RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 PLSCR5A0PG75 271 aa11.67□□□□□ -0.54
DDR1-260ENST00000507533 FXYD1O00168 92 aa11.67□□□□□ -0.54
DDR1-260ENST00000507533 DCTN3O75935 186 aa11.67□□□□□ -0.54
DDR1-260ENST00000507533 CLPXO76031 633 aa11.67□□□□□ -0.54
DDR1-260ENST00000507533 MFN2O95140 757 aa11.67□□□□□ -0.54
DDR1-260ENST00000507533 SNAP29O95721 258 aa11.67□□□□□ -0.54
DDR1-260ENST00000507533 BCHEP06276 602 aa11.67□□□□□ -0.54
DDR1-260ENST00000507533 PRDX6P30041 224 aa11.67□□□□□ -0.54
DDR1-260ENST00000507533 CSNK1A1P48729 337 aa11.67□□□□□ -0.54
DDR1-260ENST00000507533 MMP15P51511 669 aa11.67□□□□□ -0.54
DDR1-260ENST00000507533 MTPNP58546 118 aa11.67□□□□□ -0.54
DDR1-260ENST00000507533 HOXC5Q00444 222 aa11.67□□□□□ -0.54
DDR1-260ENST00000507533 SELPLGQ14242 412 aa11.67□□□□□ -0.54
DDR1-260ENST00000507533 TMEM155Q4W5P6 130 aa11.67□□□□□ -0.54
DDR1-260ENST00000507533 ESCO2Q56NI9 601 aa11.67□□□□□ -0.54
DDR1-260ENST00000507533 SPRNQ5BIV9 151 aa11.67□□□□□ -0.54
DDR1-260ENST00000507533 RNF220Q5VTB9 566 aa11.67□□□□□ -0.54
DDR1-260ENST00000507533 NANOGP8Q6NSW7 305 aa11.67□□□□□ -0.54
DDR1-260ENST00000507533 TMEM53Q6P2H8 277 aa11.67□□□□□ -0.54
DDR1-260ENST00000507533 C10orf111Q8N326 155 aa11.67□□□□□ -0.54
DDR1-260ENST00000507533 OR10S1Q8NGN2 331 aa11.67□□□□□ -0.54
DDR1-260ENST00000507533 GEMIN6Q8WXD5 167 aaKnown RBP11.67□□□□□ -0.54
DDR1-260ENST00000507533 SLC38A4Q969I6 547 aa11.67□□□□□ -0.54
DDR1-260ENST00000507533 RCN3Q96D15 328 aa11.67□□□□□ -0.54
DDR1-260ENST00000507533 TMEM19Q96HH6 336 aa11.67□□□□□ -0.54
DDR1-260ENST00000507533 SH3GL1Q99961 368 aa11.67□□□□□ -0.54
DDR1-260ENST00000507533 LRMDAQ9H2I8 198 aa11.67□□□□□ -0.54
DDR1-260ENST00000507533 TMEM38AQ9H6F2 299 aa11.67□□□□□ -0.54
DDR1-260ENST00000507533 NANOGQ9H9S0 305 aa11.67□□□□□ -0.54
DDR1-260ENST00000507533 BCL2L10Q9HD36 194 aa11.67□□□□□ -0.54
DDR1-260ENST00000507533 ASH2LQ9UBL3 628 aa11.67□□□□□ -0.54
DDR1-260ENST00000507533 IL20RAQ9UHF4 553 aa11.67□□□□□ -0.54
DDR1-260ENST00000507533 TRAV36DV7A0A075B6V5 113 aa11.66□□□□□ -0.54
DDR1-260ENST00000507533 A0A087WUJ7 227 aa11.66□□□□□ -0.54
DDR1-260ENST00000507533 A0A0G2JPF8 293 aa11.66□□□□□ -0.54
DDR1-260ENST00000507533 ZSCAN5BA6NJL1 495 aa11.66□□□□□ -0.54
DDR1-260ENST00000507533 HNRNPCL2B2RXH8 293 aa11.66□□□□□ -0.54
DDR1-260ENST00000507533 HNRNPCL3B7ZW38 293 aa11.66□□□□□ -0.54
DDR1-260ENST00000507533 C5orf58C9J3I9 102 aa11.66□□□□□ -0.54
DDR1-260ENST00000507533 F5H0A9 414 aaPredicted RBP11.66□□□□□ -0.54
DDR1-260ENST00000507533 HNRNPCL1O60812 293 aaKnown RBP11.66□□□□□ -0.54
DDR1-260ENST00000507533 PTHP01270 115 aa11.66□□□□□ -0.54
DDR1-260ENST00000507533 HNRNPCL4P0DMR1 293 aa11.66□□□□□ -0.54
DDR1-260ENST00000507533 RBMXP38159 391 aaKnown RBP11.66□□□□□ -0.54
DDR1-260ENST00000507533 CDK6Q00534 326 aa11.66□□□□□ -0.54
DDR1-260ENST00000507533 LARS2Q15031 903 aaKnown RBP11.66□□□□□ -0.54
DDR1-260ENST00000507533 FAM189A2Q15884 450 aa11.66□□□□□ -0.54
DDR1-260ENST00000507533 KPRPQ5T749 579 aaPredicted RBP11.66□□□□□ -0.54
DDR1-260ENST00000507533 C5orf46Q6UWT4 87 aa11.66□□□□□ -0.54
DDR1-260ENST00000507533 BTNL3Q6UXE8 466 aa11.66□□□□□ -0.54
DDR1-260ENST00000507533 LRRN1Q6UXK5 716 aa11.66□□□□□ -0.54
DDR1-260ENST00000507533 NHLRC1Q6VVB1 395 aa11.66□□□□□ -0.54
DDR1-260ENST00000507533 BRD3OSQ6XYD6 125 aa11.66□□□□□ -0.54
DDR1-260ENST00000507533 Q6YL49 198 aa11.66□□□□□ -0.54
DDR1-260ENST00000507533 REC114Q7Z4M0 266 aa11.66□□□□□ -0.54
DDR1-260ENST00000507533 LRRC28Q86X40 367 aaPredicted RBP11.66□□□□□ -0.54
DDR1-260ENST00000507533 OR8J3Q8NGG0 315 aa11.66□□□□□ -0.54
DDR1-260ENST00000507533 LINC01006Q8NI28 216 aa11.66□□□□□ -0.54
DDR1-260ENST00000507533 BBS10Q8TAM1 723 aa11.66□□□□□ -0.54
DDR1-260ENST00000507533 MAL2Q969L2 176 aa11.66□□□□□ -0.54
DDR1-260ENST00000507533 CMTM5Q96DZ9 223 aa11.66□□□□□ -0.54
DDR1-260ENST00000507533 KAT8Q9H7Z6 458 aaKnown RBP11.66□□□□□ -0.54
DDR1-260ENST00000507533 EFCAB1Q9HAE3 211 aa11.66□□□□□ -0.54
DDR1-260ENST00000507533 RPS6KB2Q9UBS0 482 aa11.66□□□□□ -0.54
DDR1-260ENST00000507533 ZNF232Q9UNY5 417 aa11.66□□□□□ -0.54
DDR1-260ENST00000507533 CHST2Q9Y4C5 530 aa11.66□□□□□ -0.54
DDR1-260ENST00000507533 IQCMA0A1B0GVH7 501 aa11.65□□□□□ -0.54
DDR1-260ENST00000507533 ENTPD5O75356 428 aa11.65□□□□□ -0.54
DDR1-260ENST00000507533 FARS2O95363 451 aaKnown RBP11.65□□□□□ -0.54
DDR1-260ENST00000507533 VSIG8P0DPA2 414 aa11.65□□□□□ -0.54
DDR1-260ENST00000507533 MPV17P39210 176 aa11.65□□□□□ -0.54
DDR1-260ENST00000507533 PROK1P58294 105 aa11.65□□□□□ -0.54
DDR1-260ENST00000507533 C2orf68Q2NKX9 166 aa11.65□□□□□ -0.54
DDR1-260ENST00000507533 ZNF718Q3SXZ3 478 aa11.65□□□□□ -0.54
DDR1-260ENST00000507533 RPS26P11Q5JNZ5 115 aaPredicted RBP11.65□□□□□ -0.54
DDR1-260ENST00000507533 TMEM255AQ5JRV8 349 aa11.65□□□□□ -0.54
DDR1-260ENST00000507533 SPATA46Q5T0L3 261 aa11.65□□□□□ -0.54
DDR1-260ENST00000507533 THEM4Q5T1C6 240 aa11.65□□□□□ -0.54
DDR1-260ENST00000507533 FAM91A1Q658Y4 838 aa11.65□□□□□ -0.54
DDR1-260ENST00000507533 REEP3Q6NUK4 255 aa11.65□□□□□ -0.54
DDR1-260ENST00000507533 C6orf89Q6UWU4 347 aa11.65□□□□□ -0.54
DDR1-260ENST00000507533 WDR88Q6ZMY6 472 aa11.65□□□□□ -0.54
DDR1-260ENST00000507533 ZNF620Q6ZNG0 422 aa11.65□□□□□ -0.54
DDR1-260ENST00000507533 TMEM86BQ8N661 226 aa11.65□□□□□ -0.54
DDR1-260ENST00000507533 CCDC197Q8NCU1 140 aa11.65□□□□□ -0.54
DDR1-260ENST00000507533 NFKBIDQ8NI38 313 aa11.65□□□□□ -0.54
DDR1-260ENST00000507533 MRAPQ8TCY5 172 aa11.65□□□□□ -0.54
DDR1-260ENST00000507533 IPCEF1Q8WWN9 437 aaPredicted RBP11.65□□□□□ -0.54
DDR1-260ENST00000507533 SLC41A3Q96GZ6 507 aa11.65□□□□□ -0.54
DDR1-260ENST00000507533 SPATA9Q9BWV2 254 aa11.65□□□□□ -0.54
DDR1-260ENST00000507533 ARMC7Q9H6L4 198 aa11.65□□□□□ -0.54
DDR1-260ENST00000507533 CACYBPQ9HB71 228 aaKnown RBP11.65□□□□□ -0.54
DDR1-260ENST00000507533 NOX4Q9NPH5 578 aa11.65□□□□□ -0.54
DDR1-260ENST00000507533 CYSLTR2Q9NS75 346 aa11.65□□□□□ -0.54
DDR1-260ENST00000507533 TMEM106BQ9NUM4 274 aa11.65□□□□□ -0.54
DDR1-260ENST00000507533 TMEM38BQ9NVV0 291 aa11.65□□□□□ -0.54
DDR1-260ENST00000507533 DNAH3Q8TD57 4116 aa11.65□□□□□ -0.54
DDR1-260ENST00000507533 IGKV1D-42A0A075B6H8 117 aa11.64□□□□□ -0.55
DDR1-260ENST00000507533 C5orf63A6NC05 138 aa11.64□□□□□ -0.55
DDR1-260ENST00000507533 SERPINI2O75830 405 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms