RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 POM121L2Q96KW2 1035 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 TEAD3Q99594 435 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 SYT4Q9H2B2 425 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 KCNJ16Q9NPI9 418 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 COQ3Q9NZJ6 369 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 ACOD1A6NK06 481 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 PRR32B1ATL7 298 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 SHISA9B4DS77 424 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 MRPS14O60783 128 aaKnown RBP7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 OR6A2O95222 327 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 PLGP00747 810 aaPredicted RBP7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 MSR1P21757 451 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 TUBG1P23258 451 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 OPRL1P41146 370 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 CLRN1P58418 232 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 TRIP10Q15642 601 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 VASH1Q7L8A9 365 aaPredicted RBP7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 SLC16A9Q7RTY1 509 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 C1orf174Q8IYL3 243 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 SDR9C7Q8NEX9 313 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 OR52E2Q8NGJ4 325 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 OR2T4Q8NH00 348 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 RNF133Q8WVZ7 376 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 SPSB4Q96A44 273 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 EME1Q96AY2 570 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 ALKBH3Q96Q83 286 aaPredicted RBP7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 TUBG2Q9NRH3 451 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 USP9XQ93008 2570 aaPredicted RBP7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 IFNGP01579 166 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 CD1AP06126 327 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 OR8G3PP0DMU2 310 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 ACSM1Q08AH1 577 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 POU4F2Q12837 409 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 TMEM255AQ5JRV8 349 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 TTC23Q5W5X9 447 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 DNM1P34Q6PK57 102 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 DEGS2Q6QHC5 323 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 C11orf40Q8WZ69 217 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 ULBP2Q9BZM5 246 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 C1orf198Q9H425 327 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 CNOT2Q9NZN8 540 aaKnown RBP7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 CACNA1BQ00975 2339 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 ZNF726A6NNF4 738 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 BMP5P22003 454 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 GSTT1P30711 240 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 C11orf71Q6IPW1 123 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 CXXC5Q7LFL8 322 aaKnown RBP7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 MCEMP1Q8IX19 187 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 ZNF454Q8N9F8 522 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 CPEB3Q8NE35 698 aaKnown RBP7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 DNAJA3Q96EY1 480 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 PRRG4Q9BZD6 226 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 PRRG3Q9BZD7 231 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 OR2H1Q9GZK4 316 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 ACTR6Q9GZN1 396 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 C12orf49Q9H741 205 aa7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 LSM2Q9Y333 95 aaKnown RBP7.2□□□□□ -1.26
CDC42SE2-208ENST00000505065 RENP00797 406 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 GNAO1P09471 354 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 CLUP10909 449 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 ARR3P36575 388 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 CDK5R2Q13319 367 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 TAB1Q15750 504 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 UGT2A3Q6UWM9 527 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 DEPDC4Q8N2C3 294 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 ICA1LQ8NDH6 482 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 OR4K13Q8NH42 304 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 OTOSQ8NHW6 89 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 CYGBQ8WWM9 190 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 C1QTNF5Q9BXJ0 243 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 M0R3G1 203 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 ALOX5APP20292 161 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 SIRPAP78324 504 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 TLE4Q04727 773 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 FAPQ12884 760 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 ZNF771Q7L3S4 317 aaPredicted RBP7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 ZNF100Q8IYN0 542 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 VCX3BQ9H321 246 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 DUSP21Q9H596 190 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 INPP5EQ9NRR6 644 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 KIF17Q9P2E2 1029 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 COA3Q9Y2R0 106 aaPredicted RBP7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 ZFYVE26Q68DK2 2539 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 RIIAD1A6NNX1 92 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 WNT11O96014 354 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 DBTP11182 482 aaKnown RBP7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 AHCYP23526 432 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 EVX1P49640 407 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 ENTPD1P49961 510 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 HGFACQ04756 655 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 RAB35Q15286 201 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 CDONQ4KMG0 1287 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 C10orf53Q8N6V4 93 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 SLC38A2Q96QD8 506 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 ZNF416Q9BWM5 594 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 CLN6Q9NWW5 311 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 PCDHGB1Q9Y5G3 927 aa7.19□□□□□ -1.26
CDC42SE2-208ENST00000505065 ESPL1Q14674 2120 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 A0A1W2PPR1 153 aa7.18□□□□□ -1.26
CDC42SE2-208ENST00000505065 SLC22A31A6NKX4 558 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms