RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 FOSL2P15408 326 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 ZNF28P17035 718 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 ZNF81P51508 661 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 DCDP81605 110 aaKnown RBP13.01□□□□□ -0.33
DDX41-208ENST00000507955 ASPHD2Q6ICH7 369 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 KCTD20Q7Z5Y7 419 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 TSEN15Q8WW01 171 aaKnown RBP13.01□□□□□ -0.33
DDX41-208ENST00000507955 NXPE2Q96DL1 559 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 SEMA4CQ9C0C4 833 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 TGIF2Q9GZN2 237 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 HRASLSQ9HDD0 168 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 COPZ2Q9P299 210 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 MYEF2Q9P2K5 600 aaKnown RBP13.01□□□□□ -0.33
DDX41-208ENST00000507955 RARRES3Q9UL19 164 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 SRPK3Q9UPE1 567 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 AUP1Q9Y679 476 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 LOC101059948A0A1B0GTJ6 334 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 SCO1O75880 301 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 MT-ATP6P00846 226 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 DNASE1P24855 282 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 HOXD11P31277 338 aaPredicted RBP13.01□□□□□ -0.33
DDX41-208ENST00000507955 VEGFCP49767 419 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 CCR9P51686 369 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 POU3F1Q03052 451 aaPredicted RBP13.01□□□□□ -0.33
DDX41-208ENST00000507955 DYRK1AQ13627 763 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 EXOSC2Q13868 293 aaKnown RBP13.01□□□□□ -0.33
DDX41-208ENST00000507955 EIF2B1Q14232 305 aaKnown RBP13.01□□□□□ -0.33
DDX41-208ENST00000507955 SMUG1Q53HV7 270 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 NLRC3Q7RTR2 1065 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 LUZP2Q86TE4 346 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 SLC38A6Q8IZM9 456 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 OR56B4Q8NH76 319 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 C4orf45Q96LM5 186 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 SPSB2Q99619 263 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 CRB3Q9BUF7 120 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 ABHD6Q9BV23 337 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 GAREM1Q9H706 876 aa13.01□□□□□ -0.33
DDX41-208ENST00000507955 PHF3Q92576 2039 aaKnown RBP13□□□□□ -0.33
DDX41-208ENST00000507955 TRBV5-5A0A0J9YX44 114 aa13□□□□□ -0.33
DDX41-208ENST00000507955 ANXA2P2A6NMY6 339 aa13□□□□□ -0.33
DDX41-208ENST00000507955 EIF1AYO14602 144 aaKnown RBP13□□□□□ -0.33
DDX41-208ENST00000507955 CTDSPLO15194 276 aa13□□□□□ -0.33
DDX41-208ENST00000507955 ANXA2P07355 339 aaKnown RBP13□□□□□ -0.33
DDX41-208ENST00000507955 PTH2RP49190 550 aa13□□□□□ -0.33
DDX41-208ENST00000507955 SLC17A1Q14916 467 aa13□□□□□ -0.33
DDX41-208ENST00000507955 NR0B2Q15466 257 aa13□□□□□ -0.33
DDX41-208ENST00000507955 RABEPKQ7Z6M1 372 aa13□□□□□ -0.33
DDX41-208ENST00000507955 DND1Q8IYX4 353 aaKnown RBP13□□□□□ -0.33
DDX41-208ENST00000507955 PLPP7Q8NBV4 271 aa13□□□□□ -0.33
DDX41-208ENST00000507955 OR51D1Q8NGF3 324 aa13□□□□□ -0.33
DDX41-208ENST00000507955 MFRPQ9BY79 579 aa13□□□□□ -0.33
DDX41-208ENST00000507955 OR10A4Q9H209 315 aa13□□□□□ -0.33
DDX41-208ENST00000507955 METTL17Q9H7H0 456 aaPredicted RBP13□□□□□ -0.33
DDX41-208ENST00000507955 GLTPQ9NZD2 209 aa13□□□□□ -0.33
DDX41-208ENST00000507955 IGLV3-12A0A075B6K2 115 aa13□□□□□ -0.33
DDX41-208ENST00000507955 MEIS3P1A6NDR6 274 aa13□□□□□ -0.33
DDX41-208ENST00000507955 PDCD5O14737 125 aa13□□□□□ -0.33
DDX41-208ENST00000507955 LMX1BO60663 402 aa13□□□□□ -0.33
DDX41-208ENST00000507955 PEX14O75381 377 aa13□□□□□ -0.33
DDX41-208ENST00000507955 ZNF250P15622 560 aa13□□□□□ -0.33
DDX41-208ENST00000507955 KLK2P20151 261 aa13□□□□□ -0.33
DDX41-208ENST00000507955 EIF1AXP47813 144 aaKnown RBP13□□□□□ -0.33
DDX41-208ENST00000507955 RAG2P55895 527 aa13□□□□□ -0.33
DDX41-208ENST00000507955 SLC26A5P58743 744 aa13□□□□□ -0.33
DDX41-208ENST00000507955 ACY1Q03154 408 aa13□□□□□ -0.33
DDX41-208ENST00000507955 PUDPQ08623 228 aa13□□□□□ -0.33
DDX41-208ENST00000507955 TMEM69Q5SWH9 247 aa13□□□□□ -0.33
DDX41-208ENST00000507955 SLC22A10Q63ZE4 541 aa13□□□□□ -0.33
DDX41-208ENST00000507955 MAMSTRQ6ZN01 415 aa13□□□□□ -0.33
DDX41-208ENST00000507955 FGD2Q7Z6J4 655 aa13□□□□□ -0.33
DDX41-208ENST00000507955 KRT77Q7Z794 578 aa13□□□□□ -0.33
DDX41-208ENST00000507955 BIVMQ86UB2 503 aa13□□□□□ -0.33
DDX41-208ENST00000507955 WDR89Q96FK6 387 aaPredicted RBP13□□□□□ -0.33
DDX41-208ENST00000507955 DCBLD2Q96PD2 775 aa13□□□□□ -0.33
DDX41-208ENST00000507955 RBP7Q96R05 134 aa13□□□□□ -0.33
DDX41-208ENST00000507955 OR8B4Q96RC9 309 aa13□□□□□ -0.33
DDX41-208ENST00000507955 COMMD4Q9H0A8 199 aa13□□□□□ -0.33
DDX41-208ENST00000507955 FOXJ3Q9UPW0 622 aa13□□□□□ -0.33
DDX41-208ENST00000507955 NPTNQ9Y639 398 aa13□□□□□ -0.33
DDX41-208ENST00000507955 FKBP7Q9Y680 259 aa13□□□□□ -0.33
DDX41-208ENST00000507955 NCOR1O75376 2440 aa12.99□□□□□ -0.33
DDX41-208ENST00000507955 A0A1B0GTQ1 180 aa12.99□□□□□ -0.33
DDX41-208ENST00000507955 DCTDP32321 178 aa12.99□□□□□ -0.33
DDX41-208ENST00000507955 EGR3Q06889 387 aa12.99□□□□□ -0.33
DDX41-208ENST00000507955 PRAMEF20Q5VT98 475 aa12.99□□□□□ -0.33
DDX41-208ENST00000507955 YOD1Q5VVQ6 348 aaPredicted RBP12.99□□□□□ -0.33
DDX41-208ENST00000507955 OR2T35Q8NGX2 323 aa12.99□□□□□ -0.33
DDX41-208ENST00000507955 GPR148Q8TDV2 347 aa12.99□□□□□ -0.33
DDX41-208ENST00000507955 OIT3Q8WWZ8 545 aa12.99□□□□□ -0.33
DDX41-208ENST00000507955 C7orf50Q9BRJ6 194 aaKnown RBP12.99□□□□□ -0.33
DDX41-208ENST00000507955 ZNF436Q9C0F3 470 aaPredicted RBP12.99□□□□□ -0.33
DDX41-208ENST00000507955 FBXL2Q9UKC9 423 aa12.99□□□□□ -0.33
DDX41-208ENST00000507955 A0A1W2PNR3 127 aa12.99□□□□□ -0.33
DDX41-208ENST00000507955 SHOXO15266 292 aa12.99□□□□□ -0.33
DDX41-208ENST00000507955 ZNF254O75437 659 aa12.99□□□□□ -0.33
DDX41-208ENST00000507955 ITGA5P08648 1049 aa12.99□□□□□ -0.33
DDX41-208ENST00000507955 AP2S1P53680 142 aaPredicted RBP12.99□□□□□ -0.33
DDX41-208ENST00000507955 C17orf67Q0P5P2 114 aa12.99□□□□□ -0.33
DDX41-208ENST00000507955 NDUFAF7Q7L592 441 aa12.99□□□□□ -0.33
DDX41-208ENST00000507955 CPEB2Q7Z5Q1 589 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms