RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	LRRK2	Q5S007	2527 aa		12.7	□□□□□ -0.38
MATR3-238	ENST00000512107	IFNG	P01579	166 aa		12.69	□□□□□ -0.38
MATR3-238	ENST00000512107	ADRA2A	P08913	450 aa		12.69	□□□□□ -0.38
MATR3-238	ENST00000512107	ZNF3	P17036	446 aa		12.69	□□□□□ -0.38
MATR3-238	ENST00000512107	CENPA	P49450	140 aa		12.69	□□□□□ -0.38
MATR3-238	ENST00000512107	HCCS	P53701	268 aa		12.69	□□□□□ -0.38
MATR3-238	ENST00000512107	SMN1	Q16637	294 aa	Known RBP	12.69	□□□□□ -0.38
MATR3-238	ENST00000512107	ZNF691	Q5VV52	312 aa		12.69	□□□□□ -0.38
MATR3-238	ENST00000512107	SP5	Q6BEB4	398 aa	Predicted RBP	12.69	□□□□□ -0.38
MATR3-238	ENST00000512107	ALKBH2	Q6NS38	261 aa		12.69	□□□□□ -0.38
MATR3-238	ENST00000512107	IZUMO2	Q6UXV1	221 aa		12.69	□□□□□ -0.38
MATR3-238	ENST00000512107	MEX3B	Q6ZN04	569 aa	Known RBP	12.69	□□□□□ -0.38
MATR3-238	ENST00000512107	USP51	Q70EK9	711 aa		12.69	□□□□□ -0.38
MATR3-238	ENST00000512107	MDP1	Q86V88	176 aa		12.69	□□□□□ -0.38
MATR3-238	ENST00000512107	C1orf162	Q8NEQ5	155 aa	Predicted RBP	12.69	□□□□□ -0.38
MATR3-238	ENST00000512107	CYGB	Q8WWM9	190 aa		12.69	□□□□□ -0.38
MATR3-238	ENST00000512107	TFAP2C	Q92754	450 aa		12.69	□□□□□ -0.38
MATR3-238	ENST00000512107	ZMYND19	Q96E35	227 aa	Predicted RBP	12.69	□□□□□ -0.38
MATR3-238	ENST00000512107	ZNF582	Q96NG8	517 aa	Predicted RBP	12.69	□□□□□ -0.38
MATR3-238	ENST00000512107	RASSF1	Q9NS23	344 aa		12.69	□□□□□ -0.38
MATR3-238	ENST00000512107	ORC6	Q9Y5N6	252 aa		12.69	□□□□□ -0.38
MATR3-238	ENST00000512107	USP9Y	O00507	2555 aa	Predicted RBP	12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	ABCA12	Q86UK0	2595 aa		12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	ARPC4-TTLL3	A0A0A6YYG9	625 aa		12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	PRR23D1	E9PI22	279 aa	Predicted RBP	12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	SELENOF	O60613	162 aa		12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	ENTPD6	O75354	484 aa		12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	WBP4	O75554	376 aa	Known RBP	12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	PRR23D2	P0DMB1	279 aa	Predicted RBP	12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	ANOS1	P23352	680 aa		12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	GSTT1	P30711	240 aa		12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	CAPG	P40121	348 aa		12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	ZNF84	P51523	738 aa		12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	SORD	Q00796	357 aa		12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	TEK	Q02763	1124 aa		12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	APOF	Q13790	326 aa		12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	KCNMB1	Q16558	191 aa		12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	TIMM23B	Q5SRD1	257 aa		12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	CORO6	Q6QEF8	472 aa		12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	WFDC8	Q8IUA0	241 aa		12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	ZNF584	Q8IVC4	421 aa		12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	GLB1L2	Q8IW92	636 aa		12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	DHRSX	Q8N5I4	330 aa		12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	PROKR2	Q8NFJ6	384 aa		12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	STEAP2	Q8NFT2	490 aa		12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	RHOXF1	Q8NHV9	184 aa		12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	RDH12	Q96NR8	316 aa		12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	SLC38A2	Q96QD8	506 aa		12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	AMELY	Q99218	206 aa		12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	HDHD5	Q9BXW7	423 aa		12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	WNT5B	Q9H1J7	359 aa		12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	SIAE	Q9HAT2	523 aa		12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	KLHDC2	Q9Y2U9	406 aa		12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	LHFPL6	Q9Y693	200 aa		12.68	□□□□□ -0.38
MATR3-238	ENST00000512107	CREBBP	Q92793	2442 aa		12.68	□□□□□ -0.38
MATR3-238	ENST00000512107		A0A1W2PPR1	153 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	DPRX	A6NFQ7	191 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	DEFB108A	A8MXU0	73 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	PRR32	B1ATL7	298 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	GLCE	O94923	617 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	APOL3	O95236	402 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	ZNF32	P17041	273 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	CRABP1	P29762	137 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	SH3BGR	P55822	239 aa	Predicted RBP	12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	ISL1	P61371	349 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	SNRPG	P62308	76 aa	Known RBP	12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	HSF2	Q03933	536 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	SPOCK1	Q08629	439 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	KEAP1	Q14145	624 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	MAD2L1BP	Q15013	274 aa	Predicted RBP	12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	KLHL12	Q53G59	568 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	FAM27B	Q5VT28	67 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	LINC00346	Q8IVM7	164 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	TIGD4	Q8IY51	512 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	ZNF295-AS1	Q8N0V1	137 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	RFLNB	Q8N5W9	214 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	CPEB3	Q8NE35	698 aa	Known RBP	12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	OR10S1	Q8NGN2	331 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	OR2T4	Q8NH00	348 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	AKR7L	Q8NHP1	331 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	CNIH3	Q8TBE1	160 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	FNDC8	Q8TC99	324 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	MS4A3	Q96HJ5	214 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	PLEKHA8	Q96JA3	519 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	HS3ST6	Q96QI5	342 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	TEAD3	Q99594	435 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	RHNO1	Q9BSD3	238 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	OR10A4	Q9H209	315 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	MARCH7	Q9H992	704 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	C8orf4	Q9NR00	106 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	COMMD3-BMI1	R4GMX3	469 aa		12.67	□□□□□ -0.38
MATR3-238	ENST00000512107	IGHV1-18	A0A0C4DH31	117 aa		12.66	□□□□□ -0.38
MATR3-238	ENST00000512107	PLAU	P00749	431 aa		12.66	□□□□□ -0.38
MATR3-238	ENST00000512107	MRPL3	P09001	348 aa	Known RBP	12.66	□□□□□ -0.38
MATR3-238	ENST00000512107	OR8G3P	P0DMU2	310 aa		12.66	□□□□□ -0.38
MATR3-238	ENST00000512107	CD79A	P11912	226 aa		12.66	□□□□□ -0.38
MATR3-238	ENST00000512107	MSR1	P21757	451 aa		12.66	□□□□□ -0.38
MATR3-238	ENST00000512107	VHL	P40337	213 aa		12.66	□□□□□ -0.38
MATR3-238	ENST00000512107	ZNF83	P51522	516 aa		12.66	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms