RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 AENQ8WTP8 325 aaKnown RBP2.82□□□□□ -1.96
TOPBP1-206ENST00000508524 TMEM158Q8WZ71 300 aa2.82□□□□□ -1.96
TOPBP1-206ENST00000508524 FCGR1BQ92637 280 aa2.82□□□□□ -1.96
TOPBP1-206ENST00000508524 FAM131CQ96AQ9 280 aa2.82□□□□□ -1.96
TOPBP1-206ENST00000508524 PGLYRP4Q96LB8 373 aa2.82□□□□□ -1.96
TOPBP1-206ENST00000508524 XPO6Q96QU8 1125 aaKnown RBP2.82□□□□□ -1.96
TOPBP1-206ENST00000508524 KCNK16Q96T55 309 aa2.82□□□□□ -1.96
TOPBP1-206ENST00000508524 ACBD6Q9BR61 282 aa2.82□□□□□ -1.96
TOPBP1-206ENST00000508524 TCHPQ9BT92 498 aa2.82□□□□□ -1.96
TOPBP1-206ENST00000508524 DUSP16Q9BY84 665 aa2.82□□□□□ -1.96
TOPBP1-206ENST00000508524 ASF1BQ9NVP2 202 aa2.82□□□□□ -1.96
TOPBP1-206ENST00000508524 IL19Q9UHD0 177 aa2.82□□□□□ -1.96
TOPBP1-206ENST00000508524 ATP6V1HQ9UI12 483 aa2.82□□□□□ -1.96
TOPBP1-206ENST00000508524 OARD1Q9Y530 152 aa2.82□□□□□ -1.96
TOPBP1-206ENST00000508524 WNK1Q9H4A3 2382 aa2.82□□□□□ -1.96
TOPBP1-206ENST00000508524 VWFP04275 2813 aa2.82□□□□□ -1.96
TOPBP1-206ENST00000508524 MYO7BQ6PIF6 2116 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 HELTA6NFD8 242 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 CCDC169A6NNP5 214 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 RAD51BO15315 384 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 SLC31A1O15431 190 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 RAD1O60671 282 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 JAK2O60674 1132 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 MED6O75586 246 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 TOM1L1O75674 476 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 KRTAP5-8O75690 187 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 CD5P06127 495 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 CHMLP26374 656 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 CD70P32970 193 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 PSMD8P48556 350 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 ACOT2P49753 483 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 ZNF136P52737 540 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 MTTPP55157 894 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 SH3BGRP55822 239 aaPredicted RBP2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 RIPPLY1Q0D2K3 151 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 EIF3IQ13347 325 aaKnown RBP2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 LDLRAP1Q5SW96 308 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 C9orf64Q5T6V5 341 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 ACSM5Q6NUN0 579 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 UNC5DQ6UXZ4 953 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 BLIDQ8IZY5 108 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 STK40Q8N2I9 435 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 C15orf54Q8N8G6 183 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 TMEM161BQ8NDZ6 487 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 ITLN2Q8WWU7 325 aaPredicted RBP2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 STARD8Q92502 1023 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 FBXO32Q969P5 355 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 RAB7BQ96AH8 199 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 PINX1Q96BK5 328 aaKnown RBP2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 BMFQ96LC9 184 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 FOPNLQ96NB1 174 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 CATSPER2Q96P56 530 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 CALN1Q9BXU9 219 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 IL37Q9NZH6 218 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 WARS2Q9UGM6 360 aaKnown RBP2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 ERVW-1Q9UQF0 538 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 TCHHQ07283 1943 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 CACNA1CQ13936 2221 aa2.81□□□□□ -1.96
TOPBP1-206ENST00000508524 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.81□□□□□ -1.962e-17■■■■■ 64.5
TOPBP1-206ENST00000508524 ZGRF1Q86YA3 2104 aa2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 MDC1Q14676 2089 aaKnown RBP2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 LRP4O75096 1905 aa2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 NYNRINQ9P2P1 1898 aaKnown RBP2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 FAM92AA1XBS5 289 aa2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 ARHGEF35A5YM69 484 aa2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 MKRN2OSH3BPM6 223 aa2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 CLDN3O15551 220 aa2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 AQP9O43315 295 aa2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 OPN1LWP04000 364 aa2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 RRASP10301 218 aa2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 CRISP2P16562 243 aa2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 MAGEA5P43359 124 aa2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 SLAQ13239 276 aa2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 LY6EQ16553 131 aa2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 HNRNPA1L2Q32P51 320 aaKnown RBP2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 OR52W1Q6IF63 320 aa2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 Q6ZSR6 202 aa2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 APTXQ7Z2E3 356 aaKnown RBP2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 SCD5Q86SK9 330 aa2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 LMX1AQ8TE12 382 aa2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 CCDC12Q8WUD4 166 aaPredicted RBP2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 NDRG1Q92597 394 aaKnown RBP2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 IFT74Q96LB3 600 aa2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 MRPL45Q9BRJ2 306 aaKnown RBP2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 PELOQ9BRX2 385 aaKnown RBP2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 THAP9Q9H5L6 903 aa2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 RDH14Q9HBH5 336 aa2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 YAE1D1Q9NRH1 226 aa2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 KIF25Q9UIL4 384 aa2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 ASF1AQ9Y294 204 aa2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 TRRAPQ9Y4A5 3859 aa2.8□□□□□ -1.96
TOPBP1-206ENST00000508524 SPTY2D1-AS1A0A0U1RR47 76 aa2.79□□□□□ -1.96
TOPBP1-206ENST00000508524 HEATR9A2RTY3 570 aa2.79□□□□□ -1.96
TOPBP1-206ENST00000508524 PRAMEF26H0Y7S4 382 aa2.79□□□□□ -1.96
TOPBP1-206ENST00000508524 STX7O15400 261 aaKnown RBP2.79□□□□□ -1.96
TOPBP1-206ENST00000508524 SSX5O60225 188 aa2.79□□□□□ -1.96
TOPBP1-206ENST00000508524 F10P00742 488 aa2.79□□□□□ -1.96
TOPBP1-206ENST00000508524 ALPPP05187 535 aa2.79□□□□□ -1.96
TOPBP1-206ENST00000508524 TCN2P20062 427 aa2.79□□□□□ -1.96
TOPBP1-206ENST00000508524 TBPP20226 339 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms