RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 PEBP1P30086 187 aaKnown RBP-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 EIF1P41567 113 aaKnown RBP-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 PRKXP51817 358 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 OR12D2P58182 307 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 SETQ01105 290 aaPredicted RBP-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 AKAP17AQ02040 695 aaKnown RBP-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 BTN1A1Q13410 526 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 ZNF266Q14584 549 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 SLC15A2Q16348 729 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 PARP15Q460N3 678 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 ATL3Q6DD88 541 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 NEK5Q6P3R8 708 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 RBPMS2Q6ZRY4 209 aaKnown RBP-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 UNC45BQ8IWX7 931 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 BBS7Q8IWZ6 715 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 EID2Q8N6I1 236 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 OR52N1Q8NH53 320 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 M1APQ8TC57 530 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 TMEM37Q8WXS4 190 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 MBOAT7Q96N66 472 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 DEFB118Q96PH6 123 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 GCNAQ96QF7 691 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 AMELYQ99218 206 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 GPR22Q99680 433 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 RANBP3Q9H6Z4 567 aaPredicted RBP-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 TMCC3Q9ULS5 477 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 PACSIN2Q9UNF0 486 aaPredicted RBP-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 SNX7Q9UNH6 387 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 STK38LQ9Y2H1 464 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 ATP6V0A2Q9Y487 856 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 CNOT1A5YKK6 2376 aaKnown RBP-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 RNF213Q63HN8 5207 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 NIPBLQ6KC79 2804 aaeCLIP-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 RALGAPA2Q2PPJ7 1873 aa-2.09□□□□□ -2.74
RNU6-542P-201ENST00000516405 OR6C65A6NJZ3 312 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 F5H5T6 163 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 SCGB1D1O95968 90 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 NRASP01111 189 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 HRASP01112 189 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 KRASP01116 189 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 RPN2P04844 631 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 KRT8P05787 483 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 KLK3P07288 261 aaPredicted RBP-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 ABCB1P08183 1280 aaPredicted RBP-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 PAX6P26367 422 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 LEPP41159 167 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 EVX1P49640 407 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 SERPINB8P50452 374 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 RAB28P51157 221 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 CCR8P51685 355 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 RPS14P62263 151 aaKnown RBP-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 MRPS6P82932 125 aaKnown RBP-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 ALCAMQ13740 583 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 ZRSR2Q15696 482 aaKnown RBP-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 CRY2Q49AN0 593 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 PYCR3Q53H96 274 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 ELP2Q6IA86 826 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 MZT2BQ6NZ67 158 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 Q6ZPB1 254 aaPredicted RBP-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 HDDC2Q7Z4H3 204 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 ASPGQ86U10 573 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 ZNF546Q86UE3 836 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 RPRMLQ8N4K4 120 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 SYT2Q8N9I0 419 aaPredicted RBP-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 MLKLQ8NB16 471 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 ZFP62Q8NB50 900 aaPredicted RBP-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 NEK11Q8NG66 645 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 OR4K14Q8NGD5 310 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 LKAAEAR1Q8TD35 194 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 SCFD1Q8WVM8 642 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 RPL3LQ92901 407 aaKnown RBP-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 ALG12Q9BV10 488 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 COMMD4Q9H0A8 199 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 INIPQ9NRY2 104 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 RHBDL2Q9NX52 303 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 CALYQ9NYX4 217 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 ORC3Q9UBD5 711 aaPredicted RBP-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 NOL12Q9UGY1 213 aaKnown RBP eCLIP-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 SH3BGRL2Q9UJC5 107 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 LRRC42Q9Y546 428 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 SCN9AQ15858 1988 aa-2.1□□□□□ -2.75
RNU6-542P-201ENST00000516405 MAPK8IP3Q9UPT6 1336 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 TNRC18O15417 2968 aaPredicted RBP-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 hCG_1809904A0A1W2PP81 198 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 A0A1W2PPE2 198 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 A0A1W2PR64 198 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 C5orf52A6NGY3 159 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 GPR89AB7ZAQ6 455 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 TRAPPC3O43617 180 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 PSMD10O75832 226 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 SIX3O95343 332 aaPredicted RBP-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 PAHP00439 452 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 GPR89BP0CG08 455 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 PDHBP11177 359 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 CYP2B6P20813 491 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 TMOD1P28289 359 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 STIP1P31948 543 aaKnown RBP-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 RFC4P35249 363 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 DPYSL2Q16555 572 aa-2.11□□□□□ -2.75
RNU6-542P-201ENST00000516405 FILIP1LQ4L180 1135 aa-2.11□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms