RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 ZNF43P17038 809 aa12.29□□□□□ -0.44
SERF1B-204ENST00000506542 CHRNB4P30926 498 aa12.29□□□□□ -0.44
SERF1B-204ENST00000506542 NAA10P41227 235 aaPredicted RBP12.29□□□□□ -0.44
SERF1B-204ENST00000506542 BIDP55957 195 aa12.29□□□□□ -0.44
SERF1B-204ENST00000506542 ZNF85Q03923 595 aa12.29□□□□□ -0.44
SERF1B-204ENST00000506542 TFF3Q07654 80 aa12.29□□□□□ -0.44
SERF1B-204ENST00000506542 GALEQ14376 348 aa12.29□□□□□ -0.44
SERF1B-204ENST00000506542 TSTQ16762 297 aaKnown RBP12.29□□□□□ -0.44
SERF1B-204ENST00000506542 HBMQ6B0K9 141 aa12.29□□□□□ -0.44
SERF1B-204ENST00000506542 HDDC2Q7Z4H3 204 aa12.29□□□□□ -0.44
SERF1B-204ENST00000506542 WDFY1Q8IWB7 410 aa12.29□□□□□ -0.44
SERF1B-204ENST00000506542 RELL2Q8NC24 303 aaPredicted RBP12.29□□□□□ -0.44
SERF1B-204ENST00000506542 OR2T27Q8NH04 317 aa12.29□□□□□ -0.44
SERF1B-204ENST00000506542 OR2V1Q8NHB1 315 aa12.29□□□□□ -0.44
SERF1B-204ENST00000506542 ZHX1-C8orf76Q96EF9 292 aa12.29□□□□□ -0.44
SERF1B-204ENST00000506542 TBX5Q99593 518 aa12.29□□□□□ -0.44
SERF1B-204ENST00000506542 BCL7BQ9BQE9 202 aa12.29□□□□□ -0.44
SERF1B-204ENST00000506542 ALG8Q9BVK2 526 aa12.29□□□□□ -0.44
SERF1B-204ENST00000506542 ISYNA1Q9NPH2 558 aa12.29□□□□□ -0.44
SERF1B-204ENST00000506542 NPDC1Q9NQX5 325 aaPredicted RBP12.29□□□□□ -0.44
SERF1B-204ENST00000506542 KLHL13Q9P2N7 655 aa12.29□□□□□ -0.44
SERF1B-204ENST00000506542 B9D1Q9UPM9 204 aa12.29□□□□□ -0.44
SERF1B-204ENST00000506542 CAB39Q9Y376 341 aaPredicted RBP12.29□□□□□ -0.44
SERF1B-204ENST00000506542 POLQO75417 2590 aa12.28□□□□□ -0.44
SERF1B-204ENST00000506542 IGLV1-36A0A0B4J1U3 117 aa12.28□□□□□ -0.44
SERF1B-204ENST00000506542 A0A1W2PQL4 384 aaPredicted RBP12.28□□□□□ -0.44
SERF1B-204ENST00000506542 TRIM64BA6NI03 449 aa12.28□□□□□ -0.44
SERF1B-204ENST00000506542 CCRL2O00421 344 aa12.28□□□□□ -0.44
SERF1B-204ENST00000506542 SELENOFO60613 162 aa12.28□□□□□ -0.44
SERF1B-204ENST00000506542 CTLA4P16410 223 aa12.28□□□□□ -0.44
SERF1B-204ENST00000506542 CENPAP49450 140 aa12.28□□□□□ -0.44
SERF1B-204ENST00000506542 CARD18P57730 90 aa12.28□□□□□ -0.44
SERF1B-204ENST00000506542 POU4F3Q15319 338 aa12.28□□□□□ -0.44
SERF1B-204ENST00000506542 CTF1Q16619 201 aa12.28□□□□□ -0.44
SERF1B-204ENST00000506542 ZNF322Q6U7Q0 402 aaPredicted RBP12.28□□□□□ -0.44
SERF1B-204ENST00000506542 LYPD4Q6UWN0 246 aa12.28□□□□□ -0.44
SERF1B-204ENST00000506542 TMPRSS11AQ6ZMR5 421 aa12.28□□□□□ -0.44
SERF1B-204ENST00000506542 ADGRE4PQ86SQ3 457 aa12.28□□□□□ -0.44
SERF1B-204ENST00000506542 SLC35F2Q8IXU6 374 aa12.28□□□□□ -0.44
SERF1B-204ENST00000506542 ALDH16A1Q8IZ83 802 aa12.28□□□□□ -0.44
SERF1B-204ENST00000506542 ZNF511Q8NB15 262 aa12.28□□□□□ -0.44
SERF1B-204ENST00000506542 LILRB4Q8NHJ6 448 aa12.28□□□□□ -0.44
SERF1B-204ENST00000506542 SMAP2Q8WU79 429 aaPredicted RBP12.28□□□□□ -0.44
SERF1B-204ENST00000506542 GATAD2BQ8WXI9 593 aa12.28□□□□□ -0.44
SERF1B-204ENST00000506542 INTS12Q96CB8 462 aaKnown RBP12.28□□□□□ -0.44
SERF1B-204ENST00000506542 UCN2Q96RP3 112 aa12.28□□□□□ -0.44
SERF1B-204ENST00000506542 MARCH7Q9H992 704 aa12.28□□□□□ -0.44
SERF1B-204ENST00000506542 CLCF1Q9UBD9 225 aa12.28□□□□□ -0.44
SERF1B-204ENST00000506542 SMAD9O15198 467 aaKnown RBP12.27□□□□□ -0.45
SERF1B-204ENST00000506542 SLC16A7O60669 478 aa12.27□□□□□ -0.45
SERF1B-204ENST00000506542 AGAP20933 346 aa12.27□□□□□ -0.45
SERF1B-204ENST00000506542 CRABP1P29762 137 aa12.27□□□□□ -0.45
SERF1B-204ENST00000506542 CEACAM8P31997 349 aaPredicted RBP12.27□□□□□ -0.45
SERF1B-204ENST00000506542 BLVRAP53004 296 aa12.27□□□□□ -0.45
SERF1B-204ENST00000506542 ACSM1Q08AH1 577 aa12.27□□□□□ -0.45
SERF1B-204ENST00000506542 SSX1Q16384 188 aa12.27□□□□□ -0.45
SERF1B-204ENST00000506542 RIPPLY2Q5TAB7 128 aa12.27□□□□□ -0.45
SERF1B-204ENST00000506542 SLC16A9Q7RTY1 509 aa12.27□□□□□ -0.45
SERF1B-204ENST00000506542 TIGD4Q8IY51 512 aa12.27□□□□□ -0.45
SERF1B-204ENST00000506542 OR6X1Q8NH79 312 aa12.27□□□□□ -0.45
SERF1B-204ENST00000506542 OR10D3Q8NH80 312 aa12.27□□□□□ -0.45
SERF1B-204ENST00000506542 FNDC9Q8TBE3 224 aa12.27□□□□□ -0.45
SERF1B-204ENST00000506542 SPRYD4Q8WW59 207 aaPredicted RBP12.27□□□□□ -0.45
SERF1B-204ENST00000506542 SLC25A44Q96H78 314 aaPredicted RBP12.27□□□□□ -0.45
SERF1B-204ENST00000506542 EMC6Q9BV81 110 aa12.27□□□□□ -0.45
SERF1B-204ENST00000506542 MRPL13Q9BYD1 178 aaKnown RBP12.27□□□□□ -0.45
SERF1B-204ENST00000506542 RERGLQ9H628 205 aa12.27□□□□□ -0.45
SERF1B-204ENST00000506542 PTTG2Q9NZH5 202 aa12.27□□□□□ -0.45
SERF1B-204ENST00000506542 IGHV3-15A0A0B4J1V0 119 aa12.26□□□□□ -0.45
SERF1B-204ENST00000506542 SLC35F4A4IF30 521 aa12.26□□□□□ -0.45
SERF1B-204ENST00000506542 MBD3L4A6NDZ8 208 aaPredicted RBP12.26□□□□□ -0.45
SERF1B-204ENST00000506542 MBD3L3A6NE82 208 aaPredicted RBP12.26□□□□□ -0.45
SERF1B-204ENST00000506542 MBD3L5A6NJ08 208 aaPredicted RBP12.26□□□□□ -0.45
SERF1B-204ENST00000506542 CD8B2A6NJW9 211 aa12.26□□□□□ -0.45
SERF1B-204ENST00000506542 CXCL13O43927 109 aa12.26□□□□□ -0.45
SERF1B-204ENST00000506542 AQP8O94778 261 aa12.26□□□□□ -0.45
SERF1B-204ENST00000506542 ATE1O95260 518 aa12.26□□□□□ -0.45
SERF1B-204ENST00000506542 CPEP16870 476 aa12.26□□□□□ -0.45
SERF1B-204ENST00000506542 ENPP1P22413 925 aa12.26□□□□□ -0.45
SERF1B-204ENST00000506542 NR4A1P22736 598 aa12.26□□□□□ -0.45
SERF1B-204ENST00000506542 GADD45AP24522 165 aa12.26□□□□□ -0.45
SERF1B-204ENST00000506542 EIF1AXP47813 144 aaKnown RBP12.26□□□□□ -0.45
SERF1B-204ENST00000506542 SLC17A1Q14916 467 aa12.26□□□□□ -0.45
SERF1B-204ENST00000506542 PDSS1Q5T2R2 415 aa12.26□□□□□ -0.45
SERF1B-204ENST00000506542 DNM1P34Q6PK57 102 aa12.26□□□□□ -0.45
SERF1B-204ENST00000506542 SSX6Q7RTT6 188 aa12.26□□□□□ -0.45
SERF1B-204ENST00000506542 RFLNBQ8N5W9 214 aa12.26□□□□□ -0.45
SERF1B-204ENST00000506542 SYT14Q8NB59 555 aa12.26□□□□□ -0.45
SERF1B-204ENST00000506542 OR9K2Q8NGE7 335 aa12.26□□□□□ -0.45
SERF1B-204ENST00000506542 MBD3L2Q8NHZ7 208 aaPredicted RBP12.26□□□□□ -0.45
SERF1B-204ENST00000506542 ADAD1Q96M93 576 aaKnown RBP12.26□□□□□ -0.45
SERF1B-204ENST00000506542 SF3B5Q9BWJ5 86 aaKnown RBP12.26□□□□□ -0.45
SERF1B-204ENST00000506542 YIPF3Q9GZM5 350 aa12.26□□□□□ -0.45
SERF1B-204ENST00000506542 NDUFB11Q9NX14 153 aa12.26□□□□□ -0.45
SERF1B-204ENST00000506542 KLF2Q9Y5W3 355 aaPredicted RBP12.26□□□□□ -0.45
SERF1B-204ENST00000506542 TVP23AA6NH52 213 aa12.26□□□□□ -0.45
SERF1B-204ENST00000506542 AKAP8O43823 692 aaKnown RBP12.26□□□□□ -0.45
SERF1B-204ENST00000506542 LALBAP00709 142 aa12.26□□□□□ -0.45
SERF1B-204ENST00000506542 IL2RAP01589 272 aa12.26□□□□□ -0.45
SERF1B-204ENST00000506542 IGHG1P01857 330 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms