RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 HPXP02790 462 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 H1F0P07305 194 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 CD14P08571 375 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 CST2P09228 141 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 FAM157BP0CG42 384 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 APEHP13798 732 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 HSD17B1P14061 328 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 RHCEP18577 417 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 APEX1P27695 318 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 WNT5AP41221 380 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 ALDH3B1P43353 468 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 OMPP47874 163 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 UCP2P55851 309 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 FXYD6P3P58550 94 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 PSMA6P60900 246 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 RAP1BP61224 184 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 ERVS71-1P61550 626 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 RAP1AP62834 184 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 MRPS11P82912 194 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 PSG4Q00888 419 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 HSF2Q03933 536 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 PLP2Q04941 152 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 ENDOGQ14249 297 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 MAD2L1BPQ15013 274 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 SGCAQ16586 387 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 TBC1D28Q2M2D7 210 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 CHRFAM7AQ494W8 412 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 GLYATQ6IB77 296 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 PODNL1Q6PEZ8 512 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 PIGWQ7Z7B1 504 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 CYP4Z1Q86W10 505 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 OR1J2Q8NGS2 313 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 NSMAFQ92636 917 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 C1orf159Q96HA4 380 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 RBP7Q96R05 134 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 GPX7Q96SL4 187 aaPredicted RBP7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 SOX7Q9BT81 388 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 BCL2L14Q9BZR8 327 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 WNT5BQ9H1J7 359 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 CD300AQ9UGN4 299 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 CDC42EP3Q9UKI2 254 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 FZR1Q9UM11 496 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 SAMD4AQ9UPU9 718 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 ADAM18Q9Y3Q7 739 aa7.77□□□□□ -1.17
PDLIM5-209ENST00000506632 TRBV4-1A0A0J9YWV2 114 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 LRP5LA4QPB2 252 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 LYNX1G3V0Z9 82 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 AHCYL1O43865 530 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 RP2O75695 350 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 SCG5P05408 212 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 FAM157CP0CG43 387 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 LYNX1P0DP58 116 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 TCN1P20061 433 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 IGFBP5P24593 272 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 STOMP27105 288 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 LAP3P28838 519 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 APLNRP35414 380 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 RAD52P43351 418 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 GYS2P54840 703 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 KLF3P57682 345 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 ERVK-25P63136 954 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 SEC23BQ15437 767 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 MESTQ5EB52 335 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 FAM166AQ6J272 317 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 THSD4Q6ZMP0 1018 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 CPLX4Q7Z7G2 160 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 SYT9Q86SS6 491 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 ZNF101Q8IZC7 436 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 PGAM4Q8N0Y7 254 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 RNF148Q8N7C7 305 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 SYNPRQ8TBG9 265 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 C11orf40Q8WZ69 217 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 HPS1Q92902 700 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 FAM46AQ96IP4 442 aaKnown RBP7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 Q96M85 177 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 OR2H1Q9GZK4 316 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 RACGAP1Q9H0H5 632 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 LRMDAQ9H2I8 198 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 KCNN2Q9H2S1 579 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 CHODLQ9H9P2 273 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 CCNB1IP1Q9NPC3 277 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 NRIP3Q9NQ35 241 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 POLE4Q9NR33 117 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 ARL8BQ9NVJ2 186 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 NKIRAS2Q9NYR9 191 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 ADA2Q9NZK5 511 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 TAAR3PQ9P1P4 343 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 LPAR3Q9UBY5 353 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 DUSP13Q9UII6 198 aa7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 FBN1P35555 2871 aaKnown RBP7.76□□□□□ -1.17
PDLIM5-209ENST00000506632 LOC100289279A0A1B0GTE1 492 aa7.75□□□□□ -1.17
PDLIM5-209ENST00000506632 A0A1W2PPW3 197 aa7.75□□□□□ -1.17
PDLIM5-209ENST00000506632 PRSS37A4D1T9 235 aa7.75□□□□□ -1.17
PDLIM5-209ENST00000506632 C17orf100A8MU93 164 aa7.75□□□□□ -1.17
PDLIM5-209ENST00000506632 H7C1C5 153 aa7.75□□□□□ -1.17
PDLIM5-209ENST00000506632 ARPC2O15144 300 aa7.75□□□□□ -1.17
PDLIM5-209ENST00000506632 DIRAS1O95057 198 aa7.75□□□□□ -1.17
PDLIM5-209ENST00000506632 NDUFB2O95178 105 aa7.75□□□□□ -1.17
PDLIM5-209ENST00000506632 TXNDC12O95881 172 aa7.75□□□□□ -1.17
PDLIM5-209ENST00000506632 IGHV3-13P01766 116 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms