RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 FNDC11Q9BVV2 318 aa11.98□□□□□ -0.49
PDLIM7-211ENST00000504318 RACGAP1Q9H0H5 632 aa11.98□□□□□ -0.49
PDLIM7-211ENST00000504318 ANKRD19PQ9H560 264 aa11.98□□□□□ -0.49
PDLIM7-211ENST00000504318 NMNAT1Q9HAN9 279 aaPredicted RBP11.98□□□□□ -0.49
PDLIM7-211ENST00000504318 SPAG4Q9NPE6 437 aa11.98□□□□□ -0.49
PDLIM7-211ENST00000504318 NDUFAF4Q9P032 175 aa11.98□□□□□ -0.49
PDLIM7-211ENST00000504318 STX18Q9P2W9 335 aaKnown RBP11.98□□□□□ -0.49
PDLIM7-211ENST00000504318 REV1Q9UBZ9 1251 aa11.98□□□□□ -0.49
PDLIM7-211ENST00000504318 ENPP4Q9Y6X5 453 aa11.98□□□□□ -0.49
PDLIM7-211ENST00000504318 A0A1W2PRQ8 180 aa11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 RP2O75695 350 aa11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 FARS2O95363 451 aaKnown RBP11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 ZNF682O95780 498 aa11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 FAM157BP0CG42 384 aa11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 COL8A2P25067 703 aa11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 APEX1P27695 318 aaKnown RBP11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 OMPP47874 163 aa11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 SLC9A3P48764 834 aa11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 GZMKP49863 264 aa11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 ZNF84P51523 738 aa11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 CTXN1P60606 82 aa11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 RPS23P62266 143 aaKnown RBP11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 PSG4Q00888 419 aa11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 TOP3AQ13472 1001 aaPredicted RBP11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 DGCR6Q14129 220 aa11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 ENDOGQ14249 297 aaKnown RBP11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 SEC23BQ15437 767 aa11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 SLC36A2Q495M3 483 aa11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 PABPC1L2AQ5JQF8 200 aa11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 C1orf146Q5VVC0 180 aa11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 TMEM53Q6P2H8 277 aa11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 PGM2L1Q6PCE3 622 aa11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 CXXC5Q7LFL8 322 aaKnown RBP11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 ZNF101Q8IZC7 436 aa11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 OR51A7Q8NH64 312 aa11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 KCTD14Q9BQ13 255 aaPredicted RBP11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 WNT5BQ9H1J7 359 aa11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 C1orf198Q9H425 327 aa11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 DYNLRB1Q9NP97 96 aa11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 DCAF13Q9NV06 445 aaKnown RBP11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 CD300AQ9UGN4 299 aa11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 EGFL7Q9UHF1 273 aa11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 ADAM18Q9Y3Q7 739 aa11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 SPEF1Q9Y4P9 236 aa11.97□□□□□ -0.49
PDLIM7-211ENST00000504318 TANC2Q9HCD6 1990 aa11.96□□□□□ -0.49
PDLIM7-211ENST00000504318 VSTM5A8MXK1 200 aa11.96□□□□□ -0.49
PDLIM7-211ENST00000504318 IMPA2O14732 288 aa11.96□□□□□ -0.49
PDLIM7-211ENST00000504318 LMX1BO60663 402 aa11.96□□□□□ -0.49
PDLIM7-211ENST00000504318 ENTPD5O75356 428 aa11.96□□□□□ -0.49
PDLIM7-211ENST00000504318 FAM157CP0CG43 387 aa11.96□□□□□ -0.49
PDLIM7-211ENST00000504318 APEHP13798 732 aaKnown RBP11.96□□□□□ -0.49
PDLIM7-211ENST00000504318 GPR4P46093 362 aa11.96□□□□□ -0.49
PDLIM7-211ENST00000504318 UCP2P55851 309 aa11.96□□□□□ -0.49
PDLIM7-211ENST00000504318 GALK2Q01415 458 aa11.96□□□□□ -0.49
PDLIM7-211ENST00000504318 CHRFAM7AQ494W8 412 aa11.96□□□□□ -0.49
PDLIM7-211ENST00000504318 MESTQ5EB52 335 aa11.96□□□□□ -0.49
PDLIM7-211ENST00000504318 SAMD4BQ5PRF9 694 aaKnown RBP11.96□□□□□ -0.49
PDLIM7-211ENST00000504318 THEM4Q5T1C6 240 aa11.96□□□□□ -0.49
PDLIM7-211ENST00000504318 FAM205BPQ63HN1 556 aa11.96□□□□□ -0.49
PDLIM7-211ENST00000504318 PODNL1Q6PEZ8 512 aa11.96□□□□□ -0.49
PDLIM7-211ENST00000504318 THSD4Q6ZMP0 1018 aa11.96□□□□□ -0.49
PDLIM7-211ENST00000504318 NSMAFQ92636 917 aa11.96□□□□□ -0.49
PDLIM7-211ENST00000504318 GTF3AQ92664 365 aaKnown RBP11.96□□□□□ -0.49
PDLIM7-211ENST00000504318 GPX7Q96SL4 187 aaPredicted RBP11.96□□□□□ -0.49
PDLIM7-211ENST00000504318 GPA33Q99795 319 aa11.96□□□□□ -0.49
PDLIM7-211ENST00000504318 ZNF416Q9BWM5 594 aa11.96□□□□□ -0.49
PDLIM7-211ENST00000504318 CDC42EP3Q9UKI2 254 aa11.96□□□□□ -0.49
PDLIM7-211ENST00000504318 SIGLEC7Q9Y286 467 aa11.96□□□□□ -0.49
PDLIM7-211ENST00000504318 STAB1Q9NY15 2570 aa11.96□□□□□ -0.5
PDLIM7-211ENST00000504318 TRBV4-1A0A0J9YWV2 114 aa11.95□□□□□ -0.5
PDLIM7-211ENST00000504318 SLC22A23A1A5C7 686 aa11.95□□□□□ -0.5
PDLIM7-211ENST00000504318 EFCAB9A8MZ26 197 aa11.95□□□□□ -0.5
PDLIM7-211ENST00000504318 H7C1C5 153 aa11.95□□□□□ -0.5
PDLIM7-211ENST00000504318 WNT9BO14905 357 aa11.95□□□□□ -0.5
PDLIM7-211ENST00000504318 CST2P09228 141 aa11.95□□□□□ -0.5
PDLIM7-211ENST00000504318 SAGP10523 405 aaPredicted RBP11.95□□□□□ -0.5
PDLIM7-211ENST00000504318 NAT2P11245 290 aa11.95□□□□□ -0.5
PDLIM7-211ENST00000504318 HSD17B1P14061 328 aa11.95□□□□□ -0.5
PDLIM7-211ENST00000504318 TCN1P20061 433 aaPredicted RBP11.95□□□□□ -0.5
PDLIM7-211ENST00000504318 ACTR3P61158 418 aa11.95□□□□□ -0.5
PDLIM7-211ENST00000504318 LCN6P62502 163 aa11.95□□□□□ -0.5
PDLIM7-211ENST00000504318 MRPS11P82912 194 aaKnown RBP11.95□□□□□ -0.5
PDLIM7-211ENST00000504318 CD47Q08722 323 aa11.95□□□□□ -0.5
PDLIM7-211ENST00000504318 KPNB1Q14974 876 aaKnown RBP11.95□□□□□ -0.5
PDLIM7-211ENST00000504318 CARTPTQ16568 116 aa11.95□□□□□ -0.5
PDLIM7-211ENST00000504318 ZBED5Q49AG3 693 aa11.95□□□□□ -0.5
PDLIM7-211ENST00000504318 GLYATQ6IB77 296 aa11.95□□□□□ -0.5
PDLIM7-211ENST00000504318 RGS7BPQ6MZT1 257 aaPredicted RBP11.95□□□□□ -0.5
PDLIM7-211ENST00000504318 UGT2A3Q6UWM9 527 aa11.95□□□□□ -0.5
PDLIM7-211ENST00000504318 OAFQ86UD1 273 aa11.95□□□□□ -0.5
PDLIM7-211ENST00000504318 ZNF540Q8NDQ6 660 aa11.95□□□□□ -0.5
PDLIM7-211ENST00000504318 AKR7LQ8NHP1 331 aa11.95□□□□□ -0.5
PDLIM7-211ENST00000504318 HPS1Q92902 700 aa11.95□□□□□ -0.5
PDLIM7-211ENST00000504318 MARS2Q96GW9 593 aaKnown RBP11.95□□□□□ -0.5
PDLIM7-211ENST00000504318 CLPTM1LQ96KA5 538 aa11.95□□□□□ -0.5
PDLIM7-211ENST00000504318 Q96M85 177 aa11.95□□□□□ -0.5
PDLIM7-211ENST00000504318 CDRT15Q96T59 188 aa11.95□□□□□ -0.5
PDLIM7-211ENST00000504318 OR2H1Q9GZK4 316 aa11.95□□□□□ -0.5
PDLIM7-211ENST00000504318 MS4A5Q9H3V2 200 aa11.95□□□□□ -0.5
PDLIM7-211ENST00000504318 DCLRE1BQ9H816 532 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms