RNA–Protein interactions for RNA: ENST00000504786.5

GYPA-204, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-204ENST00000504786 HERPUD1Q15011 391 aa3.12□□□□□ -1.91
GYPA-204ENST00000504786 NCF4Q15080 339 aa3.12□□□□□ -1.91
GYPA-204ENST00000504786 GPR107Q5VW38 600 aa3.12□□□□□ -1.91
GYPA-204ENST00000504786 TMEM179Q6ZVK1 233 aa3.12□□□□□ -1.91
GYPA-204ENST00000504786 HDDC2Q7Z4H3 204 aa3.12□□□□□ -1.91
GYPA-204ENST00000504786 TMEM150AQ86TG1 271 aa3.12□□□□□ -1.91
GYPA-204ENST00000504786 APRG1Q8IVJ8 170 aa3.12□□□□□ -1.91
GYPA-204ENST00000504786 LINC00612Q8N6U2 182 aa3.12□□□□□ -1.91
GYPA-204ENST00000504786 C20orf203Q8NBC4 194 aa3.12□□□□□ -1.91
GYPA-204ENST00000504786 TMEM104Q8NE00 496 aa3.12□□□□□ -1.91
GYPA-204ENST00000504786 OR4F15Q8NGB8 312 aa3.12□□□□□ -1.91
GYPA-204ENST00000504786 ACER1Q8TDN7 264 aa3.12□□□□□ -1.91
GYPA-204ENST00000504786 PIH1D2Q8WWB5 315 aa3.12□□□□□ -1.91
GYPA-204ENST00000504786 IL22RA2Q969J5 263 aa3.12□□□□□ -1.91
GYPA-204ENST00000504786 APH1AQ96BI3 265 aa3.12□□□□□ -1.91
GYPA-204ENST00000504786 DNAJC1Q96KC8 554 aaKnown RBP3.12□□□□□ -1.91
GYPA-204ENST00000504786 C9orf72Q96LT7 481 aa3.12□□□□□ -1.91
GYPA-204ENST00000504786 ECSITQ9BQ95 431 aa3.12□□□□□ -1.91
GYPA-204ENST00000504786 NRIP2Q9BQI9 281 aa3.12□□□□□ -1.91
GYPA-204ENST00000504786 GABARAPL3Q9BY60 117 aa3.12□□□□□ -1.91
GYPA-204ENST00000504786 OR2AG1Q9H205 316 aa3.12□□□□□ -1.91
GYPA-204ENST00000504786 XKR8Q9H6D3 395 aa3.12□□□□□ -1.91
GYPA-204ENST00000504786 HAUS4Q9H6D7 363 aa3.12□□□□□ -1.91
GYPA-204ENST00000504786 ADAMTS9Q9P2N4 1935 aa3.12□□□□□ -1.91
GYPA-204ENST00000504786 CIB4A0PJX0 185 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 HDAC3O15379 428 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 NUPL2O15504 423 aaKnown RBP3.11□□□□□ -1.91
GYPA-204ENST00000504786 NPIPB7O75200 414 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 HSBP1O75506 76 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 UTS2O95399 124 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 LSM8O95777 96 aaKnown RBP3.11□□□□□ -1.91
GYPA-204ENST00000504786 HBE1P02100 147 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 ARG1P05089 322 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 CTRB1P17538 263 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 PTNP21246 168 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 CNR1P21554 472 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 LONP1P36776 959 aaKnown RBP3.11□□□□□ -1.91
GYPA-204ENST00000504786 TNFSF9P41273 254 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 RPS15AP62244 130 aaKnown RBP3.11□□□□□ -1.91
GYPA-204ENST00000504786 RPS21P63220 83 aaKnown RBP3.11□□□□□ -1.91
GYPA-204ENST00000504786 ZNF33AQ06730 810 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 GGTLC2Q14390 218 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 PRPSAP1Q14558 356 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 STK38Q15208 465 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 SGCAQ16586 387 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 ZSCAN26Q16670 478 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 TRMT5Q32P41 509 aaKnown RBP3.11□□□□□ -1.91
GYPA-204ENST00000504786 HNRNPA1L2Q32P51 320 aaKnown RBP3.11□□□□□ -1.91
GYPA-204ENST00000504786 RFX4Q33E94 735 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 COA6Q5JTJ3 125 aaKnown RBP3.11□□□□□ -1.91
GYPA-204ENST00000504786 LCE3EQ5T5B0 92 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 CCNJQ5T5M9 372 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 ULK3Q6PHR2 472 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 Q6ZR54 194 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 OAFQ86UD1 273 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 ZNF547Q8IVP9 402 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 MYOCDQ8IZQ8 938 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 OR2L5Q8NG80 312 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 OR10G9Q8NGN4 311 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 OR2A1Q8NGT9 310 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 MITD1Q8WV92 249 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 NAT6Q93015 286 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 CSPG4P5Q96PW8 444 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 NXF3Q9H4D5 531 aaKnown RBP3.11□□□□□ -1.91
GYPA-204ENST00000504786 EML4Q9HC35 981 aaKnown RBP3.11□□□□□ -1.91
GYPA-204ENST00000504786 ACP6Q9NPH0 428 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 STOX2Q9P2F5 926 aaPredicted RBP3.11□□□□□ -1.91
GYPA-204ENST00000504786 DDX19BQ9UMR2 479 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 HEBP2Q9Y5Z4 205 aa3.11□□□□□ -1.91
GYPA-204ENST00000504786 TRAV39A0A0B4J263 110 aa3.1□□□□□ -1.91
GYPA-204ENST00000504786 A0A0J9YYE9 177 aa3.1□□□□□ -1.91
GYPA-204ENST00000504786 LOC100653049A0A140TA62 436 aa3.1□□□□□ -1.91
GYPA-204ENST00000504786 A0A1B0GUH1 482 aa3.1□□□□□ -1.91
GYPA-204ENST00000504786 GJE1A6NN92 205 aa3.1□□□□□ -1.91
GYPA-204ENST00000504786 SMKR1H3BMG3 65 aa3.1□□□□□ -1.91
GYPA-204ENST00000504786 NDUFS8O00217 210 aa3.1□□□□□ -1.91
GYPA-204ENST00000504786 PLPP1O14494 284 aa3.1□□□□□ -1.91
GYPA-204ENST00000504786 HAT1O14929 419 aa3.1□□□□□ -1.91
GYPA-204ENST00000504786 EMC8O43402 210 aa3.1□□□□□ -1.91
GYPA-204ENST00000504786 KRT34O76011 436 aa3.1□□□□□ -1.91
GYPA-204ENST00000504786 SRP72O76094 671 aaKnown RBP3.1□□□□□ -1.91
GYPA-204ENST00000504786 FARS2O95363 451 aaKnown RBP3.1□□□□□ -1.91
GYPA-204ENST00000504786 SNAI1O95863 264 aaPredicted RBP3.1□□□□□ -1.91
GYPA-204ENST00000504786 C6orf47O95873 294 aa3.1□□□□□ -1.91
GYPA-204ENST00000504786 MOSP00540 346 aa3.1□□□□□ -1.91
GYPA-204ENST00000504786 TRBC1P01850 177 aa3.1□□□□□ -1.91
GYPA-204ENST00000504786 HPNP05981 417 aa3.1□□□□□ -1.91
GYPA-204ENST00000504786 CCDC172P0C7W6 258 aa3.1□□□□□ -1.91
GYPA-204ENST00000504786 IGHV3-43DP0DP04 118 aa3.1□□□□□ -1.91
GYPA-204ENST00000504786 NR2C1P13056 603 aa3.1□□□□□ -1.91
GYPA-204ENST00000504786 PMCHP20382 165 aa3.1□□□□□ -1.91
GYPA-204ENST00000504786 FUT3P21217 361 aa3.1□□□□□ -1.91
GYPA-204ENST00000504786 HRH1P35367 487 aa3.1□□□□□ -1.91
GYPA-204ENST00000504786 NBL1P41271 181 aa3.1□□□□□ -1.91
GYPA-204ENST00000504786 GPR1P46091 355 aa3.1□□□□□ -1.91
GYPA-204ENST00000504786 OR7A5Q15622 319 aa3.1□□□□□ -1.91
GYPA-204ENST00000504786 GABRA6Q16445 453 aa3.1□□□□□ -1.91
GYPA-204ENST00000504786 ZNF630Q2M218 657 aaPredicted RBP3.1□□□□□ -1.91
GYPA-204ENST00000504786 H3F3CQ6NXT2 135 aa3.1□□□□□ -1.91
GYPA-204ENST00000504786 LINC00173Q6ZV60 143 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms