RNA–Protein interactions for RNA: ENST00000509165.1

NFKB1-208, Transcript of nuclear factor kappa B subunit 1, human

TSL 5

Gene NFKB1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFKB1-208	ENST00000509165	VWA2	Q5GFL6	755 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	COQ5	Q5HYK3	327 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	ADNP2	Q6IQ32	1131 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	SLC30A6	Q6NXT4	461 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	TMEM205	Q6UW68	189 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	TMIGD1	Q6UXZ0	262 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	GOLGA7	Q7Z5G4	137 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	SPATA19	Q7Z5L4	167 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	SYVN1	Q86TM6	617 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	FAM219A	Q8IW50	185 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	FAM9C	Q8IZT9	166 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	C2orf73	Q8N5S3	287 aa	Predicted RBP	3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	TEX9	Q8N6V9	391 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	CSNK1A1L	Q8N752	337 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	TTL	Q8NG68	377 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	OR7G3	Q8NG95	312 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	OR4F6	Q8NGB9	312 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	OR2Y1	Q8NGV0	311 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	ESAM	Q96AP7	390 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	NTNG2	Q96CW9	530 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	MS4A6E	Q96DS6	147 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	FCRL1	Q96LA6	429 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	ZNF597	Q96LX8	424 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	C1orf147	Q96MC9	270 aa	Predicted RBP	3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	PRAP1	Q96NZ9	151 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	OR52B2	Q96RD2	323 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	NAA11	Q9BSU3	229 aa	Predicted RBP	3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	KATNB1	Q9BVA0	655 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	ACAT2	Q9BWD1	397 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	ULBP3	Q9BZM4	244 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	NMUR2	Q9GZQ4	415 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	WDR55	Q9H6Y2	383 aa	Predicted RBP	3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	CUTC	Q9NTM9	273 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	UTP6	Q9NYH9	597 aa	Known RBP	3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	GPR83	Q9NYM4	423 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	TAS2R1	Q9NYW7	299 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	OPTC	Q9UBM4	332 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	MARCO	Q9UEW3	520 aa	Predicted RBP	3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	NXT1	Q9UKK6	140 aa	Known RBP	3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	SNX6	Q9UNH7	406 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	HCFC1	P51610	2035 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	ABCA1	O95477	2261 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165	NIN	Q8N4C6	2090 aa		3.18	□□□□□ -1.9
NFKB1-208	ENST00000509165		A0A0A6YYD5	115 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165		A0A0J9YVX5	310 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	NCF1B	A6NI72	391 aa	Predicted RBP	3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	NCF1C	A8MVU1	366 aa	Predicted RBP	3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165		F8VVB4	439 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165		F8VWA3	439 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	PSMD12	O00232	456 aa	Predicted RBP	3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	SLC28A1	O00337	649 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	RTCA	O00442	366 aa	Known RBP	3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	LSM1	O15116	133 aa	Known RBP	3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	UBD	O15205	165 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	GYG2	O15488	501 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	PRAF2	O60831	178 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	DNAJB6	O75190	326 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	OR4F21	O95013	312 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	ETHE1	O95571	254 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	KRT6A	P02538	564 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	KRT6B	P04259	564 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	YES1	P07947	543 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	KRT16	P08779	473 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	NCF1	P14598	390 aa	Predicted RBP	3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	NCF2	P19878	526 aa	Predicted RBP	3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	IL10	P22301	178 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	GPX3	P22352	226 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	MMP11	P24347	488 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	CXCR2	P25025	360 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	ZFP36L2	P47974	494 aa	Known RBP	3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	KRT6C	P48668	564 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	CCL11	P51671	97 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	CCNG1	P51959	295 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	FOXA1	P55317	472 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	VSX2	P58304	361 aa	Predicted RBP	3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	ERVK-8	P63133	956 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	DCD	P81605	110 aa	Known RBP	3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	CHIT1	Q13231	466 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	RIPK1	Q13546	671 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	ZNF273	Q14593	569 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	ABRAXAS2	Q15018	415 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	KIAA0040	Q15053	153 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	ZNF146	Q15072	292 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	MAPRE2	Q15555	327 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	ATP6AP1L	Q52LC2	224 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	LBH	Q53QV2	105 aa	Predicted RBP	3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	KRBOX4	Q5JUW0	171 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	C6orf136	Q5SQH8	315 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	CLEC6A	Q6EIG7	209 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	FAM166A	Q6J272	317 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	NIPAL1	Q6NVV3	410 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	H3F3C	Q6NXT2	135 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	IGFL2	Q6UWQ7	119 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	HACD2	Q6Y1H2	254 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	RPS27L	Q71UM5	84 aa	Known RBP	3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	PRSS41	Q7RTY9	318 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	C5orf24	Q7Z6I8	188 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	ASPG	Q86U10	573 aa		3.17	□□□□□ -1.9
NFKB1-208	ENST00000509165	TMEM126B	Q8IUX1	230 aa		3.17	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms