RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 ANPEPP15144 967 aa10.37□□□□□ -0.75
SNHG4-208ENST00000514110 EPHA1P21709 976 aa10.37□□□□□ -0.75
SNHG4-208ENST00000514110 CFPP27918 469 aa10.37□□□□□ -0.75
SNHG4-208ENST00000514110 LAP3P28838 519 aa10.37□□□□□ -0.75
SNHG4-208ENST00000514110 GCH1P30793 250 aa10.37□□□□□ -0.75
SNHG4-208ENST00000514110 MMP15P51511 669 aa10.37□□□□□ -0.75
SNHG4-208ENST00000514110 SF3A3Q12874 501 aaKnown RBP eCLIP10.37□□□□□ -0.752e-8■■□□□ 13.7
SNHG4-208ENST00000514110 KLF10Q13118 480 aa10.37□□□□□ -0.75
SNHG4-208ENST00000514110 HNRNPA0Q13151 305 aaKnown RBP10.37□□□□□ -0.75
SNHG4-208ENST00000514110 HFEQ30201 348 aa10.37□□□□□ -0.75
SNHG4-208ENST00000514110 ZNF718Q3SXZ3 478 aa10.37□□□□□ -0.75
SNHG4-208ENST00000514110 LRRC23Q53EV4 343 aaPredicted RBP10.37□□□□□ -0.75
SNHG4-208ENST00000514110 CYBRD1Q53TN4 286 aa10.37□□□□□ -0.75
SNHG4-208ENST00000514110 SPRNQ5BIV9 151 aa10.37□□□□□ -0.75
SNHG4-208ENST00000514110 ALG10Q5BKT4 473 aa10.37□□□□□ -0.75
SNHG4-208ENST00000514110 FAM27BQ5VT28 67 aa10.37□□□□□ -0.75
SNHG4-208ENST00000514110 ERICH5Q6P6B1 374 aa10.37□□□□□ -0.75
SNHG4-208ENST00000514110 C12orf54Q6X4T0 127 aa10.37□□□□□ -0.75
SNHG4-208ENST00000514110 IGFN1Q86VF2 1251 aa10.37□□□□□ -0.75
SNHG4-208ENST00000514110 SLC25A40Q8TBP6 338 aa10.37□□□□□ -0.75
SNHG4-208ENST00000514110 KLF14Q8TD94 323 aaPredicted RBP10.37□□□□□ -0.75
SNHG4-208ENST00000514110 ZFAND2BQ8WV99 257 aa10.37□□□□□ -0.75
SNHG4-208ENST00000514110 ALG12Q9BV10 488 aa10.37□□□□□ -0.75
SNHG4-208ENST00000514110 TMPRSS13Q9BYE2 586 aa10.37□□□□□ -0.75
SNHG4-208ENST00000514110 OR2H1Q9GZK4 316 aa10.37□□□□□ -0.75
SNHG4-208ENST00000514110 OR2J1Q9GZK6 312 aa10.37□□□□□ -0.75
SNHG4-208ENST00000514110 WNT5BQ9H1J7 359 aa10.37□□□□□ -0.75
SNHG4-208ENST00000514110 EIF3KQ9UBQ5 218 aaKnown RBP10.37□□□□□ -0.75
SNHG4-208ENST00000514110 A4GNTQ9UNA3 340 aa10.37□□□□□ -0.75
SNHG4-208ENST00000514110 HIF3AQ9Y2N7 669 aa10.37□□□□□ -0.75
SNHG4-208ENST00000514110 NGFP01138 241 aa10.36□□□□□ -0.75
SNHG4-208ENST00000514110 NPPAP01160 153 aa10.36□□□□□ -0.75
SNHG4-208ENST00000514110 IFNA14P01570 189 aa10.36□□□□□ -0.75
SNHG4-208ENST00000514110 IGHMP01871 453 aa10.36□□□□□ -0.75
SNHG4-208ENST00000514110 CST2P09228 141 aa10.36□□□□□ -0.75
SNHG4-208ENST00000514110 IFI30P13284 250 aa10.36□□□□□ -0.75
SNHG4-208ENST00000514110 ADRA2CP18825 462 aa10.36□□□□□ -0.75
SNHG4-208ENST00000514110 KDELR2P33947 212 aa10.36□□□□□ -0.75
SNHG4-208ENST00000514110 RBMXP38159 391 aaKnown RBP10.36□□□□□ -0.75
SNHG4-208ENST00000514110 GDI2P50395 445 aaKnown RBP10.36□□□□□ -0.75
SNHG4-208ENST00000514110 RPL27P61353 136 aaKnown RBP10.36□□□□□ -0.75
SNHG4-208ENST00000514110 PPP1CBP62140 327 aa10.36□□□□□ -0.75
SNHG4-208ENST00000514110 SCGB2A2Q13296 93 aa10.36□□□□□ -0.75
SNHG4-208ENST00000514110 FHL1Q13642 323 aa10.36□□□□□ -0.75
SNHG4-208ENST00000514110 TAF11Q15544 211 aa10.36□□□□□ -0.75
SNHG4-208ENST00000514110 COQ5Q5HYK3 327 aa10.36□□□□□ -0.75
SNHG4-208ENST00000514110 FAM209AQ5JX71 171 aa10.36□□□□□ -0.75
SNHG4-208ENST00000514110 MBNL2Q5VZF2 373 aaKnown RBP10.36□□□□□ -0.75
SNHG4-208ENST00000514110 RFPL4BQ6ZWI9 263 aa10.36□□□□□ -0.75
SNHG4-208ENST00000514110 ZNF771Q7L3S4 317 aaPredicted RBP10.36□□□□□ -0.75
SNHG4-208ENST00000514110 HDXQ7Z353 690 aa10.36□□□□□ -0.75
SNHG4-208ENST00000514110 MICU2Q8IYU8 434 aa10.36□□□□□ -0.75
SNHG4-208ENST00000514110 LRRC75AQ8NAA5 344 aa10.36□□□□□ -0.75
SNHG4-208ENST00000514110 ABHD4Q8TB40 342 aa10.36□□□□□ -0.75
SNHG4-208ENST00000514110 ZNF418Q8TF45 676 aaPredicted RBP10.36□□□□□ -0.75
SNHG4-208ENST00000514110 CCL17Q92583 94 aa10.36□□□□□ -0.75
SNHG4-208ENST00000514110 RAB1CQ92928 201 aa10.36□□□□□ -0.75
SNHG4-208ENST00000514110 RAB39BQ96DA2 213 aa10.36□□□□□ -0.75
SNHG4-208ENST00000514110 BPIFA2Q96DR5 249 aa10.36□□□□□ -0.75
SNHG4-208ENST00000514110 ELMOD3Q96FG2 381 aa10.36□□□□□ -0.75
SNHG4-208ENST00000514110 TPD52L3Q96J77 140 aa10.36□□□□□ -0.75
SNHG4-208ENST00000514110 PCDHB10Q9UN67 800 aa10.36□□□□□ -0.75
SNHG4-208ENST00000514110 TRAV27A0A087WT01 109 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 A0A0G2JMP0 313 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 A0A0X1KG70 313 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 LOC100653049A0A140TA62 436 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 A0A1W2PPL8 197 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 BBIP1A8MTZ0 92 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 FAM220BPB1ANY3 271 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 J3KTA2 159 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 KRT34O76011 436 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 UBOX5O94941 541 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 SCG5P05408 212 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 NR2C1P13056 603 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 YAP1P46937 504 aaKnown RBP10.35□□□□□ -0.75
SNHG4-208ENST00000514110 HILS1P60008 231 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 CTXN1P60606 82 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 SELENOWP63302 87 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 ST3GAL3Q11203 375 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 CGB2Q6NT52 195 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 ZNF774Q6NX45 483 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 FOXL2NBQ6ZUU3 175 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 USP43Q70EL4 1123 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 C1QL2Q7Z5L3 287 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 PEG10Q86TG7 708 aaKnown RBP10.35□□□□□ -0.75
SNHG4-208ENST00000514110 OR4M2Q8NGB6 313 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 OR51A7Q8NH64 312 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 TIMD4Q96H15 378 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 PRRC1Q96M27 445 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 RBP7Q96R05 134 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 PLA2G12AQ9BZM1 189 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 VIPAS39Q9H9C1 493 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 SAR1AQ9NR31 198 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 MAN2C1Q9NTJ4 1040 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 GMPR2Q9P2T1 348 aaKnown RBP10.35□□□□□ -0.75
SNHG4-208ENST00000514110 RHCGQ9UBD6 479 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 KLHL21Q9UJP4 597 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 SNX13Q9Y5W8 968 aa10.35□□□□□ -0.75
SNHG4-208ENST00000514110 PLSCR5A0PG75 271 aa10.34□□□□□ -0.75
SNHG4-208ENST00000514110 GMNCA6NCL1 334 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms