RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 RCAN2Q14206 197 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 INAQ16352 499 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 PTPN20Q4JDL3 420 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 SFT2D3Q587I9 215 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 ANKRD22Q5VYY1 191 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 AP1ARQ63HQ0 302 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 OR4F3Q6IEY1 312 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 OR2A2Q6IF42 318 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 UQCC3Q6UW78 93 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 ENPP6Q6UWR7 440 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 PRSS58Q8IYP2 241 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 ANKFN1Q8N957 763 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 MFSD9Q8NBP5 474 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 APCDD1LQ8NCL9 501 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 OR9A2Q8NGT5 310 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 OR10J6PQ8NGY7 276 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 OR2G2Q8NGZ5 317 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 KLF14Q8TD94 323 aaPredicted RBP0.64□□□□□ -2.31
PDGFC-208ENST00000512711 WDR34Q96EX3 536 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 MTMR9Q96QG7 549 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 P2RX4Q99571 388 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 TIMM17AQ99595 171 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 TBL1YQ9BQ87 522 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 FRMD8P1Q9BZ68 369 aaPredicted RBP0.64□□□□□ -2.31
PDGFC-208ENST00000512711 C1orf21Q9H246 121 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 RWDD1Q9H446 243 aaPredicted RBP0.64□□□□□ -2.31
PDGFC-208ENST00000512711 POLE4Q9NR33 117 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 PIPOXQ9P0Z9 390 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 CGNQ9P2M7 1197 aaKnown RBP0.64□□□□□ -2.31
PDGFC-208ENST00000512711 UVRAGQ9P2Y5 699 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 EPS15L1Q9UBC2 864 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 ZNF639Q9UID6 485 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 CBY1Q9Y3M2 126 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 U3KQV3 271 aa0.64□□□□□ -2.31
PDGFC-208ENST00000512711 FAM47DPA6NHR8 397 aa0.63□□□□□ -2.31
PDGFC-208ENST00000512711 CCL21O00585 134 aa0.63□□□□□ -2.31
PDGFC-208ENST00000512711 HRES1P13985 223 aa0.63□□□□□ -2.31
PDGFC-208ENST00000512711 STMN1P16949 149 aa0.63□□□□□ -2.31
PDGFC-208ENST00000512711 IL1RNP18510 177 aa0.63□□□□□ -2.31
PDGFC-208ENST00000512711 KRTAP12-1P59990 96 aa0.63□□□□□ -2.31
PDGFC-208ENST00000512711 ADARB1P78563 741 aaKnown RBP0.63□□□□□ -2.31
PDGFC-208ENST00000512711 TCP10Q12799 353 aa0.63□□□□□ -2.31
PDGFC-208ENST00000512711 CDH17Q12864 832 aa0.63□□□□□ -2.31
PDGFC-208ENST00000512711 MESDQ14696 234 aa0.63□□□□□ -2.31
PDGFC-208ENST00000512711 ORMDL2Q53FV1 153 aa0.63□□□□□ -2.31
PDGFC-208ENST00000512711 RNASE13Q5GAN3 156 aaKnown RBP0.63□□□□□ -2.31
PDGFC-208ENST00000512711 TTC23Q5W5X9 447 aa0.63□□□□□ -2.31
PDGFC-208ENST00000512711 OAFQ86UD1 273 aa0.63□□□□□ -2.31
PDGFC-208ENST00000512711 ZNF683Q8IZ20 524 aa0.63□□□□□ -2.31
PDGFC-208ENST00000512711 TMEM256Q8N2U0 113 aa0.63□□□□□ -2.31
PDGFC-208ENST00000512711 Q8NDZ9 215 aa0.63□□□□□ -2.31
PDGFC-208ENST00000512711 DNAJC1Q96KC8 554 aaKnown RBP0.63□□□□□ -2.31
PDGFC-208ENST00000512711 IP6K3Q96PC2 410 aa0.63□□□□□ -2.31
PDGFC-208ENST00000512711 ZNF317Q96PQ6 595 aaPredicted RBP0.63□□□□□ -2.31
PDGFC-208ENST00000512711 RHOXF2Q9BQY4 288 aa0.63□□□□□ -2.31
PDGFC-208ENST00000512711 PPA2Q9H2U2 334 aa0.63□□□□□ -2.31
PDGFC-208ENST00000512711 DBNDD1Q9H9R9 158 aa0.63□□□□□ -2.31
PDGFC-208ENST00000512711 UFSP2Q9NUQ7 469 aa0.63□□□□□ -2.31
PDGFC-208ENST00000512711 SMOXQ9NWM0 555 aa0.63□□□□□ -2.31
PDGFC-208ENST00000512711 AURKCQ9UQB9 309 aa0.63□□□□□ -2.31
PDGFC-208ENST00000512711 ATP8B3O60423 1300 aa0.63□□□□□ -2.31
PDGFC-208ENST00000512711 A0A0B4J2A0 478 aa0.62□□□□□ -2.31
PDGFC-208ENST00000512711 IGHV1OR15-9A0A0B4J2B8 117 aa0.62□□□□□ -2.31
PDGFC-208ENST00000512711 CENPVL3A0A0U1RRI6 287 aa0.62□□□□□ -2.31
PDGFC-208ENST00000512711 ARPC3O15145 178 aa0.62□□□□□ -2.31
PDGFC-208ENST00000512711 CNMDO75829 334 aa0.62□□□□□ -2.31
PDGFC-208ENST00000512711 C1orf105O95561 183 aa0.62□□□□□ -2.31
PDGFC-208ENST00000512711 AIFM1O95831 613 aa0.62□□□□□ -2.31
PDGFC-208ENST00000512711 SYKP43405 635 aa0.62□□□□□ -2.31
PDGFC-208ENST00000512711 CCNG1P51959 295 aa0.62□□□□□ -2.31
PDGFC-208ENST00000512711 UGT2B15P54855 530 aa0.62□□□□□ -2.31
PDGFC-208ENST00000512711 TAS2R31P59538 309 aa0.62□□□□□ -2.31
PDGFC-208ENST00000512711 IHHQ14623 411 aa0.62□□□□□ -2.31
PDGFC-208ENST00000512711 KLHL38Q2WGJ6 581 aa0.62□□□□□ -2.31
PDGFC-208ENST00000512711 PDZK1Q5T2W1 519 aa0.62□□□□□ -2.31
PDGFC-208ENST00000512711 FAM222AQ5U5X8 452 aa0.62□□□□□ -2.31
PDGFC-208ENST00000512711 CASP12Q6UXS9 341 aa0.62□□□□□ -2.31
PDGFC-208ENST00000512711 SLC35G3Q8N808 338 aa0.62□□□□□ -2.31
PDGFC-208ENST00000512711 HSFY1Q96LI6 401 aa0.62□□□□□ -2.31
PDGFC-208ENST00000512711 MFFQ9GZY8 342 aa0.62□□□□□ -2.31
PDGFC-208ENST00000512711 PARP12Q9H0J9 701 aaKnown RBP0.62□□□□□ -2.31
PDGFC-208ENST00000512711 ACTR3BQ9P1U1 418 aa0.62□□□□□ -2.31
PDGFC-208ENST00000512711 SHPKQ9UHJ6 478 aa0.62□□□□□ -2.31
PDGFC-208ENST00000512711 ENOPH1Q9UHY7 261 aa0.62□□□□□ -2.31
PDGFC-208ENST00000512711 HOOK1Q9UJC3 728 aaKnown RBP0.62□□□□□ -2.31
PDGFC-208ENST00000512711 ST3GAL6Q9Y274 331 aa0.62□□□□□ -2.31
PDGFC-208ENST00000512711 VWDEQ8N2E2 1590 aa0.62□□□□□ -2.31
PDGFC-208ENST00000512711 GPR89AB7ZAQ6 455 aa0.61□□□□□ -2.31
PDGFC-208ENST00000512711 F6UB75 175 aa0.61□□□□□ -2.31
PDGFC-208ENST00000512711 REM1O75628 298 aa0.61□□□□□ -2.31
PDGFC-208ENST00000512711 BAG2O95816 211 aa0.61□□□□□ -2.31
PDGFC-208ENST00000512711 PRB1P04280 392 aa0.61□□□□□ -2.31
PDGFC-208ENST00000512711 ZNF688P0C7X2 276 aa0.61□□□□□ -2.31
PDGFC-208ENST00000512711 GPR89BP0CG08 455 aa0.61□□□□□ -2.31
PDGFC-208ENST00000512711 HSMCR30P0CW71 290 aa0.61□□□□□ -2.31
PDGFC-208ENST00000512711 ME2P23368 584 aa0.61□□□□□ -2.31
PDGFC-208ENST00000512711 MAPK3P27361 379 aaPredicted RBP0.61□□□□□ -2.31
PDGFC-208ENST00000512711 MDH1P40925 334 aaKnown RBP0.61□□□□□ -2.31
PDGFC-208ENST00000512711 ATP1B3P54709 279 aa0.61□□□□□ -2.31
PDGFC-208ENST00000512711 CBX1P83916 185 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms