RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-208	ENST00000511895	TRBV6-6	A0A0A6YYG2	114 aa		3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	IGKV6-21	A0A0C4DH24	114 aa		3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	GJE1	A6NN92	205 aa		3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	PRKY	O43930	277 aa		3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	OR4Q2	P0C623	313 aa		3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	HMGA1	P17096	107 aa	Known RBP	3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	PGC	P20142	388 aa		3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	TBXA2R	P21731	343 aa		3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	ANXA13	P27216	316 aa		3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	TUFM	P49411	452 aa	Known RBP	3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	PRKX	P51817	358 aa		3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	SYCP1	Q15431	976 aa		3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	CHRNA6	Q15825	494 aa		3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	TMEM41B	Q5BJD5	291 aa		3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	C1orf146	Q5VVC0	180 aa		3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	C12orf54	Q6X4T0	127 aa		3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	SYT10	Q6XYQ8	523 aa		3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	ACOT7L	Q6ZUV0	252 aa		3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	ACOT1	Q86TX2	421 aa		3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	KIR3DL3	Q8N743	410 aa		3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	OR5L2	Q8NGL0	311 aa		3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	SRSF12	Q8WXF0	261 aa	Known RBP	3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	RAB7B	Q96AH8	199 aa		3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	RPUSD4	Q96CM3	377 aa	Known RBP	3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	RMND5B	Q96G75	393 aa	Predicted RBP	3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	CPB2	Q96IY4	423 aa		3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	C12orf66	Q96MD2	445 aa		3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	SLC25A22	Q9H936	323 aa		3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	CALHM2	Q9HA72	323 aa		3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	NRBP2	Q9NSY0	501 aa		3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	RAB26	Q9ULW5	256 aa		3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	ASF1A	Q9Y294	204 aa		3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	GSTK1	Q9Y2Q3	226 aa		3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	MFHAS1	Q9Y4C4	1052 aa		3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895		U3KQV3	271 aa		3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895	DYNC2H1	Q8NCM8	4307 aa	Known RBP	3.56	□□□□□ -1.84
LINC01088-208	ENST00000511895		A0A0G2JRQ6	117 aa		3.55	□□□□□ -1.84
LINC01088-208	ENST00000511895	VSTM2B	A6NLU5	285 aa		3.55	□□□□□ -1.84
LINC01088-208	ENST00000511895	AK1	P00568	194 aa		3.55	□□□□□ -1.84
LINC01088-208	ENST00000511895	RBMY1C	P0DJD4	496 aa		3.55	□□□□□ -1.84
LINC01088-208	ENST00000511895	TPSB2	P20231	275 aa		3.55	□□□□□ -1.84
LINC01088-208	ENST00000511895	HNRNPH3	P31942	346 aa	Known RBP	3.55	□□□□□ -1.84
LINC01088-208	ENST00000511895	LEP	P41159	167 aa		3.55	□□□□□ -1.84
LINC01088-208	ENST00000511895	PLA2G16	P53816	162 aa		3.55	□□□□□ -1.84
LINC01088-208	ENST00000511895	BID	P55957	195 aa		3.55	□□□□□ -1.84
LINC01088-208	ENST00000511895	NCBP1	Q09161	790 aa	Known RBP	3.55	□□□□□ -1.84
LINC01088-208	ENST00000511895	TPSAB1	Q15661	275 aa		3.55	□□□□□ -1.84
LINC01088-208	ENST00000511895	TRIM16L	Q309B1	348 aa		3.55	□□□□□ -1.84
LINC01088-208	ENST00000511895	ZSCAN25	Q6NSZ9	544 aa		3.55	□□□□□ -1.84
LINC01088-208	ENST00000511895	SVOPL	Q8N434	492 aa		3.55	□□□□□ -1.84
LINC01088-208	ENST00000511895	ATP6V0D2	Q8N8Y2	350 aa		3.55	□□□□□ -1.84
LINC01088-208	ENST00000511895	OR56B4	Q8NH76	319 aa		3.55	□□□□□ -1.84
LINC01088-208	ENST00000511895	BLOC1S5	Q8TDH9	187 aa		3.55	□□□□□ -1.84
LINC01088-208	ENST00000511895	PIGC	Q92535	297 aa		3.55	□□□□□ -1.84
LINC01088-208	ENST00000511895	STARD4	Q96DR4	205 aa		3.55	□□□□□ -1.84
LINC01088-208	ENST00000511895	ZNF416	Q9BWM5	594 aa		3.55	□□□□□ -1.84
LINC01088-208	ENST00000511895	GCNT4	Q9P109	453 aa		3.55	□□□□□ -1.84
LINC01088-208	ENST00000511895	GNG12	Q9UBI6	72 aa		3.55	□□□□□ -1.84
LINC01088-208	ENST00000511895	MTRF1L	Q9UGC7	380 aa	Known RBP	3.55	□□□□□ -1.84
LINC01088-208	ENST00000511895	ATP8B3	O60423	1300 aa		3.54	□□□□□ -1.84
LINC01088-208	ENST00000511895	FAM47DP	A6NHR8	397 aa		3.54	□□□□□ -1.84
LINC01088-208	ENST00000511895	C10orf142	B7Z368	130 aa		3.54	□□□□□ -1.84
LINC01088-208	ENST00000511895		G3V4G9	280 aa		3.54	□□□□□ -1.84
LINC01088-208	ENST00000511895	CCL21	O00585	134 aa		3.54	□□□□□ -1.84
LINC01088-208	ENST00000511895	CLDN3	O15551	220 aa		3.54	□□□□□ -1.84
LINC01088-208	ENST00000511895	NEBL	O76041	1014 aa		3.54	□□□□□ -1.84
LINC01088-208	ENST00000511895	LRAT	O95237	230 aa		3.54	□□□□□ -1.84
LINC01088-208	ENST00000511895		P04436	131 aa		3.54	□□□□□ -1.84
LINC01088-208	ENST00000511895	ATP6V1B2	P21281	511 aa		3.54	□□□□□ -1.84
LINC01088-208	ENST00000511895	HPCAL1	P37235	193 aa		3.54	□□□□□ -1.84
LINC01088-208	ENST00000511895	PPOX	P50336	477 aa		3.54	□□□□□ -1.84
LINC01088-208	ENST00000511895	AP3M2	P53677	418 aa		3.54	□□□□□ -1.84
LINC01088-208	ENST00000511895	SELENOT	P62341	195 aa		3.54	□□□□□ -1.84
LINC01088-208	ENST00000511895	CHRFAM7A	Q494W8	412 aa		3.54	□□□□□ -1.84
LINC01088-208	ENST00000511895	TFDP3	Q5H9I0	405 aa		3.54	□□□□□ -1.84
LINC01088-208	ENST00000511895	BLOC1S2	Q6QNY1	142 aa		3.54	□□□□□ -1.84
LINC01088-208	ENST00000511895	TMEM135	Q86UB9	458 aa		3.54	□□□□□ -1.84
LINC01088-208	ENST00000511895	ZNF786	Q8N393	782 aa		3.54	□□□□□ -1.84
LINC01088-208	ENST00000511895	STXBP6	Q8NFX7	210 aa		3.54	□□□□□ -1.84
LINC01088-208	ENST00000511895	OR2T3	Q8NH03	318 aa		3.54	□□□□□ -1.84
LINC01088-208	ENST00000511895	RASL11B	Q9BPW5	248 aa		3.54	□□□□□ -1.84
LINC01088-208	ENST00000511895	DDA1	Q9BW61	102 aa		3.54	□□□□□ -1.84
LINC01088-208	ENST00000511895	CXCL16	Q9H2A7	254 aa		3.54	□□□□□ -1.84
LINC01088-208	ENST00000511895	SMYD3	Q9H7B4	428 aa		3.54	□□□□□ -1.84
LINC01088-208	ENST00000511895	FN3KRP	Q9HA64	309 aa		3.54	□□□□□ -1.84
LINC01088-208	ENST00000511895	STMN3	Q9NZ72	180 aa		3.54	□□□□□ -1.84
LINC01088-208	ENST00000511895	UXT	Q9UBK9	157 aa	Predicted RBP	3.54	□□□□□ -1.84
LINC01088-208	ENST00000511895	MRPS18B	Q9Y676	258 aa	Known RBP	3.54	□□□□□ -1.84
LINC01088-208	ENST00000511895	WSB1	Q9Y6I7	421 aa		3.54	□□□□□ -1.84
LINC01088-208	ENST00000511895	DNAH1	Q9P2D7	4330 aa		3.53	□□□□□ -1.84
LINC01088-208	ENST00000511895	FAM166B	A8MTA8	275 aa		3.53	□□□□□ -1.84
LINC01088-208	ENST00000511895	GFY	I3L273	518 aa		3.53	□□□□□ -1.84
LINC01088-208	ENST00000511895	DIRAS3	O95661	229 aa		3.53	□□□□□ -1.84
LINC01088-208	ENST00000511895	CCL4	P13236	92 aa		3.53	□□□□□ -1.84
LINC01088-208	ENST00000511895	HTR2A	P28223	471 aa		3.53	□□□□□ -1.84
LINC01088-208	ENST00000511895	HTR1F	P30939	366 aa		3.53	□□□□□ -1.84
LINC01088-208	ENST00000511895	FGF9	P31371	208 aa	Predicted RBP	3.53	□□□□□ -1.84
LINC01088-208	ENST00000511895	YWHAB	P31946	246 aa	Known RBP	3.53	□□□□□ -1.84
LINC01088-208	ENST00000511895	CSNK1D	P48730	415 aa		3.53	□□□□□ -1.84
LINC01088-208	ENST00000511895	PJVK	Q0ZLH3	352 aa		3.53	□□□□□ -1.84

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