RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 SFXN3Q9BWM7 321 aa4.61□□□□□ -1.67
PHF3-210ENST00000509876 RGCCQ9H4X1 137 aa4.61□□□□□ -1.67
PHF3-210ENST00000509876 CMC2Q9NRP2 79 aa4.61□□□□□ -1.67
PHF3-210ENST00000509876 GPR27Q9NS67 375 aa4.61□□□□□ -1.67
PHF3-210ENST00000509876 TAS2R16Q9NYV7 291 aa4.61□□□□□ -1.67
PHF3-210ENST00000509876 SLC5A6Q9Y289 635 aa4.61□□□□□ -1.67
PHF3-210ENST00000509876 SELENOFO60613 162 aa4.61□□□□□ -1.67
PHF3-210ENST00000509876 SPI1P17947 270 aa4.61□□□□□ -1.67
PHF3-210ENST00000509876 HNRNPA0Q13151 305 aaKnown RBP4.61□□□□□ -1.67
PHF3-210ENST00000509876 PYHIN1Q6K0P9 492 aa4.61□□□□□ -1.67
PHF3-210ENST00000509876 MRPL14Q6P1L8 145 aaKnown RBP4.61□□□□□ -1.67
PHF3-210ENST00000509876 XKRXQ6PP77 449 aa4.61□□□□□ -1.67
PHF3-210ENST00000509876 HAVCR1Q96D42 359 aa4.61□□□□□ -1.67
PHF3-210ENST00000509876 GABARAPL1Q9H0R8 117 aa4.61□□□□□ -1.67
PHF3-210ENST00000509876 CXorf56Q9H5V9 222 aa4.61□□□□□ -1.67
PHF3-210ENST00000509876 SCP2D1Q9UJQ7 156 aa4.61□□□□□ -1.67
PHF3-210ENST00000509876 TCF20Q9UGU0 1960 aaKnown RBP4.61□□□□□ -1.67
PHF3-210ENST00000509876 ANKRD33BA6NCL7 494 aa4.61□□□□□ -1.67
PHF3-210ENST00000509876 AQP7P3A6NL99 342 aa4.61□□□□□ -1.67
PHF3-210ENST00000509876 P2RY10O00398 339 aa4.61□□□□□ -1.67
PHF3-210ENST00000509876 ABCD4O14678 606 aa4.61□□□□□ -1.67
PHF3-210ENST00000509876 BDKRB2P30411 391 aa4.61□□□□□ -1.67
PHF3-210ENST00000509876 BMXP51813 675 aa4.61□□□□□ -1.67
PHF3-210ENST00000509876 SKP2Q13309 424 aa4.61□□□□□ -1.67
PHF3-210ENST00000509876 RTP5Q14D33 572 aa4.61□□□□□ -1.67
PHF3-210ENST00000509876 COX15Q7KZN9 410 aa4.61□□□□□ -1.67
PHF3-210ENST00000509876 CALHM3Q86XJ0 350 aa4.61□□□□□ -1.67
PHF3-210ENST00000509876 TMEM171Q8WVE6 324 aa4.61□□□□□ -1.67
PHF3-210ENST00000509876 BORCS5Q969J3 196 aa4.61□□□□□ -1.67
PHF3-210ENST00000509876 DCLRE1CQ96SD1 692 aaKnown RBP4.61□□□□□ -1.67
PHF3-210ENST00000509876 MALT1Q9UDY8 824 aa4.61□□□□□ -1.67
PHF3-210ENST00000509876 WDR81Q562E7 1941 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 KIAA1671Q9BY89 1806 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 hCG_2014768A0A024R1R8 64 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 TEX13DA0A0J9YY54 714 aaPredicted RBP4.6□□□□□ -1.67
PHF3-210ENST00000509876 LIPT2A6NK58 231 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 M0R129 80 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 MPIG6BO95866 241 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 ARSBP15848 533 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 SERPINA2P20848 420 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 FOXL2P58012 376 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 AP1ARQ63HQ0 302 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 C22orf42Q6IC83 251 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 SNX29P2Q8IUI4 249 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 SIMC1Q8NDZ2 872 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 OR4F15Q8NGB8 312 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 OR1F12Q8NHA8 337 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 REEP6Q96HR9 211 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 TECTBQ96PL2 329 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 SIAEQ9HAT2 523 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 TRIM64A6NGJ6 449 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 AQP7O14520 342 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 MPPED1O15442 326 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 DENRO43583 198 aaKnown RBP4.6□□□□□ -1.67
PHF3-210ENST00000509876 CDK1P06493 297 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 SLC2A2P11168 524 aaPredicted RBP4.6□□□□□ -1.67
PHF3-210ENST00000509876 ACHEP22303 614 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 SNRPGP62308 76 aaKnown RBP4.6□□□□□ -1.67
PHF3-210ENST00000509876 IKZF1Q13422 519 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 GDPD3Q7L5L3 318 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 CMTM4Q8IZR5 234 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 SYNPRQ8TBG9 265 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 SLCO4A1Q96BD0 722 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 BARD1Q99728 777 aaKnown RBP4.6□□□□□ -1.67
PHF3-210ENST00000509876 NIPSNAP1Q9BPW8 284 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 PLK3Q9H4B4 646 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 SLC25A19Q9HC21 320 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 DPPA5A6NC42 116 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 PLPP3O14495 311 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 TSPAN2O60636 221 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 PAHP00439 452 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 ALPLP05186 524 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 STOMP27105 288 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 EGR3Q06889 387 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 ALKBH1Q13686 389 aaKnown RBP4.6□□□□□ -1.67
PHF3-210ENST00000509876 CD226Q15762 336 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 HFEQ30201 348 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 DGAT2L6Q6ZPD8 337 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 LRRC17Q8N6Y2 441 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 SAMD12Q8N8I0 201 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 ZNF511Q8NB15 262 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 MUL1Q969V5 352 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 ARSGQ96EG1 525 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 PIK3IP1Q96FE7 263 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 RNF170Q96K19 258 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 WACQ9BTA9 647 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 ELOVL5Q9NYP7 299 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 NTMQ9P121 344 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 LIPGQ9Y5X9 500 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 FAM240BA0A1B0GVZ2 78 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 L7N2F9 121 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 CYB5BO43169 146 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 ACTL6BO94805 426 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 MPGP29372 298 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 KLF3P57682 345 aaPredicted RBP4.6□□□□□ -1.67
PHF3-210ENST00000509876 VAMP2P63027 116 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 LHFPL2Q6ZUX7 228 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 USP51Q70EK9 711 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 ZNF573Q86YE8 665 aa4.6□□□□□ -1.67
PHF3-210ENST00000509876 MARVELD2Q8N4S9 558 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms