RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 MDH1P40925 334 aaKnown RBP11.19□□□□□ -0.62
DDX41-204ENST00000504807 GPR4P46093 362 aa11.19□□□□□ -0.62
DDX41-204ENST00000504807 UCP2P55851 309 aa11.19□□□□□ -0.62
DDX41-204ENST00000504807 FXYD6P3P58550 94 aa11.19□□□□□ -0.62
DDX41-204ENST00000504807 CTXN1P60606 82 aa11.19□□□□□ -0.62
DDX41-204ENST00000504807 RPL27P61353 136 aaKnown RBP11.19□□□□□ -0.62
DDX41-204ENST00000504807 LMO4P61968 165 aa11.19□□□□□ -0.62
DDX41-204ENST00000504807 CCL8P80075 99 aa11.19□□□□□ -0.62
DDX41-204ENST00000504807 PRKCDQ05655 676 aa11.19□□□□□ -0.62
DDX41-204ENST00000504807 CD47Q08722 323 aa11.19□□□□□ -0.62
DDX41-204ENST00000504807 ST3GAL3Q11203 375 aa11.19□□□□□ -0.62
DDX41-204ENST00000504807 SLC36A2Q495M3 483 aa11.19□□□□□ -0.62
DDX41-204ENST00000504807 NRN1LQ496H8 165 aa11.19□□□□□ -0.62
DDX41-204ENST00000504807 MESTQ5EB52 335 aa11.19□□□□□ -0.62
DDX41-204ENST00000504807 RGS7BPQ6MZT1 257 aaPredicted RBP11.19□□□□□ -0.62
DDX41-204ENST00000504807 TMEM53Q6P2H8 277 aa11.19□□□□□ -0.62
DDX41-204ENST00000504807 PCYOX1LQ8NBM8 494 aa11.19□□□□□ -0.62
DDX41-204ENST00000504807 RP9Q8TA86 221 aaKnown RBP11.19□□□□□ -0.62
DDX41-204ENST00000504807 MYLK2Q9H1R3 596 aa11.19□□□□□ -0.62
DDX41-204ENST00000504807 SIAEQ9HAT2 523 aa11.19□□□□□ -0.62
DDX41-204ENST00000504807 CDH20Q9HBT6 801 aa11.19□□□□□ -0.62
DDX41-204ENST00000504807 LPAR2Q9HBW0 351 aa11.19□□□□□ -0.62
DDX41-204ENST00000504807 TREM2Q9NZC2 230 aa11.19□□□□□ -0.62
DDX41-204ENST00000504807 SPEF1Q9Y4P9 236 aa11.19□□□□□ -0.62
DDX41-204ENST00000504807 C17orf100A8MU93 164 aa11.18□□□□□ -0.62
DDX41-204ENST00000504807 CENPBD1B2RD01 187 aa11.18□□□□□ -0.62
DDX41-204ENST00000504807 FARS2O95363 451 aaKnown RBP11.18□□□□□ -0.62
DDX41-204ENST00000504807 MMP15P51511 669 aa11.18□□□□□ -0.62
DDX41-204ENST00000504807 ZNF84P51523 738 aa11.18□□□□□ -0.62
DDX41-204ENST00000504807 RPS23P62266 143 aaKnown RBP11.18□□□□□ -0.62
DDX41-204ENST00000504807 SGCAQ16586 387 aa11.18□□□□□ -0.62
DDX41-204ENST00000504807 TBC1D28Q2M2D7 210 aa11.18□□□□□ -0.62
DDX41-204ENST00000504807 AVPI1Q5T686 147 aa11.18□□□□□ -0.62
DDX41-204ENST00000504807 ZNF774Q6NX45 483 aa11.18□□□□□ -0.62
DDX41-204ENST00000504807 LINC01356Q8N9X3 169 aa11.18□□□□□ -0.62
DDX41-204ENST00000504807 ICA1LQ8NDH6 482 aa11.18□□□□□ -0.62
DDX41-204ENST00000504807 ZNF540Q8NDQ6 660 aa11.18□□□□□ -0.62
DDX41-204ENST00000504807 IPCEF1Q8WWN9 437 aaPredicted RBP11.18□□□□□ -0.62
DDX41-204ENST00000504807 RDH5Q92781 318 aa11.18□□□□□ -0.62
DDX41-204ENST00000504807 HPS1Q92902 700 aa11.18□□□□□ -0.62
DDX41-204ENST00000504807 MARS2Q96GW9 593 aaKnown RBP11.18□□□□□ -0.62
DDX41-204ENST00000504807 GPA33Q99795 319 aa11.18□□□□□ -0.62
DDX41-204ENST00000504807 ZNF416Q9BWM5 594 aa11.18□□□□□ -0.62
DDX41-204ENST00000504807 OR2H1Q9GZK4 316 aa11.18□□□□□ -0.62
DDX41-204ENST00000504807 MS4A5Q9H3V2 200 aa11.18□□□□□ -0.62
DDX41-204ENST00000504807 SMURF2Q9HAU4 748 aa11.18□□□□□ -0.62
DDX41-204ENST00000504807 EMC7Q9NPA0 242 aa11.18□□□□□ -0.62
DDX41-204ENST00000504807 HINT3Q9NQE9 182 aaKnown RBP11.18□□□□□ -0.62
DDX41-204ENST00000504807 DCAF16Q9NXF7 216 aa11.18□□□□□ -0.62
DDX41-204ENST00000504807 FBXL3Q9UKT7 428 aa11.18□□□□□ -0.62
DDX41-204ENST00000504807 C5orf49A4QMS7 147 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 ZSCAN5BA6NJL1 495 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 VSTM5A8MXK1 200 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 EFCAB9A8MZ26 197 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 SLC22A2O15244 555 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 TMPRSS2O15393 492 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 DIRAS1O95057 198 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 AVPP01185 164 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 IFNA14P01570 189 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 IFNW1P05000 195 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 SAGP10523 405 aaPredicted RBP11.17□□□□□ -0.62
DDX41-204ENST00000504807 ACHEP22303 614 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 CCNOP22674 350 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 STOMP27105 288 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 GPR6P46095 362 aaPredicted RBP11.17□□□□□ -0.62
DDX41-204ENST00000504807 LIMS1P48059 325 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 KLF3P57682 345 aaPredicted RBP11.17□□□□□ -0.62
DDX41-204ENST00000504807 SEC23BQ15437 767 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 NKPD1Q17RQ9 610 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 THEM4Q5T1C6 240 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 FAM27BQ5VT28 67 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 THSD4Q6ZMP0 1018 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 C1orf229Q6ZS94 237 aaPredicted RBP11.17□□□□□ -0.62
DDX41-204ENST00000504807 MBOAT2Q6ZWT7 520 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 FAM122BQ7Z309 247 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 RNF148Q8N7C7 305 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 FAM156AQ8NDB6 213 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 SEMA6DQ8NFY4 1073 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 OR1J1Q8NGS3 322 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 SYNPRQ8TBG9 265 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 SLC25A40Q8TBP6 338 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 SLC7A13Q8TCU3 470 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 ZFAND2BQ8WV99 257 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 Q96M85 177 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 FUZQ9BT04 418 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 ZNF696Q9H7X3 374 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 ABCD2Q9UBJ2 740 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 EGFL7Q9UHF1 273 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 IL20RAQ9UHF4 553 aa11.17□□□□□ -0.62
DDX41-204ENST00000504807 FBXO9Q9UK97 447 aaPredicted RBP11.17□□□□□ -0.62
DDX41-204ENST00000504807 WNK1Q9H4A3 2382 aa11.16□□□□□ -0.62
DDX41-204ENST00000504807 IQCMA0A1B0GVH7 501 aa11.16□□□□□ -0.62
DDX41-204ENST00000504807 A0A1W2PPL8 197 aa11.16□□□□□ -0.62
DDX41-204ENST00000504807 TMEM89A2RUT3 159 aa11.16□□□□□ -0.62
DDX41-204ENST00000504807 RGS9O75916 674 aaPredicted RBP11.16□□□□□ -0.62
DDX41-204ENST00000504807 MPZL1O95297 269 aa11.16□□□□□ -0.62
DDX41-204ENST00000504807 GPANK1O95872 356 aa11.16□□□□□ -0.62
DDX41-204ENST00000504807 IGHV1-46P01743 117 aa11.16□□□□□ -0.62
DDX41-204ENST00000504807 IGHV3-13P01766 116 aa11.16□□□□□ -0.62
DDX41-204ENST00000504807 ERCC1P07992 297 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms