RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 SLC17A2O00624 439 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 ZNF35P13682 527 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 NME1P15531 152 aaKnown RBP6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 DLX5P56178 289 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 SEC61A1P61619 476 aaKnown RBP6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 ELAVL1Q15717 326 aaKnown RBP6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 RAB30Q15771 203 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 SGCBQ16585 318 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 SMUG1Q53HV7 270 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 NHLRC3Q5JS37 347 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 TEX30Q5JUR7 227 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 WDR45BQ5MNZ6 344 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 C1orf140Q5VVS0 124 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 DCAF12L2Q5VW00 463 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 TMEM225Q6GV28 225 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 ASPHD2Q6ICH7 369 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 LRFN4Q6PJG9 635 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 TMEM205Q6UW68 189 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 ALKAL2Q6UX46 152 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 C16orf47Q6ZP98 133 aaPredicted RBP6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 NUP54Q7Z3B4 507 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 ADGRG3Q86Y34 549 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 SMRP1Q8NCR6 262 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 COQ8AQ8NI60 647 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 RNF128Q8TEB7 428 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 ASB5Q8WWX0 329 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 ASB17Q8WXJ9 295 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 MARVELD3Q96A59 401 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 PNPLA2Q96AD5 504 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 ABHD6Q9BV23 337 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 WWTR1Q9GZV5 400 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 C12orf10Q9HB07 376 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 TAS2R4Q9NYW5 299 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 COPS7AQ9UBW8 275 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 CGGBP1Q9UFW8 167 aaPredicted RBP6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 OPN4Q9UHM6 478 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 COA3Q9Y2R0 106 aaPredicted RBP6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 EMC9Q9Y3B6 208 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 MMACHCQ9Y4U1 282 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 PCDH15Q96QU1 1955 aa6.86□□□□□ -1.31
PPARGC1A-204ENST00000506055 IGKV3D-11A0A0A0MRZ8 115 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 SLC22A23A1A5C7 686 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 LILRA5A6NI73 299 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 ALG1L2C9J202 215 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 TEX46H3BTG2 121 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 TSPAN2O60636 221 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 MT-ATP6P00846 226 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 MECP2P51608 486 aaKnown RBP6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 POLR2HP52434 150 aaKnown RBP6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 RIDAP52758 137 aaKnown RBP6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 EPHA4P54764 986 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 SCAND1P57086 179 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 SPOCK1Q08629 439 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 OR10K2Q6IF99 312 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 STEAP1BQ6NZ63 245 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 KCTD18Q6PI47 426 aaPredicted RBP6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 SLC29A4Q7RTT9 530 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 TMED4Q7Z7H5 227 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 JAGN1Q8N5M9 183 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 TSTD1Q8NFU3 115 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 OR6N1Q8NGY5 312 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 OR1L3Q8NH93 324 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 ZNF519Q8TB69 540 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 GPR119Q8TDV5 335 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 THAP3Q8WTV1 239 aaPredicted RBP6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 DAZLQ92904 295 aaKnown RBP6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 RBPMSQ93062 196 aaKnown RBP6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 C8orf44Q96CB5 159 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 ZNF587Q96SQ5 575 aaPredicted RBP6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 ARL6Q9H0F7 186 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 TXNIPQ9H3M7 391 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 POFUT1Q9H488 388 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 ZNF304Q9HCX3 659 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 EPHA6Q9UF33 1036 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 LRP12Q9Y561 859 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 MRPS18BQ9Y676 258 aaKnown RBP6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 ARID1BQ8NFD5 2236 aaPredicted RBP6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 IGLV1-36A0A0B4J1U3 117 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 IGHV3-20A0A0C4DH32 117 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 A8MVM7 634 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 B8ZZF3 427 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 M0QYG6 137 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 PLPP3O14495 311 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 SMAD9O15198 467 aaKnown RBP6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 DXOO77932 396 aaKnown RBP6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 CD2P06729 351 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 MYF5P13349 255 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 M6PRP20645 277 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 IL11P20809 199 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 FBLP22087 321 aaKnown RBP6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 HTR2CP28335 458 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 S100A11P31949 105 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 HSD11B2P80365 405 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 GLO1Q04760 184 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 HLXQ14774 488 aaPredicted RBP6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 FDX2Q6P4F2 183 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 TMEM65Q6PI78 240 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 LANCL3Q6ZV70 420 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 TMUB2Q71RG4 321 aa6.85□□□□□ -1.31
PPARGC1A-204ENST00000506055 LINC00346Q8IVM7 164 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 421.1 ms