321 aa1.8□□□□□ -2.12
SKP1-203ENST00000517625 METAP1DQ6UB28 335 aaPredicted RBP1.8□□□□□ -2.12
SKP1-203ENST00000517625 SASS6Q6UVJ0 657 aa1.8□□□□□ -2.12
SKP1-203ENST00000517625 Q6ZSR3 168 aa1.8□□□□□ -2.12
SKP1-203ENST00000517625 FAM43BQ6ZT52 329 aaPredicted RBP1.8□□□□□ -2.12
SKP1-203ENST00000517625 IQCKQ8N0W5 287 aa1.8□□□□□ -2.12
SKP1-203ENST00000517625 PGAM4Q8N0Y7 254 aa1.8□□□□□ -2.12
SKP1-203ENST00000517625 OR2A1Q8NGT9 310 aa1.8□□□□□ -2.12
SKP1-203ENST00000517625 OR10J6PQ8NGY7 276 aa1.8□□□□□ -2.12
SKP1-203ENST00000517625 N4BP2L2Q92802 583 aaPredicted RBP1.8□□□□□ -2.12
SKP1-203ENST00000517625 NTAN1Q96AB6 310 aa1.8□□□□□ -2.12
SKP1-203ENST00000517625 PKNOX2Q96KN3 472 aa1.8□□□□□ -2.12
SKP1-203ENST00000517625 ATP5SQ99766 215 aa1.8□□□□□ -2.12
SKP1-203ENST00000517625 CENPKQ9BS16 269 aa1.8□□□□□ -2.12
SKP1-203ENST00000517625 PLA2G2FQ9BZM2 168 aa1.8□□□□□ -2.12
SKP1-203ENST00000517625 GPATCH2LQ9NWQ4 482 aa1.8□□□□□ -2.12
SKP1-203ENST00000517625 ZNRD1Q9P1U0 126 aa1.8□□□□□ -2.12
SKP1-203ENST00000517625 UVRAGQ9P2Y5 699 aa1.8□□□□□ -2.12
SKP1-203ENST00000517625 UXTQ9UBK9 157 aaPredicted RBP1.8□□□□□ -2.12
SKP1-203ENST00000517625 PSG8Q9UQ74 426 aa1.8□□□□□ -2.12
SKP1-203ENST00000517625 YTHDF2Q9Y5A9 579 aaKnown RBP1.8□□□□□ -2.12
SKP1-203ENST00000517625 CNTNAP1P78357 1384 aa1.8□□□□□ -2.12
SKP1-203ENST00000517625 A0A1W2PP18 115 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 CIB4A0PJX0 185 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 F6UB75 175 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 SIRPB1O00241 398 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 AIM2O14862 343 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 RAB29O14966 203 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 PPP1R2P9O14990 202 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 KLHL41O60662 606 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 GABARAPO95166 117 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 VAMP5O95183 116 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 AGTP01019 485 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 MRPL3P09001 348 aaKnown RBP1.79□□□□□ -2.12
SKP1-203ENST00000517625 GNAO1P09471 354 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 TLX1NBP0CAT3 122 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 CT45A6P0DMU7 189 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 CT45A5P0DMU8 189 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 CT45A7P0DMV0 189 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 HNRNPH3P31942 346 aaKnown RBP1.79□□□□□ -2.12
SKP1-203ENST00000517625 CDKN2BP42772 138 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 SLC1A1P43005 524 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 CSNK1A1P48729 337 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 TMED10P49755 219 aaKnown RBP1.79□□□□□ -2.12
SKP1-203ENST00000517625 CDH6P55285 790 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 ESRRGP62508 458 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 RAP1AP62834 184 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 ACTG2P63267 376 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 MXD1Q05195 221 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 CT45A1Q5HYN5 189 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 LY6G6FQ5SQ64 297 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 UBE2UQ5VVX9 321 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 Q5W150 140 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 SLC8B1Q6J4K2 584 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 ZYG11AQ6WRX3 759 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 ZNF836Q6ZNA1 936 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 Q6ZR03 302 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 NIPA1Q7RTP0 329 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 TMEM150AQ86TG1 271 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 PRSS58Q8IYP2 241 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 HSD17B11Q8NBQ5 300 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 CT45A3Q8NHU0 189 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 ELMO1Q92556 727 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 MRGPRFQ96AM1 343 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 TM4SF18Q96CE8 201 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 PDXPQ96GD0 296 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 DNAJC1Q96KC8 554 aaKnown RBP1.79□□□□□ -2.12
SKP1-203ENST00000517625 ZNF681Q96N22 645 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 TGS1Q96RS0 853 aaKnown RBP1.79□□□□□ -2.12
SKP1-203ENST00000517625 SAV1Q9H4B6 383 aaPredicted RBP1.79□□□□□ -2.12
SKP1-203ENST00000517625 SYNDIG1Q9H7V2 258 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 UBE2ZQ9H832 354 aaPredicted RBP1.79□□□□□ -2.12
SKP1-203ENST00000517625 ZNF430Q9H8G1 570 aaPredicted RBP1.79□□□□□ -2.12
SKP1-203ENST00000517625 FGF20Q9NP95 211 aaPredicted RBP1.79□□□□□ -2.12
SKP1-203ENST00000517625 SAMSN1Q9NSI8 373 aaKnown RBP1.79□□□□□ -2.12
SKP1-203ENST00000517625 CTSFQ9UBX1 484 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 OPN4Q9UHM6 478 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 LGALS13Q9UHV8 139 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 ARHGAP21Q5T5U3 1957 aa1.79□□□□□ -2.12
SKP1-203ENST00000517625 SLIT3O75094 1523 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 TRAV6A0A075B6T7 132 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 TRBV9A0A0B4J1U6 114 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 ZNF816-ZNF321PA0A0X1KG74 233 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 TMEM223A0PJW6 202 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 TMEM150BA6NC51 233 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 ZNF705GA8MUZ8 300 aaPredicted RBP1.78□□□□□ -2.12
SKP1-203ENST00000517625 TCP11X1B4DZS4 312 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 SPECC1L-ADORA2AF8WAN1 911 aa1.78□□□□□ -2.12
SKP1-203ENST00000517625 AP3B1O00203 1094 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms