RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 PARM1Q6UWI2 310 aa10.71□□□□□ -0.69
UBE3D-206ENST00000505226 KCNRGQ8N5I3 272 aa10.71□□□□□ -0.69
UBE3D-206ENST00000505226 CLRN3Q8NCR9 226 aa10.71□□□□□ -0.69
UBE3D-206ENST00000505226 WNT2BQ93097 391 aa10.71□□□□□ -0.69
UBE3D-206ENST00000505226 TAS2R3Q9NYW6 316 aa10.71□□□□□ -0.69
UBE3D-206ENST00000505226 CDV3Q9UKY7 258 aaKnown RBP10.71□□□□□ -0.69
UBE3D-206ENST00000505226 TNFSF18Q9UNG2 199 aa10.71□□□□□ -0.69
UBE3D-206ENST00000505226 B9D1Q9UPM9 204 aa10.71□□□□□ -0.69
UBE3D-206ENST00000505226 FARSAQ9Y285 508 aaKnown RBP10.71□□□□□ -0.69
UBE3D-206ENST00000505226 CFAP54Q96N23 3096 aa10.71□□□□□ -0.69
UBE3D-206ENST00000505226 PCP4L1A6NKN8 68 aa10.71□□□□□ -0.69
UBE3D-206ENST00000505226 C11orf98E9PRG8 122 aa10.71□□□□□ -0.69
UBE3D-206ENST00000505226 C5orf67F2Z3F1 127 aa10.71□□□□□ -0.69
UBE3D-206ENST00000505226 WDPCPO95876 746 aa10.71□□□□□ -0.69
UBE3D-206ENST00000505226 PLGP00747 810 aaPredicted RBP10.71□□□□□ -0.69
UBE3D-206ENST00000505226 CSN2P05814 226 aa10.71□□□□□ -0.69
UBE3D-206ENST00000505226 FUT7Q11130 342 aa10.71□□□□□ -0.69
UBE3D-206ENST00000505226 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.71□□□□□ -0.69
UBE3D-206ENST00000505226 TMEM225Q6GV28 225 aa10.71□□□□□ -0.69
UBE3D-206ENST00000505226 POMZP3Q6PJE2 187 aa10.71□□□□□ -0.69
UBE3D-206ENST00000505226 LINC00518Q8N0U6 118 aa10.71□□□□□ -0.69
UBE3D-206ENST00000505226 OR5M8Q8NGP6 311 aa10.71□□□□□ -0.69
UBE3D-206ENST00000505226 SLC37A2Q8TED4 501 aa10.71□□□□□ -0.69
UBE3D-206ENST00000505226 ASB5Q8WWX0 329 aa10.71□□□□□ -0.69
UBE3D-206ENST00000505226 SLC41A2Q96JW4 573 aa10.71□□□□□ -0.69
UBE3D-206ENST00000505226 OR8B4Q96RC9 309 aa10.71□□□□□ -0.69
UBE3D-206ENST00000505226 CERS4Q9HA82 394 aa10.71□□□□□ -0.69
UBE3D-206ENST00000505226 MRPL22Q9NWU5 206 aaKnown RBP10.71□□□□□ -0.69
UBE3D-206ENST00000505226 TAS2R4Q9NYW5 299 aa10.71□□□□□ -0.69
UBE3D-206ENST00000505226 KLK13Q9UKR3 277 aa10.71□□□□□ -0.69
UBE3D-206ENST00000505226 A0A1W2PPC1 479 aa10.71□□□□□ -0.7
UBE3D-206ENST00000505226 PNMTP11086 282 aa10.71□□□□□ -0.7
UBE3D-206ENST00000505226 CNR1P21554 472 aa10.71□□□□□ -0.7
UBE3D-206ENST00000505226 TACR3P29371 465 aa10.71□□□□□ -0.7
UBE3D-206ENST00000505226 PBX2P40425 430 aa10.71□□□□□ -0.7
UBE3D-206ENST00000505226 ATP1B3P54709 279 aa10.71□□□□□ -0.7
UBE3D-206ENST00000505226 UBE2IP63279 158 aaKnown RBP10.71□□□□□ -0.7
UBE3D-206ENST00000505226 IGLV3-21P80748 117 aaPredicted RBP10.71□□□□□ -0.7
UBE3D-206ENST00000505226 MC2RQ01718 297 aa10.71□□□□□ -0.7
UBE3D-206ENST00000505226 TAF13Q15543 124 aa10.71□□□□□ -0.7
UBE3D-206ENST00000505226 PDSS1Q5T2R2 415 aa10.71□□□□□ -0.7
UBE3D-206ENST00000505226 OR2W3Q7Z3T1 314 aa10.71□□□□□ -0.7
UBE3D-206ENST00000505226 FAM160A2Q8N612 972 aaPredicted RBP10.71□□□□□ -0.7
UBE3D-206ENST00000505226 VRK1Q99986 396 aaPredicted RBP10.71□□□□□ -0.7
UBE3D-206ENST00000505226 FAM117AQ9C073 453 aa10.71□□□□□ -0.7
UBE3D-206ENST00000505226 PCDHB16Q9NRJ7 776 aa10.71□□□□□ -0.7
UBE3D-206ENST00000505226 MSRAQ9UJ68 235 aa10.71□□□□□ -0.7
UBE3D-206ENST00000505226 VSIG4Q9Y279 399 aa10.71□□□□□ -0.7
UBE3D-206ENST00000505226 LMX1BO60663 402 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 GP1BAP07359 652 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 UBBP0CG47 229 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 UBCP0CG48 685 aaKnown RBP10.7□□□□□ -0.7
UBE3D-206ENST00000505226 NTSR1P30989 418 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 AKR1C2P52895 323 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 PSMD4P55036 377 aaKnown RBP10.7□□□□□ -0.7
UBE3D-206ENST00000505226 TAS2R19P59542 299 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 RPS27AP62979 156 aaKnown RBP10.7□□□□□ -0.7
UBE3D-206ENST00000505226 UBA52P62987 128 aaKnown RBP10.7□□□□□ -0.7
UBE3D-206ENST00000505226 AKR1C1Q04828 323 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 SQSTM1Q13501 440 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 NKPD1Q17RQ9 610 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 SLC22A6Q4U2R8 563 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 PABPC1L2AQ5JQF8 200 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 TEX30Q5JUR7 227 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 FDX2Q6P4F2 183 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 CHRDL2Q6WN34 429 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 YAF2Q8IY57 180 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 TMEM229BQ8NBD8 167 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 ZC3H10Q96K80 434 aaKnown RBP10.7□□□□□ -0.7
UBE3D-206ENST00000505226 DGAT2Q96PD7 388 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 EDEM2Q9BV94 578 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 LHX6Q9UPM6 363 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 PLCL2Q9UPR0 1127 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 LOC100509620A0A075B734 347 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 DCDC2BA2VCK2 349 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 FITM1A5D6W6 292 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 MPTX1A8MV57 137 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 SLC25A12O75746 678 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 KIF26BQ2KJY2 2108 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 SCGB2B2Q4G0G5 96 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 GLT8D1Q68CQ7 371 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 C11orf87Q6NUJ2 197 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 RTN4RL2Q86UN3 420 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 PARGQ86W56 976 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 ADAT1Q9BUB4 502 aaKnown RBP10.7□□□□□ -0.7
UBE3D-206ENST00000505226 DNTTIP1Q9H147 329 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 PRTFDC1Q9NRG1 225 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 FREM3P0C091 2139 aa10.7□□□□□ -0.7
UBE3D-206ENST00000505226 GON4LQ3T8J9 2241 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 TMEM235A6NFC5 223 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 MPZL1O95297 269 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 HLA-DQA2P01906 255 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 CD163Q86VB7 1156 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 SLC22A18ASQ8N1D0 253 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 TMEM185AQ8NFB2 350 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 PPP1R1CQ8WVI7 109 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 GABRG3Q99928 467 aa10.69□□□□□ -0.7
UBE3D-206ENST00000505226 NKX6-2Q9C056 277 aaPredicted RBP10.69□□□□□ -0.7
UBE3D-206ENST00000505226 PRMT8Q9NR22 394 aaPredicted RBP10.69□□□□□ -0.7
UBE3D-206ENST00000505226 LRP4O75096 1905 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms