RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 RGS7BPQ6MZT1 257 aaPredicted RBP8.09□□□□□ -1.11
DDX41-209ENST00000508279 SMARCD3Q6STE5 483 aa8.09□□□□□ -1.11
DDX41-209ENST00000508279 DPPA2Q7Z7J5 298 aa8.09□□□□□ -1.11
DDX41-209ENST00000508279 CPEB3Q8NE35 698 aaKnown RBP8.09□□□□□ -1.11
DDX41-209ENST00000508279 OR1J2Q8NGS2 313 aa8.09□□□□□ -1.11
DDX41-209ENST00000508279 FNDC8Q8TC99 324 aa8.09□□□□□ -1.11
DDX41-209ENST00000508279 MRPL24Q96A35 216 aaKnown RBP8.09□□□□□ -1.11
DDX41-209ENST00000508279 NABP1Q96AH0 204 aa8.09□□□□□ -1.11
DDX41-209ENST00000508279 NMD3Q96D46 503 aaKnown RBP8.09□□□□□ -1.11
DDX41-209ENST00000508279 DHRS1Q96LJ7 313 aa8.09□□□□□ -1.11
DDX41-209ENST00000508279 ERMAPQ96PL5 475 aaPredicted RBP8.09□□□□□ -1.11
DDX41-209ENST00000508279 GPA33Q99795 319 aa8.09□□□□□ -1.11
DDX41-209ENST00000508279 THTPAQ9BU02 230 aa8.09□□□□□ -1.11
DDX41-209ENST00000508279 SMURF2Q9HAU4 748 aa8.09□□□□□ -1.11
DDX41-209ENST00000508279 EMC7Q9NPA0 242 aa8.09□□□□□ -1.11
DDX41-209ENST00000508279 IL1RAPQ9NPH3 570 aa8.09□□□□□ -1.11
DDX41-209ENST00000508279 ACTR3BQ9P1U1 418 aa8.09□□□□□ -1.11
DDX41-209ENST00000508279 ZANQ9Y493 2812 aa8.09□□□□□ -1.11
DDX41-209ENST00000508279 SLC22A23A1A5C7 686 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 PRSS37A4D1T9 235 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 C5orf49A4QMS7 147 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 INAFM1C9JVW0 142 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 TNFRSF11BO00300 401 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 MGRN1O60291 552 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 SLC16A7O60669 478 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 PTP4A3O75365 173 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 SCG5P05408 212 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 MMP7P09237 267 aaPredicted RBP8.08□□□□□ -1.12
DDX41-209ENST00000508279 CSF3P09919 207 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 T-ENOLP0DO92 83 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 CTLA4P16410 223 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 MSR1P21757 451 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 STOMP27105 288 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 NOS3P29474 1203 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 SDHAP31040 664 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 IFNGR2P38484 337 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 PPOXP50336 477 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 GDI2P50395 445 aaKnown RBP8.08□□□□□ -1.12
DDX41-209ENST00000508279 SELENOVP59797 346 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 PSG4Q00888 419 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 MS4A2Q01362 244 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 GLO1Q04760 184 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 TRIM25Q14258 630 aaKnown RBP8.08□□□□□ -1.12
DDX41-209ENST00000508279 GGTLC2Q14390 218 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 NKPD1Q17RQ9 610 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 SPATS1Q496A3 300 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 NRN1LQ496H8 165 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 IQCCQ4KMZ1 466 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 SPATA46Q5T0L3 261 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 ZNF774Q6NX45 483 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 UGT2A3Q6UWM9 527 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 DPY19L2P2Q6ZN68 376 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 PTCHD4Q6ZW05 846 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 TRPM8Q7Z2W7 1104 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 FAM122BQ7Z309 247 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 ZER1Q7Z7L7 766 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 JAZF1Q86VZ6 243 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 ARHGAP24Q8N264 748 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 OR10H5Q8NGA6 315 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 OR9Q2Q8NGE9 314 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 OR1J1Q8NGS3 322 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 GNPDA2Q8TDQ7 276 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 C10orf105Q8TEF2 133 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 SAMD8Q96LT4 415 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 DOK1Q99704 481 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 PIMREGQ9BSJ6 248 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 IFT27Q9BW83 186 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 ZNF416Q9BWM5 594 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 SYT4Q9H2B2 425 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 OR52D1Q9H346 318 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 C1orf198Q9H425 327 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 POLE4Q9NR33 117 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 MYEF2Q9P2K5 600 aaKnown RBP8.08□□□□□ -1.12
DDX41-209ENST00000508279 EIF3KQ9UBQ5 218 aaKnown RBP8.08□□□□□ -1.12
DDX41-209ENST00000508279 REV1Q9UBZ9 1251 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 COA3Q9Y2R0 106 aaPredicted RBP8.08□□□□□ -1.12
DDX41-209ENST00000508279 POLR1DQ9Y2S0 133 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 U3KQV3 271 aa8.08□□□□□ -1.12
DDX41-209ENST00000508279 TCRBV5S2A0A599 114 aa8.07□□□□□ -1.12
DDX41-209ENST00000508279 C12orf71A8MTZ7 269 aa8.07□□□□□ -1.12
DDX41-209ENST00000508279 LYNX1G3V0Z9 82 aa8.07□□□□□ -1.12
DDX41-209ENST00000508279 M0R233 179 aa8.07□□□□□ -1.12
DDX41-209ENST00000508279 GYG2O15488 501 aa8.07□□□□□ -1.12
DDX41-209ENST00000508279 SYNGR3O43761 229 aa8.07□□□□□ -1.12
DDX41-209ENST00000508279 KHDRBS3O75525 346 aaKnown RBP8.07□□□□□ -1.12
DDX41-209ENST00000508279 UBOX5O94941 541 aa8.07□□□□□ -1.12
DDX41-209ENST00000508279 MPZL1O95297 269 aa8.07□□□□□ -1.12
DDX41-209ENST00000508279 GPANK1O95872 356 aa8.07□□□□□ -1.12
DDX41-209ENST00000508279 CLPTM1O96005 669 aa8.07□□□□□ -1.12
DDX41-209ENST00000508279 CST2P09228 141 aa8.07□□□□□ -1.12
DDX41-209ENST00000508279 LYNX1P0DP58 116 aa8.07□□□□□ -1.12
DDX41-209ENST00000508279 NAT2P11245 290 aa8.07□□□□□ -1.12
DDX41-209ENST00000508279 DAOP14920 347 aa8.07□□□□□ -1.12
DDX41-209ENST00000508279 SLC25A16P16260 332 aa8.07□□□□□ -1.12
DDX41-209ENST00000508279 HOXB4P17483 251 aaPredicted RBP8.07□□□□□ -1.12
DDX41-209ENST00000508279 SLC6A6P31641 620 aa8.07□□□□□ -1.12
DDX41-209ENST00000508279 CDKN2AP42771 156 aaKnown RBP8.07□□□□□ -1.12
DDX41-209ENST00000508279 RAD52P43351 418 aa8.07□□□□□ -1.12
DDX41-209ENST00000508279 ERFP50548 548 aa8.07□□□□□ -1.12
DDX41-209ENST00000508279 UCP2P55851 309 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms